RNA–Protein interactions for RNA: ENST00000403259.1

HIST1H2APS3-201, Transcript of histone cluster 1 H2A pseudogene 3, humanhuman

BASIC

Gene HIST1H2APS3, Length 134 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2APS3-201ENST00000403259 POLA1P09884 1462 aaPredicted RBP6.53□□□□□ -1.36
HIST1H2APS3-201ENST00000403259 RAD54L2Q9Y4B4 1467 aa6.53□□□□□ -1.36
HIST1H2APS3-201ENST00000403259 DNMBPQ6XZF7 1577 aa6.52□□□□□ -1.36
HIST1H2APS3-201ENST00000403259 HSPA2P54652 639 aa6.52□□□□□ -1.37
HIST1H2APS3-201ENST00000403259 KIF21BO75037 1637 aa6.5□□□□□ -1.37
HIST1H2APS3-201ENST00000403259 WDR97A6NE52 1622 aa6.5□□□□□ -1.37
HIST1H2APS3-201ENST00000403259 ABCC8Q09428 1581 aa6.49□□□□□ -1.37
HIST1H2APS3-201ENST00000403259 GLI2P10070 1586 aa6.48□□□□□ -1.37
HIST1H2APS3-201ENST00000403259 WIZO95785 1651 aa6.47□□□□□ -1.37
HIST1H2APS3-201ENST00000403259 NUP160Q12769 1436 aa6.47□□□□□ -1.37
HIST1H2APS3-201ENST00000403259 GRIN2BQ13224 1484 aa6.47□□□□□ -1.37
HIST1H2APS3-201ENST00000403259 LTBP4Q8N2S1 1624 aa6.47□□□□□ -1.37
HIST1H2APS3-201ENST00000403259 STRCQ7RTU9 1775 aa6.46□□□□□ -1.37
HIST1H2APS3-201ENST00000403259 MAP3K4Q9Y6R4 1608 aa6.43□□□□□ -1.38
HIST1H2APS3-201ENST00000403259 PBRM1Q86U86 1689 aa6.43□□□□□ -1.38
HIST1H2APS3-201ENST00000403259 IQSEC2Q5JU85 1478 aa6.43□□□□□ -1.38
HIST1H2APS3-201ENST00000403259 IFFO2Q5TF58 517 aa6.43□□□□□ -1.38
HIST1H2APS3-201ENST00000403259 MADDQ8WXG6 1647 aa6.43□□□□□ -1.38
HIST1H2APS3-201ENST00000403259 SOGA1O94964 1423 aa6.42□□□□□ -1.38
HIST1H2APS3-201ENST00000403259 PRG4Q92954 1404 aaPredicted RBP6.42□□□□□ -1.38
HIST1H2APS3-201ENST00000403259 GRIN2AQ12879 1464 aa6.41□□□□□ -1.38
HIST1H2APS3-201ENST00000403259 RGS17Q9UGC6 210 aaPredicted RBP6.41□□□□□ -1.38
HIST1H2APS3-201ENST00000403259 BCORL1Q5H9F3 1711 aa6.4□□□□□ -1.38
HIST1H2APS3-201ENST00000403259 NPM1P06748 294 aaKnown RBP eCLIP6.4□□□□□ -1.38
HIST1H2APS3-201ENST00000403259 RIMS1Q86UR5 1692 aaKnown RBP6.36□□□□□ -1.39
HIST1H2APS3-201ENST00000403259 ASXL2Q76L83 1435 aa6.36□□□□□ -1.39
HIST1H2APS3-201ENST00000403259 TEX14Q8IWB6 1497 aa6.35□□□□□ -1.39
HIST1H2APS3-201ENST00000403259 YEATS2Q9ULM3 1422 aa6.35□□□□□ -1.39
HIST1H2APS3-201ENST00000403259 HSPA1LP34931 641 aa6.35□□□□□ -1.39
HIST1H2APS3-201ENST00000403259 SETD1AO15047 1707 aaKnown RBP6.35□□□□□ -1.39
HIST1H2APS3-201ENST00000403259 FGD5Q6ZNL6 1462 aa6.34□□□□□ -1.39
HIST1H2APS3-201ENST00000403259 PTPRTO14522 1441 aa6.34□□□□□ -1.39
HIST1H2APS3-201ENST00000403259 EPRSP07814 1512 aaKnown RBP6.34□□□□□ -1.39
HIST1H2APS3-201ENST00000403259 KIAA0586Q9BVV6 1533 aa6.34□□□□□ -1.39
HIST1H2APS3-201ENST00000403259 ABCA5Q8WWZ7 1642 aa6.33□□□□□ -1.4
HIST1H2APS3-201ENST00000403259 ADAMTS12P58397 1594 aa6.33□□□□□ -1.4
HIST1H2APS3-201ENST00000403259 PLB1Q6P1J6 1458 aa6.33□□□□□ -1.4
HIST1H2APS3-201ENST00000403259 JPH4Q96JJ6 628 aa6.32□□□□□ -1.4
HIST1H2APS3-201ENST00000403259 PHF23Q9BUL5 403 aaPredicted RBP6.32□□□□□ -1.4
HIST1H2APS3-201ENST00000403259 ABCC2Q92887 1545 aa6.3□□□□□ -1.4
HIST1H2APS3-201ENST00000403259 UBAP1LF5GYI3 381 aa6.3□□□□□ -1.4
HIST1H2APS3-201ENST00000403259 CUL7Q14999 1698 aa6.29□□□□□ -1.4
HIST1H2APS3-201ENST00000403259 TOP2AP11388 1531 aaKnown RBP6.29□□□□□ -1.4
HIST1H2APS3-201ENST00000403259 POTEAQ6S8J7 498 aa6.28□□□□□ -1.4
HIST1H2APS3-201ENST00000403259 DMRT2Q9Y5R5 561 aa6.28□□□□□ -1.4
HIST1H2APS3-201ENST00000403259 PREX1Q8TCU6 1659 aa6.28□□□□□ -1.4
HIST1H2APS3-201ENST00000403259 RUSC2Q8N2Y8 1516 aa6.27□□□□□ -1.41
HIST1H2APS3-201ENST00000403259 CFAP43Q8NDM7 1665 aa6.26□□□□□ -1.41
HIST1H2APS3-201ENST00000403259 MAGI3Q5TCQ9 1506 aa6.26□□□□□ -1.41
HIST1H2APS3-201ENST00000403259 SIGLEC1Q9BZZ2 1709 aa6.26□□□□□ -1.41
HIST1H2APS3-201ENST00000403259 ALKQ9UM73 1620 aa6.25□□□□□ -1.41
HIST1H2APS3-201ENST00000403259 UPF1Q92900 1129 aaKnown RBP eCLIP6.25□□□□□ -1.41
HIST1H2APS3-201ENST00000403259 CUX1P39880 1505 aa6.25□□□□□ -1.41
HIST1H2APS3-201ENST00000403259 ARAP3Q8WWN8 1544 aa6.25□□□□□ -1.41
HIST1H2APS3-201ENST00000403259 CCDC88BA6NC98 1476 aa6.23□□□□□ -1.41
HIST1H2APS3-201ENST00000403259 ABCA10Q8WWZ4 1543 aa6.23□□□□□ -1.41
HIST1H2APS3-201ENST00000403259 TTC37Q6PGP7 1564 aa6.23□□□□□ -1.41
HIST1H2APS3-201ENST00000403259 SETD1BQ9UPS6 1966 aaKnown RBP6.22□□□□□ -1.41
HIST1H2APS3-201ENST00000403259 FHAD1B1AJZ9 1412 aa6.22□□□□□ -1.41
HIST1H2APS3-201ENST00000403259 UHRF1BP1LA0JNW5 1464 aa6.21□□□□□ -1.42
HIST1H2APS3-201ENST00000403259 CEP350Q5VT06 3117 aa6.21□□□□□ -1.42
HIST1H2APS3-201ENST00000403259 FRMPD1Q5SYB0 1578 aa6.2□□□□□ -1.42
HIST1H2APS3-201ENST00000403259 PLPPR3Q6T4P5 718 aa6.2□□□□□ -1.42
HIST1H2APS3-201ENST00000403259 ZNF335Q9H4Z2 1342 aaPredicted RBP6.2□□□□□ -1.42
HIST1H2APS3-201ENST00000403259 KDM5BQ9UGL1 1544 aa6.2□□□□□ -1.42
HIST1H2APS3-201ENST00000403259 FER1L4A9Z1Z3 1794 aa6.18□□□□□ -1.42
HIST1H2APS3-201ENST00000403259 ZCCHC11Q5TAX3 1644 aaKnown RBP6.17□□□□□ -1.42
HIST1H2APS3-201ENST00000403259 NCOA1Q15788 1441 aa6.17□□□□□ -1.42
HIST1H2APS3-201ENST00000403259 CD109Q6YHK3 1445 aa6.17□□□□□ -1.42
HIST1H2APS3-201ENST00000403259 PIP4K2BP78356 416 aa6.17□□□□□ -1.42
HIST1H2APS3-201ENST00000403259 PTPRGP23470 1445 aa6.16□□□□□ -1.42
HIST1H2APS3-201ENST00000403259 SETBP1Q9Y6X0 1596 aa6.16□□□□□ -1.42
HIST1H2APS3-201ENST00000403259 ARHGEF40Q8TER5 1519 aa6.15□□□□□ -1.42
HIST1H2APS3-201ENST00000403259 ARID4BQ4LE39 1312 aaPredicted RBP6.15□□□□□ -1.43
HIST1H2APS3-201ENST00000403259 WDR7Q9Y4E6 1490 aa6.15□□□□□ -1.43
HIST1H2APS3-201ENST00000403259 RAPGEF3O95398 923 aa6.14□□□□□ -1.43
HIST1H2APS3-201ENST00000403259 CEBPAP49715 358 aaPredicted RBP6.13□□□□□ -1.43
HIST1H2APS3-201ENST00000403259 UHRF1BP1Q6BDS2 1440 aa6.12□□□□□ -1.43
HIST1H2APS3-201ENST00000403259 UACAQ9BZF9 1416 aa6.12□□□□□ -1.43
HIST1H2APS3-201ENST00000403259 SCAF1Q9H7N4 1312 aaKnown RBP6.12□□□□□ -1.43
HIST1H2APS3-201ENST00000403259 ARHGEF12Q9NZN5 1544 aa6.12□□□□□ -1.43
HIST1H2APS3-201ENST00000403259 ERICH3Q5RHP9 1530 aa6.11□□□□□ -1.43
HIST1H2APS3-201ENST00000403259 KIAA0556O60303 1618 aa6.1□□□□□ -1.43
HIST1H2APS3-201ENST00000403259 SLC34A2O95436 690 aa6.1□□□□□ -1.43
HIST1H2APS3-201ENST00000403259 TOM1O60784 492 aa6.09□□□□□ -1.43
HIST1H2APS3-201ENST00000403259 EP400Q96L91 3159 aa6.08□□□□□ -1.44
HIST1H2APS3-201ENST00000403259 TNIKQ9UKE5 1360 aa6.08□□□□□ -1.44
HIST1H2APS3-201ENST00000403259 FANCAO15360 1455 aa6.08□□□□□ -1.44
HIST1H2APS3-201ENST00000403259 RICTORQ6R327 1708 aa6.08□□□□□ -1.44
HIST1H2APS3-201ENST00000403259 RBM33Q96EV2 1170 aaKnown RBP6.07□□□□□ -1.44
HIST1H2APS3-201ENST00000403259 CAMSAP1Q5T5Y3 1602 aa6.07□□□□□ -1.44
HIST1H2APS3-201ENST00000403259 POGZQ7Z3K3 1410 aa6.06□□□□□ -1.44
HIST1H2APS3-201ENST00000403259 LRP5O75197 1615 aa6.06□□□□□ -1.44
HIST1H2APS3-201ENST00000403259 PHLDB1Q86UU1 1377 aa6.06□□□□□ -1.44
HIST1H2APS3-201ENST00000403259 TTBK1Q5TCY1 1321 aaPredicted RBP6.05□□□□□ -1.44
HIST1H2APS3-201ENST00000403259 NCKAP5LQ9HCH0 1330 aa6.05□□□□□ -1.44
HIST1H2APS3-201ENST00000403259 C3P01024 1663 aa6.04□□□□□ -1.44
HIST1H2APS3-201ENST00000403259 MLECQ14165 292 aa6.04□□□□□ -1.44
HIST1H2APS3-201ENST00000403259 SENP3Q9H4L4 574 aaPredicted RBP6.04□□□□□ -1.44
HIST1H2APS3-201ENST00000403259 TCOF1Q13428 1488 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms