RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 ARAP1Q96P48 1450 aa24.09■■□□□ 1.45
CDK11B-204ENST00000407249 CUL7Q14999 1698 aa24.08■■□□□ 1.44
CDK11B-204ENST00000407249 HNRNPUL2Q1KMD3 747 aaKnown RBP24.07■■□□□ 1.44
CDK11B-204ENST00000407249 KIF21AQ7Z4S6 1674 aa24.06■■□□□ 1.44
CDK11B-204ENST00000407249 RAD54L2Q9Y4B4 1467 aa24.06■■□□□ 1.44
CDK11B-204ENST00000407249 MIER1Q8N108 512 aa24.05■■□□□ 1.44
CDK11B-204ENST00000407249 YTHDC1Q96MU7 727 aaKnown RBP24.05■■□□□ 1.44
CDK11B-204ENST00000407249 EIF5BO60841 1220 aaKnown RBP24■■□□□ 1.43
CDK11B-204ENST00000407249 ARHGAP35Q9NRY4 1499 aa23.98■■□□□ 1.43
CDK11B-204ENST00000407249 ABCA5Q8WWZ7 1642 aa23.98■■□□□ 1.43
CDK11B-204ENST00000407249 RANGAP1P46060 587 aaPredicted RBP23.91■■□□□ 1.42
CDK11B-204ENST00000407249 MRC2Q9UBG0 1479 aa23.9■■□□□ 1.42
CDK11B-204ENST00000407249 TARBP1Q13395 1621 aaKnown RBP23.87■■□□□ 1.41
CDK11B-204ENST00000407249 GAPVD1Q14C86 1478 aa23.86■■□□□ 1.41
CDK11B-204ENST00000407249 CTTNBP2Q8WZ74 1663 aa23.86■■□□□ 1.41
CDK11B-204ENST00000407249 EFCAB5A4FU69 1503 aa23.85■■□□□ 1.41
CDK11B-204ENST00000407249 MAP3K1Q13233 1512 aa23.83■■□□□ 1.41
CDK11B-204ENST00000407249 FHAD1B1AJZ9 1412 aa23.79■■□□□ 1.4
CDK11B-204ENST00000407249 CLSPNQ9HAW4 1339 aa23.78■■□□□ 1.4
CDK11B-204ENST00000407249 TDRD9Q8NDG6 1382 aaKnown RBP23.76■■□□□ 1.39
CDK11B-204ENST00000407249 WDR62O43379 1518 aa23.76■■□□□ 1.39
CDK11B-204ENST00000407249 PBRM1Q86U86 1689 aa23.72■■□□□ 1.39
CDK11B-204ENST00000407249 TIAM1Q13009 1591 aa23.7■■□□□ 1.38
CDK11B-204ENST00000407249 IFT140Q96RY7 1462 aa23.7■■□□□ 1.38
CDK11B-204ENST00000407249 DHX57Q6P158 1386 aaKnown RBP23.7■■□□□ 1.38
CDK11B-204ENST00000407249 AQRO60306 1485 aaKnown RBP eCLIP23.68■■□□□ 1.384e-7■■■■■ 29.4
CDK11B-204ENST00000407249 UBE2Q2Q8WVN8 375 aa23.66■■□□□ 1.38
CDK11B-204ENST00000407249 CFAP43Q8NDM7 1665 aa23.66■■□□□ 1.38
CDK11B-204ENST00000407249 RRBP1Q9P2E9 1410 aaKnown RBP23.65■■□□□ 1.38
CDK11B-204ENST00000407249 FYCO1Q9BQS8 1478 aa23.64■■□□□ 1.38
CDK11B-204ENST00000407249 SAMD9Q5K651 1589 aa23.63■■□□□ 1.37
CDK11B-204ENST00000407249 PCF11O94913 1555 aaKnown RBP23.63■■□□□ 1.37
CDK11B-204ENST00000407249 ADAMTS12P58397 1594 aa23.63■■□□□ 1.37
CDK11B-204ENST00000407249 KANK4Q5T7N3 995 aaPredicted RBP23.63■■□□□ 1.37
CDK11B-204ENST00000407249 GRIN2BQ13224 1484 aa23.62■■□□□ 1.37
CDK11B-204ENST00000407249 FMN1Q68DA7 1419 aa23.6■■□□□ 1.37
CDK11B-204ENST00000407249 CASKIN1Q8WXD9 1431 aa23.6■■□□□ 1.37
CDK11B-204ENST00000407249 FHOD3Q2V2M9 1422 aa23.57■■□□□ 1.36
CDK11B-204ENST00000407249 ERCC6Q03468 1493 aa23.57■■□□□ 1.36
CDK11B-204ENST00000407249 LRRC9Q6ZRR7 1453 aa23.57■■□□□ 1.36
CDK11B-204ENST00000407249 THOC2Q8NI27 1593 aaKnown RBP23.56■■□□□ 1.36
CDK11B-204ENST00000407249 ANO8Q9HCE9 1232 aaPredicted RBP23.56■■□□□ 1.36
CDK11B-204ENST00000407249 CCNB3Q8WWL7 1395 aa23.5■■□□□ 1.35
CDK11B-204ENST00000407249 SUPT16HQ9Y5B9 1047 aaKnown RBP23.48■■□□□ 1.35
CDK11B-204ENST00000407249 SNAPC4Q5SXM2 1469 aa23.48■■□□□ 1.35
CDK11B-204ENST00000407249 IQGAP2Q13576 1575 aa23.48■■□□□ 1.35
CDK11B-204ENST00000407249 P3H3Q8IVL6 736 aa23.46■■□□□ 1.35
CDK11B-204ENST00000407249 EIF4G3O43432 1585 aaKnown RBP23.45■■□□□ 1.34
CDK11B-204ENST00000407249 ZNF608Q9ULD9 1512 aaPredicted RBP23.45■■□□□ 1.34
CDK11B-204ENST00000407249 PLEKHG5O94827 1062 aa23.43■■□□□ 1.34
CDK11B-204ENST00000407249 UGGT2Q9NYU1 1516 aa23.39■■□□□ 1.33
CDK11B-204ENST00000407249 MAGI1Q96QZ7 1491 aaPredicted RBP23.39■■□□□ 1.33
CDK11B-204ENST00000407249 KIAA0586Q9BVV6 1533 aa23.34■■□□□ 1.33
CDK11B-204ENST00000407249 GRIN2AQ12879 1464 aa23.33■■□□□ 1.33
CDK11B-204ENST00000407249 CCDC18Q5T9S5 1454 aa23.33■■□□□ 1.33
CDK11B-204ENST00000407249 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.33■■□□□ 1.33
CDK11B-204ENST00000407249 PHLDB1Q86UU1 1377 aa23.33■■□□□ 1.32
CDK11B-204ENST00000407249 HECW1Q76N89 1606 aa23.32■■□□□ 1.32
CDK11B-204ENST00000407249 ATP1B4Q9UN42 357 aaPredicted RBP23.3■■□□□ 1.32
CDK11B-204ENST00000407249 EHBP1L1Q8N3D4 1523 aa23.29■■□□□ 1.32
CDK11B-204ENST00000407249 LRRIQ1Q96JM4 1722 aa23.29■■□□□ 1.32
CDK11B-204ENST00000407249 SYNJ2O15056 1496 aa23.27■■□□□ 1.32
CDK11B-204ENST00000407249 MTUS2Q5JR59 1369 aa23.25■■□□□ 1.31
CDK11B-204ENST00000407249 RAB3GAP2Q9H2M9 1393 aa23.24■■□□□ 1.31
CDK11B-204ENST00000407249 ITGAEP38570 1179 aa23.24■■□□□ 1.31
CDK11B-204ENST00000407249 KIAA0556O60303 1618 aa23.23■■□□□ 1.31
CDK11B-204ENST00000407249 SUPT6HQ7KZ85 1726 aaKnown RBP23.23■■□□□ 1.31
CDK11B-204ENST00000407249 MAPKBP1O60336 1514 aa23.22■■□□□ 1.31
CDK11B-204ENST00000407249 TSHZ2Q9NRE2 1034 aa23.21■■□□□ 1.31
CDK11B-204ENST00000407249 KCNH8Q96L42 1107 aa23.18■■□□□ 1.3
CDK11B-204ENST00000407249 FGD6Q6ZV73 1430 aa23.18■■□□□ 1.3
CDK11B-204ENST00000407249 DISP1Q96F81 1524 aa23.17■■□□□ 1.3
CDK11B-204ENST00000407249 NCOA2Q15596 1464 aa23.16■■□□□ 1.3
CDK11B-204ENST00000407249 ARHGEF11O15085 1522 aa23.16■■□□□ 1.3
CDK11B-204ENST00000407249 EPRSP07814 1512 aaKnown RBP23.15■■□□□ 1.3
CDK11B-204ENST00000407249 SETD5Q9C0A6 1442 aa23.15■■□□□ 1.3
CDK11B-204ENST00000407249 CEP170Q5SW79 1584 aa23.15■■□□□ 1.3
CDK11B-204ENST00000407249 PODXL2Q9NZ53 605 aa23.15■■□□□ 1.3
CDK11B-204ENST00000407249 NUP160Q12769 1436 aa23.14■■□□□ 1.3
CDK11B-204ENST00000407249 MYOM3Q5VTT5 1437 aa23.13■■□□□ 1.29
CDK11B-204ENST00000407249 DNAJC5Q9H3Z4 198 aa23.13■■□□□ 1.29
CDK11B-204ENST00000407249 CHMP7Q8WUX9 453 aaPredicted RBP23.12■■□□□ 1.29
CDK11B-204ENST00000407249 FAM50AQ14320 339 aaKnown RBP23.12■■□□□ 1.29
CDK11B-204ENST00000407249 MAGI3Q5TCQ9 1506 aa23.08■■□□□ 1.28
CDK11B-204ENST00000407249 RAPGEF6Q8TEU7 1601 aa23.07■■□□□ 1.28
CDK11B-204ENST00000407249 PKNOX2Q96KN3 472 aa23.07■■□□□ 1.28
CDK11B-204ENST00000407249 CARMIL2Q6F5E8 1435 aa23.04■■□□□ 1.28
CDK11B-204ENST00000407249 DDX10Q13206 875 aaKnown RBP23.03■■□□□ 1.28
CDK11B-204ENST00000407249 TCOF1Q13428 1488 aaKnown RBP23.03■■□□□ 1.28
CDK11B-204ENST00000407249 PTPN23Q9H3S7 1636 aa23.02■■□□□ 1.28
CDK11B-204ENST00000407249 SIN3AQ96ST3 1273 aa23.02■■□□□ 1.28
CDK11B-204ENST00000407249 CDK13Q14004 1512 aaKnown RBP23.01■■□□□ 1.27
CDK11B-204ENST00000407249 SALL2Q9Y467 1007 aaPredicted RBP23.01■■□□□ 1.27
CDK11B-204ENST00000407249 TIMELESSQ9UNS1 1208 aa23■■□□□ 1.27
CDK11B-204ENST00000407249 MIA2Q96PC5 1412 aa23■■□□□ 1.27
CDK11B-204ENST00000407249 PPP1R15AO75807 674 aaPredicted RBP22.99■■□□□ 1.27
CDK11B-204ENST00000407249 NUP153P49790 1475 aaKnown RBP22.99■■□□□ 1.27
CDK11B-204ENST00000407249 HFM1A2PYH4 1435 aa22.95■■□□□ 1.26
CDK11B-204ENST00000407249 FKBP8Q14318 412 aa22.95■■□□□ 1.26
CDK11B-204ENST00000407249 BCANQ96GW7 911 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms