RNA–Protein interactions for RNA: ENST00000406310.5

ESRRA-203, Transcript of estrogen related receptor alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ESRRA, Length 2,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRA-203ENST00000406310 TIAM1Q13009 1591 aa33.65■■■□□ 2.98
ESRRA-203ENST00000406310 PPP1R15AO75807 674 aaPredicted RBP33.65■■■□□ 2.98
ESRRA-203ENST00000406310 DDX10Q13206 875 aaKnown RBP33.64■■■□□ 2.98
ESRRA-203ENST00000406310 ITGAEP38570 1179 aa33.57■■■□□ 2.96
ESRRA-203ENST00000406310 ANP32CO43423 234 aa33.56■■■□□ 2.96
ESRRA-203ENST00000406310 NCAPD3P42695 1498 aa33.55■■■□□ 2.96
ESRRA-203ENST00000406310 CUX1P39880 1505 aa33.55■■■□□ 2.96
ESRRA-203ENST00000406310 CC2D2AQ9P2K1 1620 aa33.51■■■□□ 2.95
ESRRA-203ENST00000406310 LRRC9Q6ZRR7 1453 aa33.48■■■□□ 2.95
ESRRA-203ENST00000406310 FANCIQ9NVI1 1328 aa33.44■■■□□ 2.94
ESRRA-203ENST00000406310 CFAP43Q8NDM7 1665 aa33.41■■■□□ 2.94
ESRRA-203ENST00000406310 HMGXB3Q12766 1538 aa33.41■■■□□ 2.94
ESRRA-203ENST00000406310 SIN3AQ96ST3 1273 aa33.37■■■□□ 2.93
ESRRA-203ENST00000406310 FHAD1B1AJZ9 1412 aa33.36■■■□□ 2.93
ESRRA-203ENST00000406310 TRIM52Q96A61 297 aa33.36■■■□□ 2.93
ESRRA-203ENST00000406310 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.34■■■□□ 2.938e-7■■■■□ 22.9
ESRRA-203ENST00000406310 PHLDB1Q86UU1 1377 aa33.33■■■□□ 2.93
ESRRA-203ENST00000406310 MYT1LQ9UL68 1186 aa33.32■■■□□ 2.92
ESRRA-203ENST00000406310 ERICH6BQ5W0A0 696 aa33.29■■■□□ 2.92
ESRRA-203ENST00000406310 CDK11AQ9UQ88 783 aaPredicted RBP33.28■■■□□ 2.92
ESRRA-203ENST00000406310 MSH5O43196 834 aa33.24■■■□□ 2.91
ESRRA-203ENST00000406310 FAM50AQ14320 339 aaKnown RBP33.22■■■□□ 2.91
ESRRA-203ENST00000406310 ERICH6Q7L0X2 663 aa33.21■■■□□ 2.91
ESRRA-203ENST00000406310 CFTRP13569 1480 aa33.21■■■□□ 2.91
ESRRA-203ENST00000406310 PRDM2Q13029 1718 aa33.21■■■□□ 2.91
ESRRA-203ENST00000406310 TONSLQ96HA7 1378 aa33.18■■■□□ 2.9
ESRRA-203ENST00000406310 IGF1RP08069 1367 aa33.17■■■□□ 2.9
ESRRA-203ENST00000406310 PCF11O94913 1555 aaKnown RBP33.14■■■□□ 2.89
ESRRA-203ENST00000406310 DNAJC5BQ9UF47 199 aa33.09■■■□□ 2.89
ESRRA-203ENST00000406310 CARMIL1Q5VZK9 1371 aa33.08■■■□□ 2.89
ESRRA-203ENST00000406310 FYCO1Q9BQS8 1478 aa33.08■■■□□ 2.89
ESRRA-203ENST00000406310 HIRIP3Q9BW71 556 aaPredicted RBP33.06■■■□□ 2.88
ESRRA-203ENST00000406310 AQRO60306 1485 aaKnown RBP eCLIP33.03■■■□□ 2.884e-7■■■■■ 27.8
ESRRA-203ENST00000406310 HNRNPUQ00839 825 aaKnown RBP eCLIP33.03■■■□□ 2.88
ESRRA-203ENST00000406310 UACAQ9BZF9 1416 aa33.03■■■□□ 2.88
ESRRA-203ENST00000406310 EFCAB5A4FU69 1503 aa33■■■□□ 2.87
ESRRA-203ENST00000406310 CCDC18Q5T9S5 1454 aa33■■■□□ 2.87
ESRRA-203ENST00000406310 PPP4R2Q9NY27 417 aa32.99■■■□□ 2.87
ESRRA-203ENST00000406310 FGD5Q6ZNL6 1462 aa32.96■■■□□ 2.87
ESRRA-203ENST00000406310 HFM1A2PYH4 1435 aa32.96■■■□□ 2.87
ESRRA-203ENST00000406310 CASKIN1Q8WXD9 1431 aa32.96■■■□□ 2.87
ESRRA-203ENST00000406310 FGD6Q6ZV73 1430 aa32.92■■■□□ 2.86
ESRRA-203ENST00000406310 PTPN23Q9H3S7 1636 aa32.91■■■□□ 2.86
ESRRA-203ENST00000406310 KDM5BQ9UGL1 1544 aa32.83■■■□□ 2.85
ESRRA-203ENST00000406310 NCOA2Q15596 1464 aa32.82■■■□□ 2.84
ESRRA-203ENST00000406310 CADPSQ9ULU8 1353 aa32.8■■■□□ 2.84
ESRRA-203ENST00000406310 IRX6P78412 446 aaPredicted RBP32.77■■■□□ 2.84
ESRRA-203ENST00000406310 FHOD3Q2V2M9 1422 aa32.76■■■□□ 2.84
ESRRA-203ENST00000406310 FMN1Q68DA7 1419 aa32.76■■■□□ 2.84
ESRRA-203ENST00000406310 CNTLNQ9NXG0 1405 aa32.75■■■□□ 2.83
ESRRA-203ENST00000406310 NAIPQ13075 1403 aa32.73■■■□□ 2.83
ESRRA-203ENST00000406310 ATP1B4Q9UN42 357 aaPredicted RBP32.73■■■□□ 2.83
ESRRA-203ENST00000406310 CTTNBP2Q8WZ74 1663 aa32.72■■■□□ 2.83
ESRRA-203ENST00000406310 WASHC2AQ641Q2 1341 aa32.71■■■□□ 2.83
ESRRA-203ENST00000406310 NESP48681 1621 aa32.69■■■□□ 2.82
ESRRA-203ENST00000406310 ZBED9Q6R2W3 1325 aa32.69■■■□□ 2.82
ESRRA-203ENST00000406310 DEKP35659 375 aaKnown RBP32.67■■■□□ 2.82
ESRRA-203ENST00000406310 CUL7Q14999 1698 aa32.66■■■□□ 2.82
ESRRA-203ENST00000406310 PTPRKQ15262 1439 aa32.65■■■□□ 2.82
ESRRA-203ENST00000406310 HECW1Q76N89 1606 aa32.65■■■□□ 2.82
ESRRA-203ENST00000406310 HSPA5P11021 654 aaKnown RBP32.65■■■□□ 2.82
ESRRA-203ENST00000406310 P3H3Q8IVL6 736 aa32.65■■■□□ 2.82
ESRRA-203ENST00000406310 MTUS2Q5JR59 1369 aa32.64■■■□□ 2.82
ESRRA-203ENST00000406310 EIF4G2P78344 907 aaKnown RBP eCLIP32.64■■■□□ 2.822e-8■■■■□ 24.1
ESRRA-203ENST00000406310 MYOM3Q5VTT5 1437 aa32.62■■■□□ 2.81
ESRRA-203ENST00000406310 SNAPC4Q5SXM2 1469 aa32.62■■■□□ 2.81
ESRRA-203ENST00000406310 NOP58Q9Y2X3 529 aaKnown RBP32.61■■■□□ 2.81
ESRRA-203ENST00000406310 THOC2Q8NI27 1593 aaKnown RBP32.61■■■□□ 2.81
ESRRA-203ENST00000406310 SUPT6HQ7KZ85 1726 aaKnown RBP32.6■■■□□ 2.81
ESRRA-203ENST00000406310 GCC2Q8IWJ2 1684 aa32.59■■■□□ 2.81
ESRRA-203ENST00000406310 PRKRIP1Q9H875 184 aaPredicted RBP32.54■■■□□ 2.8
ESRRA-203ENST00000406310 NCOA1Q15788 1441 aa32.54■■■□□ 2.8
ESRRA-203ENST00000406310 EHBP1L1Q8N3D4 1523 aa32.54■■■□□ 2.8
ESRRA-203ENST00000406310 AKNAQ7Z591 1439 aa32.53■■■□□ 2.8
ESRRA-203ENST00000406310 ABCA10Q8WWZ4 1543 aa32.52■■■□□ 2.8
ESRRA-203ENST00000406310 POLR1AO95602 1720 aaPredicted RBP32.52■■■□□ 2.8
ESRRA-203ENST00000406310 B4GALNT3Q6L9W6 998 aa32.52■■■□□ 2.8
ESRRA-203ENST00000406310 CCDC7Q96M83 1385 aa32.49■■■□□ 2.79
ESRRA-203ENST00000406310 ABCA5Q8WWZ7 1642 aa32.48■■■□□ 2.79
ESRRA-203ENST00000406310 MRS2Q9HD23 443 aa32.47■■■□□ 2.79
ESRRA-203ENST00000406310 FANCD2Q9BXW9 1451 aa32.46■■■□□ 2.79
ESRRA-203ENST00000406310 SAMD9Q5K651 1589 aa32.45■■■□□ 2.79
ESRRA-203ENST00000406310 LRRIQ1Q96JM4 1722 aa32.44■■■□□ 2.78
ESRRA-203ENST00000406310 FAM9BQ8IZU0 186 aa32.43■■■□□ 2.78
ESRRA-203ENST00000406310 SMG6Q86US8 1419 aaKnown RBP32.42■■■□□ 2.78
ESRRA-203ENST00000406310 UGGT2Q9NYU1 1516 aa32.42■■■□□ 2.78
ESRRA-203ENST00000406310 TCOF1Q13428 1488 aaKnown RBP32.42■■■□□ 2.78
ESRRA-203ENST00000406310 KIF21AQ7Z4S6 1674 aa32.42■■■□□ 2.78
ESRRA-203ENST00000406310 CCDC184Q52MB2 194 aa32.42■■■□□ 2.78
ESRRA-203ENST00000406310 DNMBPQ6XZF7 1577 aa32.42■■■□□ 2.78
ESRRA-203ENST00000406310 GRIN2BQ13224 1484 aa32.41■■■□□ 2.78
ESRRA-203ENST00000406310 ARHGEF11O15085 1522 aa32.41■■■□□ 2.78
ESRRA-203ENST00000406310 ANP32AP39687 249 aaKnown RBP32.38■■■□□ 2.77
ESRRA-203ENST00000406310 DENND4BO75064 1496 aaPredicted RBP32.37■■■□□ 2.77
ESRRA-203ENST00000406310 LAMC3Q9Y6N6 1575 aa32.35■■■□□ 2.77
ESRRA-203ENST00000406310 IPO9Q96P70 1041 aaKnown RBP32.33■■■□□ 2.77
ESRRA-203ENST00000406310 RNF123Q5XPI4 1314 aa32.32■■■□□ 2.76
ESRRA-203ENST00000406310 RTL5Q5HYW3 569 aaPredicted RBP32.3■■■□□ 2.76
ESRRA-203ENST00000406310 PAK3O75914 559 aaPredicted RBP32.26■■■□□ 2.76
ESRRA-203ENST00000406310 NBR1Q14596 966 aa32.26■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms