RNA–Protein interactions for RNA: ENST00000406785.6

SLC8A1-207, Transcript of solute carrier family 8 member A1, humanhuman

TSL 1 (best) BASIC

Gene SLC8A1, Length 20,987 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC8A1-207ENST00000406785 VPS8Q8N3P4 1428 aa4.49□□□□□ -1.69
SLC8A1-207ENST00000406785 CFAP44Q96MT7 982 aa4.49□□□□□ -1.69
SLC8A1-207ENST00000406785 UNC13AQ9UPW8 1703 aa4.49□□□□□ -1.69
SLC8A1-207ENST00000406785 KAT6BQ8WYB5 2073 aa4.49□□□□□ -1.69
SLC8A1-207ENST00000406785 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.49□□□□□ -1.69
SLC8A1-207ENST00000406785 ITSN2Q9NZM3 1697 aa4.48□□□□□ -1.69
SLC8A1-207ENST00000406785 ZBTB7CA1YPR0 619 aa4.48□□□□□ -1.69
SLC8A1-207ENST00000406785 CTTNBP2Q8WZ74 1663 aa4.48□□□□□ -1.69
SLC8A1-207ENST00000406785 EFCAB5A4FU69 1503 aa4.48□□□□□ -1.69
SLC8A1-207ENST00000406785 FMN1Q68DA7 1419 aa4.48□□□□□ -1.69
SLC8A1-207ENST00000406785 SUPT6HQ7KZ85 1726 aaKnown RBP4.48□□□□□ -1.69
SLC8A1-207ENST00000406785 PHLDB1Q86UU1 1377 aa4.47□□□□□ -1.69
SLC8A1-207ENST00000406785 BCL11AQ9H165 835 aa4.47□□□□□ -1.69
SLC8A1-207ENST00000406785 DDRGK1Q96HY6 314 aa4.47□□□□□ -1.69
SLC8A1-207ENST00000406785 CHMP4BQ9H444 224 aaKnown RBP4.47□□□□□ -1.69
SLC8A1-207ENST00000406785 ARID3AQ99856 593 aa4.47□□□□□ -1.69
SLC8A1-207ENST00000406785 CC2D2AQ9P2K1 1620 aa4.47□□□□□ -1.69
SLC8A1-207ENST00000406785 HMGXB3Q12766 1538 aa4.47□□□□□ -1.69
SLC8A1-207ENST00000406785 CSRNP3Q8WYN3 585 aa4.47□□□□□ -1.69
SLC8A1-207ENST00000406785 PNNQ9H307 717 aaKnown RBP4.47□□□□□ -1.69
SLC8A1-207ENST00000406785 SCAF1Q9H7N4 1312 aaKnown RBP4.46□□□□□ -1.69
SLC8A1-207ENST00000406785 PKNOX2Q96KN3 472 aa4.46□□□□□ -1.7
SLC8A1-207ENST00000406785 ARHGAP35Q9NRY4 1499 aa4.46□□□□□ -1.7
SLC8A1-207ENST00000406785 SCAPERQ9BY12 1400 aa4.45□□□□□ -1.7
SLC8A1-207ENST00000406785 CCDC18Q5T9S5 1454 aa4.45□□□□□ -1.7
SLC8A1-207ENST00000406785 WIZO95785 1651 aa4.45□□□□□ -1.7
SLC8A1-207ENST00000406785 ROCK2O75116 1388 aaKnown RBP4.45□□□□□ -1.7
SLC8A1-207ENST00000406785 THOC2Q8NI27 1593 aaKnown RBP4.45□□□□□ -1.7
SLC8A1-207ENST00000406785 NBR1Q14596 966 aa4.45□□□□□ -1.7
SLC8A1-207ENST00000406785 MTUS2Q5JR59 1369 aa4.44□□□□□ -1.7
SLC8A1-207ENST00000406785 CCDC136Q96JN2 1154 aa4.44□□□□□ -1.7
SLC8A1-207ENST00000406785 POLR1AO95602 1720 aaPredicted RBP4.44□□□□□ -1.7
SLC8A1-207ENST00000406785 CDCA8Q53HL2 280 aa4.44□□□□□ -1.7
SLC8A1-207ENST00000406785 BECN1Q14457 450 aa4.44□□□□□ -1.7
SLC8A1-207ENST00000406785 GOLGA6L22H0YM25 854 aa4.43□□□□□ -1.7
SLC8A1-207ENST00000406785 TPRNQ4KMQ1 711 aa4.43□□□□□ -1.7
SLC8A1-207ENST00000406785 PPARGC1BQ86YN6 1023 aaKnown RBP4.43□□□□□ -1.7
SLC8A1-207ENST00000406785 L1TD1Q5T7N2 865 aaKnown RBP4.43□□□□□ -1.7
SLC8A1-207ENST00000406785 HECW1Q76N89 1606 aa4.43□□□□□ -1.7
SLC8A1-207ENST00000406785 CFAP43Q8NDM7 1665 aa4.43□□□□□ -1.7
SLC8A1-207ENST00000406785 BIVM-ERCC5R4GMW8 1640 aa4.43□□□□□ -1.7
SLC8A1-207ENST00000406785 HAP1P54257 671 aaPredicted RBP4.42□□□□□ -1.7
SLC8A1-207ENST00000406785 MS4A1P11836 297 aa4.42□□□□□ -1.7
SLC8A1-207ENST00000406785 PEG3Q9GZU2 1588 aa4.42□□□□□ -1.7
SLC8A1-207ENST00000406785 TOP2BQ02880 1626 aa4.42□□□□□ -1.7
SLC8A1-207ENST00000406785 CANXP27824 592 aaKnown RBP4.41□□□□□ -1.7
SLC8A1-207ENST00000406785 GOLGA6L6A8MZA4 724 aa4.41□□□□□ -1.7
SLC8A1-207ENST00000406785 EIF3AQ14152 1382 aaKnown RBP4.41□□□□□ -1.7
SLC8A1-207ENST00000406785 KTN1Q86UP2 1357 aaKnown RBP4.41□□□□□ -1.7
SLC8A1-207ENST00000406785 FBXO3Q9UK99 471 aa4.41□□□□□ -1.7
SLC8A1-207ENST00000406785 TULP1O00294 542 aaPredicted RBP4.4□□□□□ -1.7
SLC8A1-207ENST00000406785 CCNB3Q8WWL7 1395 aa4.4□□□□□ -1.7
SLC8A1-207ENST00000406785 GOLGA6L3A6NEY3 463 aa4.4□□□□□ -1.7
SLC8A1-207ENST00000406785 PPM1GO15355 546 aaPredicted RBP4.4□□□□□ -1.7
SLC8A1-207ENST00000406785 MAP3K1Q13233 1512 aa4.4□□□□□ -1.7
SLC8A1-207ENST00000406785 FYCO1Q9BQS8 1478 aa4.4□□□□□ -1.71
SLC8A1-207ENST00000406785 HNRNPUL2Q1KMD3 747 aaKnown RBP4.4□□□□□ -1.71
SLC8A1-207ENST00000406785 WDR97A6NE52 1622 aa4.4□□□□□ -1.71
SLC8A1-207ENST00000406785 MTERF4Q7Z6M4 381 aaKnown RBP4.4□□□□□ -1.71
SLC8A1-207ENST00000406785 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.39□□□□□ -1.71
SLC8A1-207ENST00000406785 FAM50AQ14320 339 aaKnown RBP4.39□□□□□ -1.71
SLC8A1-207ENST00000406785 CHMP4AQ9BY43 222 aa4.39□□□□□ -1.71
SLC8A1-207ENST00000406785 EHBP1L1Q8N3D4 1523 aa4.39□□□□□ -1.71
SLC8A1-207ENST00000406785 NRDCO43847 1150 aa4.39□□□□□ -1.71
SLC8A1-207ENST00000406785 NGEFQ8N5V2 710 aa4.39□□□□□ -1.71
SLC8A1-207ENST00000406785 MYH16Q9H6N6 1097 aa4.38□□□□□ -1.71
SLC8A1-207ENST00000406785 UACAQ9BZF9 1416 aa4.38□□□□□ -1.71
SLC8A1-207ENST00000406785 HSP90AA1P07900 732 aaKnown RBP4.38□□□□□ -1.71
SLC8A1-207ENST00000406785 TAF3Q5VWG9 929 aa4.38□□□□□ -1.71
SLC8A1-207ENST00000406785 NESP48681 1621 aa4.38□□□□□ -1.71
SLC8A1-207ENST00000406785 ADGBQ8N7X0 1667 aa4.37□□□□□ -1.71
SLC8A1-207ENST00000406785 ZNF526Q8TF50 670 aaPredicted RBP4.37□□□□□ -1.71
SLC8A1-207ENST00000406785 GOLGA6L1Q8N7Z2 621 aa4.37□□□□□ -1.71
SLC8A1-207ENST00000406785 HIRIP3Q9BW71 556 aaPredicted RBP4.37□□□□□ -1.71
SLC8A1-207ENST00000406785 PLEKHH2Q8IVE3 1493 aa4.37□□□□□ -1.71
SLC8A1-207ENST00000406785 CCER2I3L3R5 266 aa4.36□□□□□ -1.71
SLC8A1-207ENST00000406785 MEX3CQ5U5Q3 659 aaKnown RBP4.36□□□□□ -1.71
SLC8A1-207ENST00000406785 AAMPQ13685 434 aa4.36□□□□□ -1.71
SLC8A1-207ENST00000406785 EIF3DO15371 548 aaKnown RBP eCLIP4.36□□□□□ -1.71
SLC8A1-207ENST00000406785 NCBP3Q53F19 620 aaKnown RBP4.36□□□□□ -1.71
SLC8A1-207ENST00000406785 GCC2Q8IWJ2 1684 aa4.35□□□□□ -1.71
SLC8A1-207ENST00000406785 CASC1Q6TDU7 716 aa4.35□□□□□ -1.71
SLC8A1-207ENST00000406785 CACNA1FO60840 1977 aa4.35□□□□□ -1.71
SLC8A1-207ENST00000406785 NEFHP12036 1026 aa4.35□□□□□ -1.71
SLC8A1-207ENST00000406785 MROH2BQ7Z745 1585 aa4.35□□□□□ -1.71
SLC8A1-207ENST00000406785 SETD5Q9C0A6 1442 aa4.35□□□□□ -1.71
SLC8A1-207ENST00000406785 SETQ01105 290 aaPredicted RBP4.35□□□□□ -1.71
SLC8A1-207ENST00000406785 EIF2AK4Q9P2K8 1649 aaKnown RBP4.35□□□□□ -1.71
SLC8A1-207ENST00000406785 EIF4G2P78344 907 aaKnown RBP eCLIP4.35□□□□□ -1.71
SLC8A1-207ENST00000406785 TIAM1Q13009 1591 aa4.35□□□□□ -1.71
SLC8A1-207ENST00000406785 PTMAP06454 111 aaKnown RBP4.35□□□□□ -1.71
SLC8A1-207ENST00000406785 SLC4A1APQ9BWU0 796 aaKnown RBP4.35□□□□□ -1.71
SLC8A1-207ENST00000406785 ERCC6Q03468 1493 aa4.35□□□□□ -1.71
SLC8A1-207ENST00000406785 CARMIL2Q6F5E8 1435 aa4.35□□□□□ -1.71
SLC8A1-207ENST00000406785 CHAF1AQ13111 956 aaPredicted RBP4.34□□□□□ -1.71
SLC8A1-207ENST00000406785 TRIM52Q96A61 297 aa4.34□□□□□ -1.71
SLC8A1-207ENST00000406785 KANK1Q14678 1352 aa4.34□□□□□ -1.72
SLC8A1-207ENST00000406785 RAPGEF2Q9Y4G8 1499 aa4.33□□□□□ -1.72
SLC8A1-207ENST00000406785 PDS5BQ9NTI5 1447 aa4.33□□□□□ -1.72
SLC8A1-207ENST00000406785 STAC3Q96MF2 364 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms