RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 CARMIL1Q5VZK9 1371 aa24.53■■□□□ 1.52
COL23A1-202ENST00000407622 MIER1Q8N108 512 aa24.48■■□□□ 1.51
COL23A1-202ENST00000407622 WDR62O43379 1518 aa24.48■■□□□ 1.51
COL23A1-202ENST00000407622 CCNB3Q8WWL7 1395 aa24.46■■□□□ 1.51
COL23A1-202ENST00000407622 GTF3C3Q9Y5Q9 886 aa24.46■■□□□ 1.51
COL23A1-202ENST00000407622 WDR97A6NE52 1622 aa24.45■■□□□ 1.5
COL23A1-202ENST00000407622 CLSPNQ9HAW4 1339 aa24.43■■□□□ 1.5
COL23A1-202ENST00000407622 TARBP1Q13395 1621 aaKnown RBP24.43■■□□□ 1.5
COL23A1-202ENST00000407622 TDRD9Q8NDG6 1382 aaKnown RBP24.43■■□□□ 1.5
COL23A1-202ENST00000407622 TIAM1Q13009 1591 aa24.42■■□□□ 1.5
COL23A1-202ENST00000407622 YTHDC1Q96MU7 727 aaKnown RBP24.41■■□□□ 1.5
COL23A1-202ENST00000407622 ITGAEP38570 1179 aa24.4■■□□□ 1.5
COL23A1-202ENST00000407622 THOC2Q8NI27 1593 aaKnown RBP24.39■■□□□ 1.49
COL23A1-202ENST00000407622 ABCA5Q8WWZ7 1642 aa24.36■■□□□ 1.49
COL23A1-202ENST00000407622 GAPVD1Q14C86 1478 aa24.35■■□□□ 1.49
COL23A1-202ENST00000407622 MAP3K1Q13233 1512 aa24.33■■□□□ 1.49
COL23A1-202ENST00000407622 P3H3Q8IVL6 736 aa24.33■■□□□ 1.48
COL23A1-202ENST00000407622 IFT140Q96RY7 1462 aa24.32■■□□□ 1.48
COL23A1-202ENST00000407622 LRRC9Q6ZRR7 1453 aa24.31■■□□□ 1.48
COL23A1-202ENST00000407622 PCF11O94913 1555 aaKnown RBP24.3■■□□□ 1.48
COL23A1-202ENST00000407622 PELP1Q8IZL8 1130 aaKnown RBP24.28■■□□□ 1.48
COL23A1-202ENST00000407622 PHLDB1Q86UU1 1377 aa24.28■■□□□ 1.48
COL23A1-202ENST00000407622 AQRO60306 1485 aaKnown RBP eCLIP24.27■■□□□ 1.48
COL23A1-202ENST00000407622 RAB3GAP2Q9H2M9 1393 aa24.26■■□□□ 1.47
COL23A1-202ENST00000407622 FHOD3Q2V2M9 1422 aa24.25■■□□□ 1.47
COL23A1-202ENST00000407622 CUL7Q14999 1698 aa24.25■■□□□ 1.47
COL23A1-202ENST00000407622 CFAP43Q8NDM7 1665 aa24.24■■□□□ 1.47
COL23A1-202ENST00000407622 FHAD1B1AJZ9 1412 aa24.24■■□□□ 1.47
COL23A1-202ENST00000407622 ZNF608Q9ULD9 1512 aaPredicted RBP24.23■■□□□ 1.47
COL23A1-202ENST00000407622 ATP1B4Q9UN42 357 aaPredicted RBP24.19■■□□□ 1.46
COL23A1-202ENST00000407622 MAPKBP1O60336 1514 aa24.19■■□□□ 1.46
COL23A1-202ENST00000407622 GRIN2BQ13224 1484 aa24.15■■□□□ 1.46
COL23A1-202ENST00000407622 FAM50AQ14320 339 aaKnown RBP24.15■■□□□ 1.46
COL23A1-202ENST00000407622 CTTNBP2Q8WZ74 1663 aa24.14■■□□□ 1.46
COL23A1-202ENST00000407622 PBRM1Q86U86 1689 aa24.14■■□□□ 1.45
COL23A1-202ENST00000407622 SETD5Q9C0A6 1442 aa24.13■■□□□ 1.45
COL23A1-202ENST00000407622 EFCAB5A4FU69 1503 aa24.13■■□□□ 1.45
COL23A1-202ENST00000407622 FYCO1Q9BQS8 1478 aa24.11■■□□□ 1.45
COL23A1-202ENST00000407622 CASKIN1Q8WXD9 1431 aa24.09■■□□□ 1.45
COL23A1-202ENST00000407622 EIF4G3O43432 1585 aaKnown RBP24.08■■□□□ 1.45
COL23A1-202ENST00000407622 ADAMTS12P58397 1594 aa24.04■■□□□ 1.44
COL23A1-202ENST00000407622 SNAPC4Q5SXM2 1469 aa24.01■■□□□ 1.43
COL23A1-202ENST00000407622 SIN3AQ96ST3 1273 aa23.99■■□□□ 1.43
COL23A1-202ENST00000407622 FMN1Q68DA7 1419 aa23.97■■□□□ 1.43
COL23A1-202ENST00000407622 LRRIQ1Q96JM4 1722 aa23.96■■□□□ 1.43
COL23A1-202ENST00000407622 SAMD9Q5K651 1589 aa23.95■■□□□ 1.42
COL23A1-202ENST00000407622 MAGI1Q96QZ7 1491 aaPredicted RBP23.93■■□□□ 1.42
COL23A1-202ENST00000407622 FGD6Q6ZV73 1430 aa23.91■■□□□ 1.42
COL23A1-202ENST00000407622 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.9■■□□□ 1.42
COL23A1-202ENST00000407622 MTUS2Q5JR59 1369 aa23.88■■□□□ 1.41
COL23A1-202ENST00000407622 GRIN2AQ12879 1464 aa23.86■■□□□ 1.41
COL23A1-202ENST00000407622 SYNJ2O15056 1496 aa23.85■■□□□ 1.41
COL23A1-202ENST00000407622 PTPRKQ15262 1439 aa23.85■■□□□ 1.41
COL23A1-202ENST00000407622 CHMP7Q8WUX9 453 aaPredicted RBP23.84■■□□□ 1.41
COL23A1-202ENST00000407622 NCOA2Q15596 1464 aa23.81■■□□□ 1.4
COL23A1-202ENST00000407622 FBLN2P98095 1184 aa23.79■■□□□ 1.4
COL23A1-202ENST00000407622 IQGAP2Q13576 1575 aa23.79■■□□□ 1.4
COL23A1-202ENST00000407622 KCNH8Q96L42 1107 aa23.78■■□□□ 1.4
COL23A1-202ENST00000407622 CCDC18Q5T9S5 1454 aa23.77■■□□□ 1.4
COL23A1-202ENST00000407622 KIAA0586Q9BVV6 1533 aa23.76■■□□□ 1.39
COL23A1-202ENST00000407622 MYOM3Q5VTT5 1437 aa23.76■■□□□ 1.39
COL23A1-202ENST00000407622 MAGI3Q5TCQ9 1506 aa23.75■■□□□ 1.39
COL23A1-202ENST00000407622 PTPN23Q9H3S7 1636 aa23.75■■□□□ 1.39
COL23A1-202ENST00000407622 HFM1A2PYH4 1435 aa23.74■■□□□ 1.39
COL23A1-202ENST00000407622 SUPT6HQ7KZ85 1726 aaKnown RBP23.74■■□□□ 1.39
COL23A1-202ENST00000407622 EHBP1L1Q8N3D4 1523 aa23.73■■□□□ 1.39
COL23A1-202ENST00000407622 PPP1R15AO75807 674 aaPredicted RBP23.72■■□□□ 1.39
COL23A1-202ENST00000407622 HIRIP3Q9BW71 556 aaPredicted RBP23.72■■□□□ 1.39
COL23A1-202ENST00000407622 DDX10Q13206 875 aaKnown RBP23.72■■□□□ 1.39
COL23A1-202ENST00000407622 TIMELESSQ9UNS1 1208 aa23.71■■□□□ 1.39
COL23A1-202ENST00000407622 CEP170Q5SW79 1584 aa23.7■■□□□ 1.38
COL23A1-202ENST00000407622 NUP160Q12769 1436 aa23.69■■□□□ 1.38
COL23A1-202ENST00000407622 NAIPQ13075 1403 aa23.69■■□□□ 1.38
COL23A1-202ENST00000407622 UGGT2Q9NYU1 1516 aa23.69■■□□□ 1.38
COL23A1-202ENST00000407622 UACAQ9BZF9 1416 aa23.68■■□□□ 1.38
COL23A1-202ENST00000407622 ARHGEF11O15085 1522 aa23.67■■□□□ 1.38
COL23A1-202ENST00000407622 TONSLQ96HA7 1378 aa23.61■■□□□ 1.37
COL23A1-202ENST00000407622 HECW1Q76N89 1606 aa23.61■■□□□ 1.37
COL23A1-202ENST00000407622 SUPT16HQ9Y5B9 1047 aaKnown RBP23.6■■□□□ 1.37
COL23A1-202ENST00000407622 CDK13Q14004 1512 aaKnown RBP23.6■■□□□ 1.37
COL23A1-202ENST00000407622 EPRSP07814 1512 aaKnown RBP23.59■■□□□ 1.37
COL23A1-202ENST00000407622 DISP1Q96F81 1524 aa23.59■■□□□ 1.37
COL23A1-202ENST00000407622 ARID3CA6NKF2 412 aa23.59■■□□□ 1.37
COL23A1-202ENST00000407622 RRP7BPQ9NSQ0 103 aa23.58■■□□□ 1.36
COL23A1-202ENST00000407622 CHIC2Q9UKJ5 165 aa23.58■■□□□ 1.36
COL23A1-202ENST00000407622 JPH4Q96JJ6 628 aa23.56■■□□□ 1.36
COL23A1-202ENST00000407622 TCOF1Q13428 1488 aaKnown RBP23.55■■□□□ 1.36
COL23A1-202ENST00000407622 CHD1O14646 1710 aa23.54■■□□□ 1.36
COL23A1-202ENST00000407622 KIAA0556O60303 1618 aa23.54■■□□□ 1.36
COL23A1-202ENST00000407622 KDM5BQ9UGL1 1544 aa23.53■■□□□ 1.36
COL23A1-202ENST00000407622 KDM6BO15054 1643 aa23.52■■□□□ 1.36
COL23A1-202ENST00000407622 DENND4BO75064 1496 aaPredicted RBP23.51■■□□□ 1.35
COL23A1-202ENST00000407622 GCC2Q8IWJ2 1684 aa23.51■■□□□ 1.35
COL23A1-202ENST00000407622 CARMIL2Q6F5E8 1435 aa23.45■■□□□ 1.34
COL23A1-202ENST00000407622 MIA2Q96PC5 1412 aa23.42■■□□□ 1.34
COL23A1-202ENST00000407622 TRIM52Q96A61 297 aa23.42■■□□□ 1.34
COL23A1-202ENST00000407622 AKNAQ7Z591 1439 aa23.41■■□□□ 1.34
COL23A1-202ENST00000407622 ANP32CO43423 234 aa23.4■■□□□ 1.34
COL23A1-202ENST00000407622 PRG4Q92954 1404 aaPredicted RBP23.38■■□□□ 1.33
COL23A1-202ENST00000407622 CCER2I3L3R5 266 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms