RNA–Protein interactions for RNA: ENST00000402458.1

SNU13-204, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 3 BASIC

Gene SNU13, Length 462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-204ENST00000402458 GOLGA3Q08378 1498 aa22.28■■□□□ 1.16
SNU13-204ENST00000402458 CTTNBP2Q8WZ74 1663 aa22.27■■□□□ 1.16
SNU13-204ENST00000402458 EHMT2Q96KQ7 1210 aa22.26■■□□□ 1.15
SNU13-204ENST00000402458 IQGAP2Q13576 1575 aa22.24■■□□□ 1.15
SNU13-204ENST00000402458 UBTFP17480 764 aaKnown RBP22.23■■□□□ 1.15
SNU13-204ENST00000402458 JPH4Q96JJ6 628 aa22.22■■□□□ 1.15
SNU13-204ENST00000402458 SHROOM2Q13796 1616 aa22.2■■□□□ 1.14
SNU13-204ENST00000402458 PRG4Q92954 1404 aaPredicted RBP22.14■■□□□ 1.13
SNU13-204ENST00000402458 ARHGEF11O15085 1522 aa22.13■■□□□ 1.13
SNU13-204ENST00000402458 RIMBP3CA6NJZ7 1639 aa22.11■■□□□ 1.13
SNU13-204ENST00000402458 RIMBP3BA6NNM3 1639 aa22.11■■□□□ 1.13
SNU13-204ENST00000402458 RIMBP3Q9UFD9 1639 aa22.11■■□□□ 1.13
SNU13-204ENST00000402458 UGGT2Q9NYU1 1516 aa22.11■■□□□ 1.13
SNU13-204ENST00000402458 CARMIL2Q6F5E8 1435 aa22.1■■□□□ 1.13
SNU13-204ENST00000402458 ERCC6L2Q5T890 1561 aa22.04■■□□□ 1.12
SNU13-204ENST00000402458 TNIKQ9UKE5 1360 aa22.04■■□□□ 1.12
SNU13-204ENST00000402458 RANGAP1P46060 587 aaPredicted RBP22.04■■□□□ 1.12
SNU13-204ENST00000402458 LOC105371045A0A1W2PR82 267 aa22.02■■□□□ 1.12
SNU13-204ENST00000402458 DISP1Q96F81 1524 aa22.01■■□□□ 1.11
SNU13-204ENST00000402458 KIAA0556O60303 1618 aa22■■□□□ 1.11
SNU13-204ENST00000402458 ARAP1Q96P48 1450 aa21.97■■□□□ 1.11
SNU13-204ENST00000402458 EFCAB5A4FU69 1503 aa21.96■■□□□ 1.11
SNU13-204ENST00000402458 SAMD9Q5K651 1589 aa21.95■■□□□ 1.11
SNU13-204ENST00000402458 CYB5RLQ6IPT4 315 aa21.94■■□□□ 1.1
SNU13-204ENST00000402458 PTPRGP23470 1445 aa21.93■■□□□ 1.1
SNU13-204ENST00000402458 TTBK1Q5TCY1 1321 aaPredicted RBP21.93■■□□□ 1.1
SNU13-204ENST00000402458 P3H3Q8IVL6 736 aa21.93■■□□□ 1.1
SNU13-204ENST00000402458 CLIP1P30622 1438 aa21.89■■□□□ 1.09
SNU13-204ENST00000402458 ARHGAP35Q9NRY4 1499 aa21.86■■□□□ 1.09
SNU13-204ENST00000402458 FHOD3Q2V2M9 1422 aa21.85■■□□□ 1.09
SNU13-204ENST00000402458 CEP162Q5TB80 1403 aa21.85■■□□□ 1.09
SNU13-204ENST00000402458 UACAQ9BZF9 1416 aa21.79■■□□□ 1.08
SNU13-204ENST00000402458 FMN1Q68DA7 1419 aa21.77■■□□□ 1.08
SNU13-204ENST00000402458 NPM1P06748 294 aaKnown RBP eCLIP21.74■■□□□ 1.07
SNU13-204ENST00000402458 ADCY10Q96PN6 1610 aa21.73■■□□□ 1.07
SNU13-204ENST00000402458 UHRF1BP1LA0JNW5 1464 aa21.73■■□□□ 1.07
SNU13-204ENST00000402458 PLB1Q6P1J6 1458 aa21.73■■□□□ 1.07
SNU13-204ENST00000402458 ABCC2Q92887 1545 aa21.73■■□□□ 1.07
SNU13-204ENST00000402458 ABCA8O94911 1581 aa21.73■■□□□ 1.07
SNU13-204ENST00000402458 RAPGEF6Q8TEU7 1601 aa21.71■■□□□ 1.07
SNU13-204ENST00000402458 ATP1B4Q9UN42 357 aaPredicted RBP21.65■■□□□ 1.06
SNU13-204ENST00000402458 HECW1Q76N89 1606 aa21.63■■□□□ 1.05
SNU13-204ENST00000402458 KDM5BQ9UGL1 1544 aa21.61■■□□□ 1.05
SNU13-204ENST00000402458 ZCCHC11Q5TAX3 1644 aaKnown RBP21.6■■□□□ 1.05
SNU13-204ENST00000402458 CASKIN1Q8WXD9 1431 aa21.6■■□□□ 1.05
SNU13-204ENST00000402458 NUP153P49790 1475 aaKnown RBP21.59■■□□□ 1.05
SNU13-204ENST00000402458 FYCO1Q9BQS8 1478 aa21.59■■□□□ 1.05
SNU13-204ENST00000402458 ARID3CA6NKF2 412 aa21.59■■□□□ 1.05
SNU13-204ENST00000402458 PCF11O94913 1555 aaKnown RBP21.59■■□□□ 1.05
SNU13-204ENST00000402458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.58■■□□□ 1.05
SNU13-204ENST00000402458 HNRNPUL2Q1KMD3 747 aaKnown RBP21.58■■□□□ 1.05
SNU13-204ENST00000402458 VPS8Q8N3P4 1428 aa21.57■■□□□ 1.04
SNU13-204ENST00000402458 ATP10BO94823 1461 aa21.55■■□□□ 1.04
SNU13-204ENST00000402458 MAPKBP1O60336 1514 aa21.55■■□□□ 1.04
SNU13-204ENST00000402458 EPRSP07814 1512 aaKnown RBP21.52■■□□□ 1.04
SNU13-204ENST00000402458 CCDC18Q5T9S5 1454 aa21.52■■□□□ 1.03
SNU13-204ENST00000402458 ASXL2Q76L83 1435 aa21.5■■□□□ 1.03
SNU13-204ENST00000402458 CDK11AQ9UQ88 783 aaPredicted RBP21.49■■□□□ 1.03
SNU13-204ENST00000402458 CDK13Q14004 1512 aaKnown RBP21.49■■□□□ 1.03
SNU13-204ENST00000402458 PLEKHD1A6NEE1 506 aa21.47■■□□□ 1.03
SNU13-204ENST00000402458 LRRIQ1Q96JM4 1722 aa21.46■■□□□ 1.03
SNU13-204ENST00000402458 WDR7Q9Y4E6 1490 aa21.45■■□□□ 1.03
SNU13-204ENST00000402458 TRHP20396 242 aaPredicted RBP21.43■■□□□ 1.02
SNU13-204ENST00000402458 APLP2Q06481 763 aa21.43■■□□□ 1.02
SNU13-204ENST00000402458 KCNH8Q96L42 1107 aa21.4■■□□□ 1.02
SNU13-204ENST00000402458 ABCC10Q5T3U5 1492 aa21.39■■□□□ 1.02
SNU13-204ENST00000402458 FAM69CQ0P6D2 419 aa21.37■■□□□ 1.01
SNU13-204ENST00000402458 CFAP43Q8NDM7 1665 aa21.37■■□□□ 1.01
SNU13-204ENST00000402458 DIP2BQ9P265 1576 aa21.36■■□□□ 1.01
SNU13-204ENST00000402458 TROQ12816 1431 aaPredicted RBP21.35■■□□□ 1.01
SNU13-204ENST00000402458 TIAM1Q13009 1591 aa21.35■■□□□ 1.01
SNU13-204ENST00000402458 MTUS2Q5JR59 1369 aa21.35■■□□□ 1.01
SNU13-204ENST00000402458 MAP3K1Q13233 1512 aa21.34■■□□□ 1.01
SNU13-204ENST00000402458 KIF13AQ9H1H9 1805 aa21.34■■□□□ 1.01
SNU13-204ENST00000402458 GLI2P10070 1586 aa21.32■■□□□ 1
SNU13-204ENST00000402458 KIF14Q15058 1648 aa21.3■■□□□ 1
SNU13-204ENST00000402458 EHBP1L1Q8N3D4 1523 aa21.29■■□□□ 1
SNU13-204ENST00000402458 MAGI3Q5TCQ9 1506 aa21.28■■□□□ 1
SNU13-204ENST00000402458 LRRC9Q6ZRR7 1453 aa21.26■□□□□ 0.99
SNU13-204ENST00000402458 ABCA9Q8IUA7 1624 aa21.26■□□□□ 0.99
SNU13-204ENST00000402458 MAP3K4Q9Y6R4 1608 aa21.24■□□□□ 0.99
SNU13-204ENST00000402458 CD109Q6YHK3 1445 aa21.23■□□□□ 0.99
SNU13-204ENST00000402458 TSPOAP1O95153 1857 aa21.23■□□□□ 0.99
SNU13-204ENST00000402458 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.23■□□□□ 0.998e-9■■■■■ 57.3
SNU13-204ENST00000402458 SUPT6HQ7KZ85 1726 aaKnown RBP21.21■□□□□ 0.99
SNU13-204ENST00000402458 KANK4Q5T7N3 995 aaPredicted RBP21.2■□□□□ 0.98
SNU13-204ENST00000402458 TTC37Q6PGP7 1564 aa21.19■□□□□ 0.98
SNU13-204ENST00000402458 MYO5CQ9NQX4 1742 aa21.18■□□□□ 0.98
SNU13-204ENST00000402458 TEX14Q8IWB6 1497 aa21.17■□□□□ 0.98
SNU13-204ENST00000402458 CCNB3Q8WWL7 1395 aa21.14■□□□□ 0.98
SNU13-204ENST00000402458 NCOA2Q15596 1464 aa21.13■□□□□ 0.97
SNU13-204ENST00000402458 PLCH2O75038 1416 aa21.12■□□□□ 0.97
SNU13-204ENST00000402458 PPRC1Q5VV67 1664 aaKnown RBP21.12■□□□□ 0.97
SNU13-204ENST00000402458 CFAP74Q9C0B2 1584 aa21.1■□□□□ 0.97
SNU13-204ENST00000402458 ARAP3Q8WWN8 1544 aa21.1■□□□□ 0.97
SNU13-204ENST00000402458 CDC42BPAQ5VT25 1732 aa21.1■□□□□ 0.97
SNU13-204ENST00000402458 ITSN2Q9NZM3 1697 aa21.1■□□□□ 0.97
SNU13-204ENST00000402458 ARHGAP5Q13017 1502 aa21.09■□□□□ 0.97
SNU13-204ENST00000402458 PREX2Q70Z35 1606 aa21.09■□□□□ 0.97
SNU13-204ENST00000402458 EFCAB2Q5VUJ9 269 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms