RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 AQRO60306 1485 aaKnown RBP eCLIP24.15■■□□□ 1.46
LSP1-204ENST00000406638 TARBP1Q13395 1621 aaKnown RBP24.14■■□□□ 1.46
LSP1-204ENST00000406638 GAPVD1Q14C86 1478 aa24.14■■□□□ 1.45
LSP1-204ENST00000406638 ZNF608Q9ULD9 1512 aaPredicted RBP24.1■■□□□ 1.45
LSP1-204ENST00000406638 ABCA5Q8WWZ7 1642 aa24.1■■□□□ 1.45
LSP1-204ENST00000406638 ARAP1Q96P48 1450 aa24.09■■□□□ 1.45
LSP1-204ENST00000406638 VPS8Q8N3P4 1428 aa24.07■■□□□ 1.44
LSP1-204ENST00000406638 P3H3Q8IVL6 736 aa24.07■■□□□ 1.44
LSP1-204ENST00000406638 WDR62O43379 1518 aa24.06■■□□□ 1.44
LSP1-204ENST00000406638 ARHGAP35Q9NRY4 1499 aa24.04■■□□□ 1.44
LSP1-204ENST00000406638 THOC2Q8NI27 1593 aaKnown RBP24■■□□□ 1.43
LSP1-204ENST00000406638 CUL7Q14999 1698 aa23.95■■□□□ 1.42
LSP1-204ENST00000406638 IFT140Q96RY7 1462 aa23.94■■□□□ 1.42
LSP1-204ENST00000406638 KANK4Q5T7N3 995 aaPredicted RBP23.89■■□□□ 1.42
LSP1-204ENST00000406638 APLP2Q06481 763 aa23.89■■□□□ 1.41
LSP1-204ENST00000406638 PBRM1Q86U86 1689 aa23.88■■□□□ 1.41
LSP1-204ENST00000406638 FHOD3Q2V2M9 1422 aa23.86■■□□□ 1.41
LSP1-204ENST00000406638 GRIN2BQ13224 1484 aa23.85■■□□□ 1.41
LSP1-204ENST00000406638 EIF4G3O43432 1585 aaKnown RBP23.82■■□□□ 1.4
LSP1-204ENST00000406638 FHAD1B1AJZ9 1412 aa23.81■■□□□ 1.4
LSP1-204ENST00000406638 ATP1B4Q9UN42 357 aaPredicted RBP23.8■■□□□ 1.4
LSP1-204ENST00000406638 SNAPC4Q5SXM2 1469 aa23.8■■□□□ 1.4
LSP1-204ENST00000406638 ADAMTS12P58397 1594 aa23.79■■□□□ 1.4
LSP1-204ENST00000406638 SUPT16HQ9Y5B9 1047 aaKnown RBP23.79■■□□□ 1.4
LSP1-204ENST00000406638 CTTNBP2Q8WZ74 1663 aa23.77■■□□□ 1.4
LSP1-204ENST00000406638 FBLN2P98095 1184 aa23.76■■□□□ 1.39
LSP1-204ENST00000406638 ANP32EQ9BTT0 268 aa23.74■■□□□ 1.39
LSP1-204ENST00000406638 BCL11AQ9H165 835 aa23.74■■□□□ 1.39
LSP1-204ENST00000406638 HNRNPUL2Q1KMD3 747 aaKnown RBP23.73■■□□□ 1.39
LSP1-204ENST00000406638 TSHZ2Q9NRE2 1034 aa23.7■■□□□ 1.38
LSP1-204ENST00000406638 PCF11O94913 1555 aaKnown RBP23.65■■□□□ 1.38
LSP1-204ENST00000406638 CHMP7Q8WUX9 453 aaPredicted RBP23.65■■□□□ 1.38
LSP1-204ENST00000406638 GRIN2AQ12879 1464 aa23.61■■□□□ 1.37
LSP1-204ENST00000406638 EFCAB5A4FU69 1503 aa23.61■■□□□ 1.37
LSP1-204ENST00000406638 SAMD9Q5K651 1589 aa23.58■■□□□ 1.37
LSP1-204ENST00000406638 ARID3CA6NKF2 412 aa23.58■■□□□ 1.36
LSP1-204ENST00000406638 IQGAP2Q13576 1575 aa23.57■■□□□ 1.36
LSP1-204ENST00000406638 CLSPNQ9HAW4 1339 aa23.57■■□□□ 1.36
LSP1-204ENST00000406638 MAGI1Q96QZ7 1491 aaPredicted RBP23.55■■□□□ 1.36
LSP1-204ENST00000406638 TIAM1Q13009 1591 aa23.54■■□□□ 1.36
LSP1-204ENST00000406638 SYNJ2O15056 1496 aa23.54■■□□□ 1.36
LSP1-204ENST00000406638 CASKIN1Q8WXD9 1431 aa23.51■■□□□ 1.35
LSP1-204ENST00000406638 CEP170Q5SW79 1584 aa23.51■■□□□ 1.35
LSP1-204ENST00000406638 FMN1Q68DA7 1419 aa23.49■■□□□ 1.35
LSP1-204ENST00000406638 KIAA0586Q9BVV6 1533 aa23.49■■□□□ 1.35
LSP1-204ENST00000406638 LRRC9Q6ZRR7 1453 aa23.48■■□□□ 1.35
LSP1-204ENST00000406638 FYCO1Q9BQS8 1478 aa23.47■■□□□ 1.35
LSP1-204ENST00000406638 ITGAEP38570 1179 aa23.46■■□□□ 1.35
LSP1-204ENST00000406638 PHLDB1Q86UU1 1377 aa23.44■■□□□ 1.34
LSP1-204ENST00000406638 DISP1Q96F81 1524 aa23.43■■□□□ 1.34
LSP1-204ENST00000406638 UGGT2Q9NYU1 1516 aa23.42■■□□□ 1.34
LSP1-204ENST00000406638 LRRIQ1Q96JM4 1722 aa23.41■■□□□ 1.34
LSP1-204ENST00000406638 MAP3K1Q13233 1512 aa23.39■■□□□ 1.34
LSP1-204ENST00000406638 JPH4Q96JJ6 628 aa23.39■■□□□ 1.33
LSP1-204ENST00000406638 NUP160Q12769 1436 aa23.39■■□□□ 1.33
LSP1-204ENST00000406638 CFAP43Q8NDM7 1665 aa23.39■■□□□ 1.33
LSP1-204ENST00000406638 BCANQ96GW7 911 aa23.38■■□□□ 1.33
LSP1-204ENST00000406638 RRBP1Q9P2E9 1410 aaKnown RBP23.35■■□□□ 1.33
LSP1-204ENST00000406638 KIAA0556O60303 1618 aa23.35■■□□□ 1.33
LSP1-204ENST00000406638 CCNB3Q8WWL7 1395 aa23.35■■□□□ 1.33
LSP1-204ENST00000406638 CDK13Q14004 1512 aaKnown RBP23.32■■□□□ 1.32
LSP1-204ENST00000406638 MTUS2Q5JR59 1369 aa23.32■■□□□ 1.32
LSP1-204ENST00000406638 FAM50AQ14320 339 aaKnown RBP23.31■■□□□ 1.32
LSP1-204ENST00000406638 MAGI3Q5TCQ9 1506 aa23.3■■□□□ 1.32
LSP1-204ENST00000406638 CHD1O14646 1710 aa23.27■■□□□ 1.32
LSP1-204ENST00000406638 KCNH8Q96L42 1107 aa23.26■■□□□ 1.31
LSP1-204ENST00000406638 PLB1Q6P1J6 1458 aa23.25■■□□□ 1.31
LSP1-204ENST00000406638 EPRSP07814 1512 aaKnown RBP23.24■■□□□ 1.31
LSP1-204ENST00000406638 NUP153P49790 1475 aaKnown RBP23.2■■□□□ 1.3
LSP1-204ENST00000406638 FKBP8Q14318 412 aa23.2■■□□□ 1.3
LSP1-204ENST00000406638 HECW1Q76N89 1606 aa23.2■■□□□ 1.3
LSP1-204ENST00000406638 PRG4Q92954 1404 aaPredicted RBP23.19■■□□□ 1.3
LSP1-204ENST00000406638 NCOA2Q15596 1464 aa23.18■■□□□ 1.3
LSP1-204ENST00000406638 CARMIL2Q6F5E8 1435 aa23.16■■□□□ 1.3
LSP1-204ENST00000406638 RBM19Q9Y4C8 960 aaKnown RBP23.15■■□□□ 1.3
LSP1-204ENST00000406638 DHX57Q6P158 1386 aaKnown RBP23.14■■□□□ 1.3
LSP1-204ENST00000406638 CCDC18Q5T9S5 1454 aa23.13■■□□□ 1.29
LSP1-204ENST00000406638 RAPGEF6Q8TEU7 1601 aa23.13■■□□□ 1.29
LSP1-204ENST00000406638 ERCC6L2Q5T890 1561 aa23.12■■□□□ 1.29
LSP1-204ENST00000406638 FGD6Q6ZV73 1430 aa23.12■■□□□ 1.29
LSP1-204ENST00000406638 EHBP1L1Q8N3D4 1523 aa23.1■■□□□ 1.29
LSP1-204ENST00000406638 MYOM3Q5VTT5 1437 aa23.06■■□□□ 1.28
LSP1-204ENST00000406638 SUPT6HQ7KZ85 1726 aaKnown RBP23.05■■□□□ 1.28
LSP1-204ENST00000406638 PTPRKQ15262 1439 aa23.04■■□□□ 1.28
LSP1-204ENST00000406638 PTPRGP23470 1445 aa23.04■■□□□ 1.28
LSP1-204ENST00000406638 RAB3GAP2Q9H2M9 1393 aa23.02■■□□□ 1.28
LSP1-204ENST00000406638 ARHGEF11O15085 1522 aa23.02■■□□□ 1.28
LSP1-204ENST00000406638 ZNF644Q9H582 1327 aaPredicted RBP22.99■■□□□ 1.27
LSP1-204ENST00000406638 ABCA8O94911 1581 aa22.98■■□□□ 1.27
LSP1-204ENST00000406638 CHIC2Q9UKJ5 165 aa22.97■■□□□ 1.27
LSP1-204ENST00000406638 ATP10BO94823 1461 aa22.96■■□□□ 1.27
LSP1-204ENST00000406638 MSH5O43196 834 aa22.95■■□□□ 1.27
LSP1-204ENST00000406638 SHROOM2Q13796 1616 aa22.95■■□□□ 1.26
LSP1-204ENST00000406638 NEFLP07196 543 aa22.94■■□□□ 1.26
LSP1-204ENST00000406638 SETD5Q9C0A6 1442 aa22.93■■□□□ 1.26
LSP1-204ENST00000406638 CLASP1Q7Z460 1538 aa22.93■■□□□ 1.26
LSP1-204ENST00000406638 CDK11AQ9UQ88 783 aaPredicted RBP22.93■■□□□ 1.26
LSP1-204ENST00000406638 PTPN23Q9H3S7 1636 aa22.93■■□□□ 1.26
LSP1-204ENST00000406638 KIF14Q15058 1648 aa22.92■■□□□ 1.26
LSP1-204ENST00000406638 TROQ12816 1431 aaPredicted RBP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms