RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 MYT1LQ9UL68 1186 aa22.9■■□□□ 1.26
COL4A3BP-204ENST00000405807 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.88■■□□□ 1.25
COL4A3BP-204ENST00000405807 RBM19Q9Y4C8 960 aaKnown RBP22.87■■□□□ 1.25
COL4A3BP-204ENST00000405807 KIF27Q86VH2 1401 aa22.87■■□□□ 1.25
COL4A3BP-204ENST00000405807 MSH5O43196 834 aa22.84■■□□□ 1.25
COL4A3BP-204ENST00000405807 ITGAEP38570 1179 aa22.83■■□□□ 1.25
COL4A3BP-204ENST00000405807 RAB3GAP2Q9H2M9 1393 aa22.82■■□□□ 1.24
COL4A3BP-204ENST00000405807 ARHGAP35Q9NRY4 1499 aa22.81■■□□□ 1.24
COL4A3BP-204ENST00000405807 KCNH8Q96L42 1107 aa22.8■■□□□ 1.24
COL4A3BP-204ENST00000405807 CUX1P39880 1505 aa22.76■■□□□ 1.23
COL4A3BP-204ENST00000405807 MAPKBP1O60336 1514 aa22.76■■□□□ 1.23
COL4A3BP-204ENST00000405807 SETD5Q9C0A6 1442 aa22.73■■□□□ 1.23
COL4A3BP-204ENST00000405807 MAP3K1Q13233 1512 aa22.71■■□□□ 1.23
COL4A3BP-204ENST00000405807 DDX10Q13206 875 aaKnown RBP22.7■■□□□ 1.22
COL4A3BP-204ENST00000405807 FKBP8Q14318 412 aa22.7■■□□□ 1.22
COL4A3BP-204ENST00000405807 TIMELESSQ9UNS1 1208 aa22.68■■□□□ 1.22
COL4A3BP-204ENST00000405807 BCANQ96GW7 911 aa22.67■■□□□ 1.22
COL4A3BP-204ENST00000405807 TIAM1Q13009 1591 aa22.65■■□□□ 1.22
COL4A3BP-204ENST00000405807 PPP1R15AO75807 674 aaPredicted RBP22.63■■□□□ 1.21
COL4A3BP-204ENST00000405807 NEFLP07196 543 aa22.63■■□□□ 1.21
COL4A3BP-204ENST00000405807 WDR97A6NE52 1622 aa22.62■■□□□ 1.21
COL4A3BP-204ENST00000405807 NCAPD3P42695 1498 aa22.62■■□□□ 1.21
COL4A3BP-204ENST00000405807 HMGXB3Q12766 1538 aa22.61■■□□□ 1.21
COL4A3BP-204ENST00000405807 CCER2I3L3R5 266 aa22.61■■□□□ 1.21
COL4A3BP-204ENST00000405807 SIN3AQ96ST3 1273 aa22.61■■□□□ 1.21
COL4A3BP-204ENST00000405807 LRRC9Q6ZRR7 1453 aa22.6■■□□□ 1.21
COL4A3BP-204ENST00000405807 CFTRP13569 1480 aa22.58■■□□□ 1.2
COL4A3BP-204ENST00000405807 IGF1RP08069 1367 aa22.57■■□□□ 1.2
COL4A3BP-204ENST00000405807 FAM50AQ14320 339 aaKnown RBP22.56■■□□□ 1.2
COL4A3BP-204ENST00000405807 PHLDB1Q86UU1 1377 aa22.56■■□□□ 1.2
COL4A3BP-204ENST00000405807 ANP32CO43423 234 aa22.55■■□□□ 1.2
COL4A3BP-204ENST00000405807 RTN4Q9NQC3 1192 aaKnown RBP22.54■■□□□ 1.2
COL4A3BP-204ENST00000405807 IL27Q8NEV9 243 aa22.52■■□□□ 1.2
COL4A3BP-204ENST00000405807 FHAD1B1AJZ9 1412 aa22.51■■□□□ 1.19
COL4A3BP-204ENST00000405807 CARMIL1Q5VZK9 1371 aa22.49■■□□□ 1.19
COL4A3BP-204ENST00000405807 TRIM52Q96A61 297 aa22.46■■□□□ 1.19
COL4A3BP-204ENST00000405807 FANCIQ9NVI1 1328 aa22.44■■□□□ 1.18
COL4A3BP-204ENST00000405807 HIRIP3Q9BW71 556 aaPredicted RBP22.43■■□□□ 1.18
COL4A3BP-204ENST00000405807 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.42■■□□□ 1.18
COL4A3BP-204ENST00000405807 CFAP43Q8NDM7 1665 aa22.4■■□□□ 1.18
COL4A3BP-204ENST00000405807 ATP1B4Q9UN42 357 aaPredicted RBP22.36■■□□□ 1.17
COL4A3BP-204ENST00000405807 TONSLQ96HA7 1378 aa22.36■■□□□ 1.17
COL4A3BP-204ENST00000405807 PCF11O94913 1555 aaKnown RBP22.34■■□□□ 1.17
COL4A3BP-204ENST00000405807 P3H3Q8IVL6 736 aa22.32■■□□□ 1.16
COL4A3BP-204ENST00000405807 PRDM2Q13029 1718 aa22.32■■□□□ 1.16
COL4A3BP-204ENST00000405807 FYCO1Q9BQS8 1478 aa22.3■■□□□ 1.16
COL4A3BP-204ENST00000405807 FGD5Q6ZNL6 1462 aa22.29■■□□□ 1.16
COL4A3BP-204ENST00000405807 CASKIN1Q8WXD9 1431 aa22.27■■□□□ 1.16
COL4A3BP-204ENST00000405807 ZMYND15Q9H091 742 aa22.26■■□□□ 1.15
COL4A3BP-204ENST00000405807 AQRO60306 1485 aaKnown RBP eCLIP22.26■■□□□ 1.152e-10■■■■□ 21.8
COL4A3BP-204ENST00000405807 CADPSQ9ULU8 1353 aa22.25■■□□□ 1.15
COL4A3BP-204ENST00000405807 FHOD3Q2V2M9 1422 aa22.24■■□□□ 1.15
COL4A3BP-204ENST00000405807 UACAQ9BZF9 1416 aa22.23■■□□□ 1.15
COL4A3BP-204ENST00000405807 EFCAB5A4FU69 1503 aa22.23■■□□□ 1.15
COL4A3BP-204ENST00000405807 FGD6Q6ZV73 1430 aa22.23■■□□□ 1.15
COL4A3BP-204ENST00000405807 CCDC18Q5T9S5 1454 aa22.23■■□□□ 1.15
COL4A3BP-204ENST00000405807 CDK11AQ9UQ88 783 aaPredicted RBP22.22■■□□□ 1.15
COL4A3BP-204ENST00000405807 NBR1Q14596 966 aa22.21■■□□□ 1.15
COL4A3BP-204ENST00000405807 HFM1A2PYH4 1435 aa22.21■■□□□ 1.15
COL4A3BP-204ENST00000405807 HNRNPUQ00839 825 aaKnown RBP eCLIP22.21■■□□□ 1.15
COL4A3BP-204ENST00000405807 GLIPR1L2Q4G1C9 344 aa22.18■■□□□ 1.14
COL4A3BP-204ENST00000405807 PDE4CQ08493 712 aa22.16■■□□□ 1.14
COL4A3BP-204ENST00000405807 FMN1Q68DA7 1419 aa22.15■■□□□ 1.14
COL4A3BP-204ENST00000405807 MTUS2Q5JR59 1369 aa22.13■■□□□ 1.13
COL4A3BP-204ENST00000405807 PTPN23Q9H3S7 1636 aa22.13■■□□□ 1.13
COL4A3BP-204ENST00000405807 VSIG10Q8N0Z9 540 aa22.12■■□□□ 1.13
COL4A3BP-204ENST00000405807 A0A0U1RQG5 324 aaPredicted RBP22.12■■□□□ 1.13
COL4A3BP-204ENST00000405807 PTPRKQ15262 1439 aa22.12■■□□□ 1.13
COL4A3BP-204ENST00000405807 NAIPQ13075 1403 aa22.1■■□□□ 1.13
COL4A3BP-204ENST00000405807 IRX6P78412 446 aaPredicted RBP22.08■■□□□ 1.13
COL4A3BP-204ENST00000405807 PPP4R2Q9NY27 417 aa22.06■■□□□ 1.12
COL4A3BP-204ENST00000405807 KDM5BQ9UGL1 1544 aa22.06■■□□□ 1.12
COL4A3BP-204ENST00000405807 ABCA10Q8WWZ4 1543 aa22.06■■□□□ 1.12
COL4A3BP-204ENST00000405807 WASHC2AQ641Q2 1341 aa22.05■■□□□ 1.12
COL4A3BP-204ENST00000405807 PDIA4P13667 645 aaKnown RBP22.05■■□□□ 1.12
COL4A3BP-204ENST00000405807 FGD1P98174 961 aa22.05■■□□□ 1.12
COL4A3BP-204ENST00000405807 HSPA5P11021 654 aaKnown RBP22.05■■□□□ 1.12
COL4A3BP-204ENST00000405807 SNAPC4Q5SXM2 1469 aa22.04■■□□□ 1.12
COL4A3BP-204ENST00000405807 MYOM3Q5VTT5 1437 aa22.04■■□□□ 1.12
COL4A3BP-204ENST00000405807 CC2D2AQ9P2K1 1620 aa22.03■■□□□ 1.12
COL4A3BP-204ENST00000405807 CUL7Q14999 1698 aa22.02■■□□□ 1.12
COL4A3BP-204ENST00000405807 EIF4G2P78344 907 aaKnown RBP eCLIP22.01■■□□□ 1.11
COL4A3BP-204ENST00000405807 FANCD2Q9BXW9 1451 aa22.01■■□□□ 1.11
COL4A3BP-204ENST00000405807 CTTNBP2Q8WZ74 1663 aa22■■□□□ 1.11
COL4A3BP-204ENST00000405807 NCOA2Q15596 1464 aa22■■□□□ 1.11
COL4A3BP-204ENST00000405807 RAD54L2Q9Y4B4 1467 aa22■■□□□ 1.11
COL4A3BP-204ENST00000405807 RTL5Q5HYW3 569 aaPredicted RBP21.98■■□□□ 1.11
COL4A3BP-204ENST00000405807 DNMBPQ6XZF7 1577 aa21.97■■□□□ 1.11
COL4A3BP-204ENST00000405807 CNTLNQ9NXG0 1405 aa21.96■■□□□ 1.11
COL4A3BP-204ENST00000405807 AEBP2Q6ZN18 517 aaPredicted RBP21.96■■□□□ 1.11
COL4A3BP-204ENST00000405807 POLA1P09884 1462 aaPredicted RBP21.94■■□□□ 1.1
COL4A3BP-204ENST00000405807 SUPT6HQ7KZ85 1726 aaKnown RBP21.93■■□□□ 1.1
COL4A3BP-204ENST00000405807 AAMPQ13685 434 aa21.93■■□□□ 1.1
COL4A3BP-204ENST00000405807 RBM10P98175 930 aaKnown RBP21.92■■□□□ 1.1
COL4A3BP-204ENST00000405807 NOP58Q9Y2X3 529 aaKnown RBP21.92■■□□□ 1.1
COL4A3BP-204ENST00000405807 EHBP1L1Q8N3D4 1523 aa21.91■■□□□ 1.1
COL4A3BP-204ENST00000405807 TOPBP1Q92547 1522 aa21.91■■□□□ 1.1
COL4A3BP-204ENST00000405807 PRKRIP1Q9H875 184 aaPredicted RBP21.91■■□□□ 1.1
COL4A3BP-204ENST00000405807 GRIN2BQ13224 1484 aa21.91■■□□□ 1.1
COL4A3BP-204ENST00000405807 RRP7BPQ9NSQ0 103 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms