RNA–Protein interactions for RNA: ENST00000407008.7

NLK-201, Transcript of nemo like kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLK, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-201ENST00000407008 PRDM2Q13029 1718 aa12.17□□□□□ -0.46
NLK-201ENST00000407008 RAD54L2Q9Y4B4 1467 aa12.16□□□□□ -0.46
NLK-201ENST00000407008 PRXQ9BXM0 1461 aa12.15□□□□□ -0.46
NLK-201ENST00000407008 ABCA10Q8WWZ4 1543 aa12.14□□□□□ -0.47
NLK-201ENST00000407008 MTUS2Q5JR59 1369 aa12.14□□□□□ -0.47
NLK-201ENST00000407008 IFT140Q96RY7 1462 aa12.13□□□□□ -0.47
NLK-201ENST00000407008 FMN1Q68DA7 1419 aa12.13□□□□□ -0.47
NLK-201ENST00000407008 GRIN2BQ13224 1484 aa12.09□□□□□ -0.47
NLK-201ENST00000407008 DNAJC5BQ9UF47 199 aa12.07□□□□□ -0.48
NLK-201ENST00000407008 CARMIL2Q6F5E8 1435 aa12.07□□□□□ -0.48
NLK-201ENST00000407008 URB2Q14146 1524 aaKnown RBP12.06□□□□□ -0.48
NLK-201ENST00000407008 CUL7Q14999 1698 aa12.05□□□□□ -0.48
NLK-201ENST00000407008 EFCAB5A4FU69 1503 aa12.01□□□□□ -0.49
NLK-201ENST00000407008 ACIN1Q9UKV3 1341 aaKnown RBP12.01□□□□□ -0.49
NLK-201ENST00000407008 AQRO60306 1485 aaKnown RBP eCLIP12□□□□□ -0.492e-6■■■■■ 34.3
NLK-201ENST00000407008 ARID3CA6NKF2 412 aa12□□□□□ -0.49
NLK-201ENST00000407008 FHOD3Q2V2M9 1422 aa11.99□□□□□ -0.49
NLK-201ENST00000407008 PLEKHD1A6NEE1 506 aa11.97□□□□□ -0.49
NLK-201ENST00000407008 CCNB3Q8WWL7 1395 aa11.97□□□□□ -0.49
NLK-201ENST00000407008 NPM1P06748 294 aaKnown RBP eCLIP11.96□□□□□ -0.5
NLK-201ENST00000407008 MYT1LQ9UL68 1186 aa11.95□□□□□ -0.5
NLK-201ENST00000407008 ARHGAP35Q9NRY4 1499 aa11.95□□□□□ -0.5
NLK-201ENST00000407008 TRIM52Q96A61 297 aa11.94□□□□□ -0.5
NLK-201ENST00000407008 KIF21AQ7Z4S6 1674 aa11.93□□□□□ -0.5
NLK-201ENST00000407008 JPH4Q96JJ6 628 aa11.92□□□□□ -0.5
NLK-201ENST00000407008 MAGI1Q96QZ7 1491 aaPredicted RBP11.91□□□□□ -0.5
NLK-201ENST00000407008 ARAP1Q96P48 1450 aa11.91□□□□□ -0.5
NLK-201ENST00000407008 ZNF777Q9ULD5 760 aaPredicted RBP11.91□□□□□ -0.5
NLK-201ENST00000407008 SNAPC4Q5SXM2 1469 aa11.9□□□□□ -0.5
NLK-201ENST00000407008 CASKIN1Q8WXD9 1431 aa11.9□□□□□ -0.5
NLK-201ENST00000407008 KANK4Q5T7N3 995 aaPredicted RBP11.9□□□□□ -0.5
NLK-201ENST00000407008 FYCO1Q9BQS8 1478 aa11.9□□□□□ -0.5
NLK-201ENST00000407008 WDR62O43379 1518 aa11.89□□□□□ -0.51
NLK-201ENST00000407008 WDR97A6NE52 1622 aa11.89□□□□□ -0.51
NLK-201ENST00000407008 CLSPNQ9HAW4 1339 aa11.88□□□□□ -0.51
NLK-201ENST00000407008 CCDC18Q5T9S5 1454 aa11.88□□□□□ -0.51
NLK-201ENST00000407008 KIAA0586Q9BVV6 1533 aa11.87□□□□□ -0.51
NLK-201ENST00000407008 TSPY4P0CV99 314 aa11.87□□□□□ -0.51
NLK-201ENST00000407008 TSPY10P0CW01 314 aa11.87□□□□□ -0.51
NLK-201ENST00000407008 SYNJ2O15056 1496 aa11.86□□□□□ -0.51
NLK-201ENST00000407008 CFDP1Q9UEE9 299 aaPredicted RBP11.85□□□□□ -0.51
NLK-201ENST00000407008 IQGAP2Q13576 1575 aa11.85□□□□□ -0.51
NLK-201ENST00000407008 GRIN2AQ12879 1464 aa11.83□□□□□ -0.52
NLK-201ENST00000407008 MAP3K1Q13233 1512 aa11.83□□□□□ -0.52
NLK-201ENST00000407008 ABCA5Q8WWZ7 1642 aa11.82□□□□□ -0.52
NLK-201ENST00000407008 LRRC9Q6ZRR7 1453 aa11.82□□□□□ -0.52
NLK-201ENST00000407008 PTPRGP23470 1445 aa11.81□□□□□ -0.52
NLK-201ENST00000407008 ZNF608Q9ULD9 1512 aaPredicted RBP11.81□□□□□ -0.52
NLK-201ENST00000407008 NEUROD1Q13562 356 aa11.81□□□□□ -0.52
NLK-201ENST00000407008 CENPBP07199 599 aaPredicted RBP11.81□□□□□ -0.52
NLK-201ENST00000407008 CTTNBP2Q8WZ74 1663 aa11.79□□□□□ -0.52
NLK-201ENST00000407008 TIAM1Q13009 1591 aa11.79□□□□□ -0.52
NLK-201ENST00000407008 CHIC2Q9UKJ5 165 aa11.79□□□□□ -0.52
NLK-201ENST00000407008 ADAMTS12P58397 1594 aa11.79□□□□□ -0.52
NLK-201ENST00000407008 HECW1Q76N89 1606 aa11.78□□□□□ -0.52
NLK-201ENST00000407008 SETD5Q9C0A6 1442 aa11.78□□□□□ -0.52
NLK-201ENST00000407008 TONSLQ96HA7 1378 aa11.77□□□□□ -0.52
NLK-201ENST00000407008 ZNF316A6NFI3 1004 aaPredicted RBP11.77□□□□□ -0.53
NLK-201ENST00000407008 TARBP1Q13395 1621 aaKnown RBP11.76□□□□□ -0.53
NLK-201ENST00000407008 EHBP1L1Q8N3D4 1523 aa11.75□□□□□ -0.53
NLK-201ENST00000407008 PBRM1Q86U86 1689 aa11.75□□□□□ -0.53
NLK-201ENST00000407008 KCNH8Q96L42 1107 aa11.75□□□□□ -0.53
NLK-201ENST00000407008 EIF4G3O43432 1585 aaKnown RBP11.74□□□□□ -0.53
NLK-201ENST00000407008 DIEXFQ68CQ4 756 aaKnown RBP11.74□□□□□ -0.53
NLK-201ENST00000407008 RRP7BPQ9NSQ0 103 aa11.74□□□□□ -0.53
NLK-201ENST00000407008 RRBP1Q9P2E9 1410 aaKnown RBP11.74□□□□□ -0.53
NLK-201ENST00000407008 PCF11O94913 1555 aaKnown RBP11.73□□□□□ -0.53
NLK-201ENST00000407008 MYOM3Q5VTT5 1437 aa11.73□□□□□ -0.53
NLK-201ENST00000407008 OSCARQ8IYS5 282 aa11.73□□□□□ -0.53
NLK-201ENST00000407008 THOC2Q8NI27 1593 aaKnown RBP11.72□□□□□ -0.53
NLK-201ENST00000407008 PRG4Q92954 1404 aaPredicted RBP11.72□□□□□ -0.53
NLK-201ENST00000407008 RSPH4AQ5TD94 716 aa11.71□□□□□ -0.53
NLK-201ENST00000407008 FGD6Q6ZV73 1430 aa11.71□□□□□ -0.53
NLK-201ENST00000407008 TIMELESSQ9UNS1 1208 aa11.7□□□□□ -0.54
NLK-201ENST00000407008 NCOA2Q15596 1464 aa11.7□□□□□ -0.54
NLK-201ENST00000407008 UGGT2Q9NYU1 1516 aa11.69□□□□□ -0.54
NLK-201ENST00000407008 RAB3GAP2Q9H2M9 1393 aa11.69□□□□□ -0.54
NLK-201ENST00000407008 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.68□□□□□ -0.54
NLK-201ENST00000407008 PHLDB1Q86UU1 1377 aa11.68□□□□□ -0.54
NLK-201ENST00000407008 SUPT6HQ7KZ85 1726 aaKnown RBP11.67□□□□□ -0.54
NLK-201ENST00000407008 EFCAB2Q5VUJ9 269 aa11.67□□□□□ -0.54
NLK-201ENST00000407008 SLC4A1APQ9BWU0 796 aaKnown RBP11.67□□□□□ -0.54
NLK-201ENST00000407008 EPRSP07814 1512 aaKnown RBP11.67□□□□□ -0.54
NLK-201ENST00000407008 ANKRD30AQ9BXX3 1397 aa11.67□□□□□ -0.54
NLK-201ENST00000407008 DAXXQ9UER7 740 aaPredicted RBP11.67□□□□□ -0.54
NLK-201ENST00000407008 MIA2Q96PC5 1412 aa11.66□□□□□ -0.54
NLK-201ENST00000407008 TROQ12816 1431 aaPredicted RBP11.66□□□□□ -0.54
NLK-201ENST00000407008 NUP160Q12769 1436 aa11.63□□□□□ -0.55
NLK-201ENST00000407008 SAMD9Q5K651 1589 aa11.61□□□□□ -0.55
NLK-201ENST00000407008 KIAA0556O60303 1618 aa11.61□□□□□ -0.55
NLK-201ENST00000407008 UACAQ9BZF9 1416 aa11.61□□□□□ -0.55
NLK-201ENST00000407008 CFAP43Q8NDM7 1665 aa11.6□□□□□ -0.55
NLK-201ENST00000407008 DHX57Q6P158 1386 aaKnown RBP11.59□□□□□ -0.55
NLK-201ENST00000407008 ZNF326Q5BKZ1 582 aaKnown RBP11.59□□□□□ -0.55
NLK-201ENST00000407008 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.59□□□□□ -0.55
NLK-201ENST00000407008 RAPGEF6Q8TEU7 1601 aa11.58□□□□□ -0.56
NLK-201ENST00000407008 CDK13Q14004 1512 aaKnown RBP11.58□□□□□ -0.56
NLK-201ENST00000407008 POLR3GLQ9BT43 218 aa11.56□□□□□ -0.56
NLK-201ENST00000407008 GTF3C3Q9Y5Q9 886 aa11.56□□□□□ -0.56
NLK-201ENST00000407008 PLB1Q6P1J6 1458 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms