RNA–Protein interactions for RNA: ENST00000408541.1

RNU6ATAC11P-201, Transcript of RNA, U6atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU6ATAC11P, Length 125 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC11P-201ENST00000408541 RAPGEFL1Q9UHV5 662 aa0.83□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 ADGRL1O94910 1474 aa0.83□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 SETD1AO15047 1707 aaKnown RBP0.83□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 ZFHX4Q86UP3 3567 aa0.82□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 CECR2Q9BXF3 1484 aa0.82□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 KRT37O76014 449 aa0.82□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 ADRA2BP18089 450 aa0.82□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 KRTAP1-3Q8IUG1 177 aa0.82□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 EHMT2Q96KQ7 1210 aa0.82□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 RGS17Q9UGC6 210 aaPredicted RBP0.82□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 ATF5Q9Y2D1 282 aaPredicted RBP0.82□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 TRANK1O15050 2925 aa0.82□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 RP1L1Q8IWN7 2480 aaPredicted RBP0.82□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 RYR1P21817 5038 aa0.81□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.81□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 ACAP1Q15027 740 aa0.81□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 POTEAQ6S8J7 498 aa0.81□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 PRDM6Q9NQX0 595 aa0.81□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 COL6A3P12111 3177 aa0.81□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 SETXQ7Z333 2677 aaKnown RBP0.81□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 CACNA1GO43497 2377 aa0.81□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 MUC2Q02817 5179 aa0.8□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 ARHGEF11O15085 1522 aa0.8□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 KRTAP4-8A0A0G2JLE6 195 aa0.8□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 DCAF8L1A6NGE4 600 aa0.8□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 HSPA1LP34931 641 aa0.8□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 MAP3K11Q16584 847 aa0.8□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 TMEM121BQ9BXQ6 578 aaPredicted RBP0.8□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 KRTAP4-7Q9BYR0 210 aa0.8□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 KRTAP4-2Q9BYR5 136 aa0.8□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 USP19O94966 1318 aa0.8□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 ERCC6Q03468 1493 aa0.8□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 HYDINQ4G0P3 5121 aa0.79□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 HSPA6P17066 643 aa0.79□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 CACNB1Q02641 598 aaPredicted RBP0.79□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 PELP1Q8IZL8 1130 aaKnown RBP0.79□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 SERBP1Q8NC51 408 aaKnown RBP eCLIP0.79□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 SCAF1Q9H7N4 1312 aaKnown RBP0.79□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 TNRC18O15417 2968 aaPredicted RBP0.79□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 AATKQ6ZMQ8 1374 aa0.79□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 CEP164Q9UPV0 1460 aa0.79□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 FER1L4A9Z1Z3 1794 aa0.78□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 UBAP1LF5GYI3 381 aa0.78□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 MNX1P50219 401 aaPredicted RBP0.78□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 TRPM4Q8TD43 1214 aa0.78□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 COL25A1Q9BXS0 654 aaPredicted RBP0.78□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 SRPK3Q9UPE1 567 aa0.78□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 DNHD1Q96M86 4753 aa0.78□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 USP24Q9UPU5 2620 aa0.78□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 KIAA1210Q9ULL0 1709 aa0.78□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 ZNF462Q96JM2 2506 aa0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 FBN3Q75N90 2809 aa0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 KRTAP9-6A0A140TA67 174 aa0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 CCDC85CA6NKD9 419 aa0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 CYSRT1A8MQ03 144 aa0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 ZIC2O95409 532 aaPredicted RBP0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 PRPF38BQ5VTL8 546 aaKnown RBP0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 ALYREFQ86V81 257 aaKnown RBP0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 SPATA18Q8TC71 538 aa0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 NANOS1Q8WY41 292 aaKnown RBP0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 KHSRPQ92945 711 aaKnown RBP eCLIP0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 TRIM52Q96A61 297 aa0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 CFAP44Q96MT7 982 aa0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 SENP3Q9H4L4 574 aaPredicted RBP0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 ZSWIM6Q9HCJ5 1215 aa0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 BICRAQ9NZM4 1560 aa0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 LRP5O75197 1615 aa0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 BIRC6Q9NR09 4857 aa0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 PTPRTO14522 1441 aa0.76□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 RGS12O14924 1447 aa0.76□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 RGS19P49795 217 aa0.76□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 HSPA2P54652 639 aa0.76□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 PIP4K2BP78356 416 aa0.76□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 HABP4Q5JVS0 413 aaKnown RBP0.76□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 SP7Q8TDD2 431 aaPredicted RBP0.76□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 P2RX7Q99572 595 aaKnown RBP0.76□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 HNRNPABQ99729 332 aaKnown RBP0.76□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 KRTAP9-2Q9BYQ4 174 aa0.76□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 CHD6Q8TD26 2715 aa0.76□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 RYR3Q15413 4870 aa0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 HMGXB3Q12766 1538 aa0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 ARAP1Q96P48 1450 aa0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 LAMA2P24043 3122 aaKnown RBP0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 CNTNAP5Q8WYK1 1306 aa0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 BPTFQ12830 3046 aa0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 RGS20O76081 388 aa0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 KRTAP5-9P26371 169 aa0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 UBXN11Q5T124 520 aa0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 DNAJC5GQ8N7S2 189 aa0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 GCC1Q96CN9 775 aa0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 ABHD8Q96I13 439 aa0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 KRTAP4-8Q9BYQ9 185 aa0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 RALYQ9UKM9 306 aaKnown RBP0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 CHD8Q9HCK8 2581 aa0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 KDM5CP41229 1560 aa0.74□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 BAZ1AQ9NRL2 1556 aaPredicted RBP0.74□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 MAST4O15021 2626 aa0.74□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 YEATS2Q9ULM3 1422 aa0.74□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 EPPK1P58107 5090 aaKnown RBP0.74□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 TMEM265A0A087WTH1 108 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms