RNA–Protein interactions for RNA: ENST00000399756.8

TRPV1-202, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPV1, Length 4,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-202ENST00000399756 SUPT16HQ9Y5B9 1047 aaKnown RBP13.88□□□□□ -0.19
TRPV1-202ENST00000399756 KCNH8Q96L42 1107 aa13.86□□□□□ -0.19
TRPV1-202ENST00000399756 ATAD2BQ9ULI0 1458 aa13.86□□□□□ -0.19
TRPV1-202ENST00000399756 CLSPNQ9HAW4 1339 aa13.84□□□□□ -0.19
TRPV1-202ENST00000399756 MRS2Q9HD23 443 aa13.84□□□□□ -0.19
TRPV1-202ENST00000399756 KDM2AQ9Y2K7 1162 aa13.83□□□□□ -0.2
TRPV1-202ENST00000399756 RAB3GAP2Q9H2M9 1393 aa13.83□□□□□ -0.2
TRPV1-202ENST00000399756 DHX57Q6P158 1386 aaKnown RBP13.79□□□□□ -0.2
TRPV1-202ENST00000399756 EIF4G2P78344 907 aaKnown RBP eCLIP13.79□□□□□ -0.2
TRPV1-202ENST00000399756 DAXXQ9UER7 740 aaPredicted RBP13.77□□□□□ -0.2
TRPV1-202ENST00000399756 FOXD1Q16676 465 aa13.77□□□□□ -0.21
TRPV1-202ENST00000399756 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.76□□□□□ -0.211e-6■■□□□ 14.1
TRPV1-202ENST00000399756 SETD5Q9C0A6 1442 aa13.75□□□□□ -0.21
TRPV1-202ENST00000399756 TDRD9Q8NDG6 1382 aaKnown RBP13.73□□□□□ -0.21
TRPV1-202ENST00000399756 NPM2Q86SE8 214 aaKnown RBP13.73□□□□□ -0.21
TRPV1-202ENST00000399756 RTL5Q5HYW3 569 aaPredicted RBP13.71□□□□□ -0.21
TRPV1-202ENST00000399756 TMC1Q8TDI8 760 aa13.71□□□□□ -0.21
TRPV1-202ENST00000399756 CHMP7Q8WUX9 453 aaPredicted RBP13.71□□□□□ -0.21
TRPV1-202ENST00000399756 FHAD1B1AJZ9 1412 aa13.7□□□□□ -0.22
TRPV1-202ENST00000399756 FHOD3Q2V2M9 1422 aa13.7□□□□□ -0.22
TRPV1-202ENST00000399756 SYNJ1O43426 1573 aa13.69□□□□□ -0.22
TRPV1-202ENST00000399756 RGL3Q3MIN7 710 aa13.67□□□□□ -0.22
TRPV1-202ENST00000399756 PPP1R15AO75807 674 aaPredicted RBP13.67□□□□□ -0.22
TRPV1-202ENST00000399756 TSPY4P0CV99 314 aa13.66□□□□□ -0.22
TRPV1-202ENST00000399756 TSPY10P0CW01 314 aa13.66□□□□□ -0.22
TRPV1-202ENST00000399756 KIF21BO75037 1637 aa13.66□□□□□ -0.22
TRPV1-202ENST00000399756 CCDC136Q96JN2 1154 aa13.65□□□□□ -0.22
TRPV1-202ENST00000399756 CFDP1Q9UEE9 299 aaPredicted RBP13.65□□□□□ -0.22
TRPV1-202ENST00000399756 EIF4G1Q04637 1599 aaKnown RBP13.64□□□□□ -0.23
TRPV1-202ENST00000399756 HSPA5P11021 654 aaKnown RBP13.64□□□□□ -0.23
TRPV1-202ENST00000399756 ARHGAP35Q9NRY4 1499 aa13.63□□□□□ -0.23
TRPV1-202ENST00000399756 CADPSQ9ULU8 1353 aa13.63□□□□□ -0.23
TRPV1-202ENST00000399756 NBR1Q14596 966 aa13.61□□□□□ -0.23
TRPV1-202ENST00000399756 IGF1RP08069 1367 aa13.61□□□□□ -0.23
TRPV1-202ENST00000399756 ARAP1Q96P48 1450 aa13.6□□□□□ -0.23
TRPV1-202ENST00000399756 B4GALNT3Q6L9W6 998 aa13.6□□□□□ -0.23
TRPV1-202ENST00000399756 TSHZ2Q9NRE2 1034 aa13.6□□□□□ -0.23
TRPV1-202ENST00000399756 ANP32AP39687 249 aaKnown RBP13.59□□□□□ -0.23
TRPV1-202ENST00000399756 SENP3Q9H4L4 574 aaPredicted RBP13.59□□□□□ -0.23
TRPV1-202ENST00000399756 BCL11AQ9H165 835 aa13.58□□□□□ -0.24
TRPV1-202ENST00000399756 CHGAP10645 457 aaKnown RBP13.58□□□□□ -0.24
TRPV1-202ENST00000399756 PLEKHD1A6NEE1 506 aa13.57□□□□□ -0.24
TRPV1-202ENST00000399756 TIMELESSQ9UNS1 1208 aa13.57□□□□□ -0.24
TRPV1-202ENST00000399756 ANP32EQ9BTT0 268 aa13.56□□□□□ -0.24
TRPV1-202ENST00000399756 PHLDB1Q86UU1 1377 aa13.56□□□□□ -0.24
TRPV1-202ENST00000399756 CARD11Q9BXL7 1154 aa13.55□□□□□ -0.24
TRPV1-202ENST00000399756 L3MBTL2Q969R5 705 aa13.55□□□□□ -0.24
TRPV1-202ENST00000399756 CCER2I3L3R5 266 aa13.54□□□□□ -0.24
TRPV1-202ENST00000399756 MPHOSPH9Q99550 1183 aa13.54□□□□□ -0.24
TRPV1-202ENST00000399756 RBM19Q9Y4C8 960 aaKnown RBP13.54□□□□□ -0.24
TRPV1-202ENST00000399756 CANXP27824 592 aaKnown RBP13.53□□□□□ -0.24
TRPV1-202ENST00000399756 RAD54L2Q9Y4B4 1467 aa13.52□□□□□ -0.25
TRPV1-202ENST00000399756 FGD5Q6ZNL6 1462 aa13.51□□□□□ -0.25
TRPV1-202ENST00000399756 FMN1Q68DA7 1419 aa13.5□□□□□ -0.25
TRPV1-202ENST00000399756 DCAF11Q8TEB1 546 aa13.49□□□□□ -0.25
TRPV1-202ENST00000399756 PKD2Q13563 968 aa13.49□□□□□ -0.25
TRPV1-202ENST00000399756 FANCD2Q9BXW9 1451 aa13.47□□□□□ -0.25
TRPV1-202ENST00000399756 PPP4R2Q9NY27 417 aa13.47□□□□□ -0.25
TRPV1-202ENST00000399756 PRXQ9BXM0 1461 aa13.47□□□□□ -0.25
TRPV1-202ENST00000399756 CC2D1BQ5T0F9 858 aaKnown RBP13.44□□□□□ -0.26
TRPV1-202ENST00000399756 ZBTB47Q9UFB7 747 aaPredicted RBP13.44□□□□□ -0.26
TRPV1-202ENST00000399756 NCAPD3P42695 1498 aa13.44□□□□□ -0.26
TRPV1-202ENST00000399756 CUX1P39880 1505 aa13.43□□□□□ -0.26
TRPV1-202ENST00000399756 WDR43Q15061 677 aaKnown RBP eCLIP13.43□□□□□ -0.26
TRPV1-202ENST00000399756 BICRAQ9NZM4 1560 aa13.42□□□□□ -0.26
TRPV1-202ENST00000399756 LRRC9Q6ZRR7 1453 aa13.42□□□□□ -0.26
TRPV1-202ENST00000399756 RRBP1Q9P2E9 1410 aaKnown RBP13.41□□□□□ -0.26
TRPV1-202ENST00000399756 ZNF644Q9H582 1327 aaPredicted RBP13.41□□□□□ -0.26
TRPV1-202ENST00000399756 CCDC18Q5T9S5 1454 aa13.4□□□□□ -0.26
TRPV1-202ENST00000399756 TOP2BQ02880 1626 aa13.39□□□□□ -0.27
TRPV1-202ENST00000399756 PDS5BQ9NTI5 1447 aa13.38□□□□□ -0.27
TRPV1-202ENST00000399756 CFTRP13569 1480 aa13.37□□□□□ -0.27
TRPV1-202ENST00000399756 ERICH3Q5RHP9 1530 aa13.37□□□□□ -0.27
TRPV1-202ENST00000399756 FGD6Q6ZV73 1430 aa13.36□□□□□ -0.27
TRPV1-202ENST00000399756 NUP155O75694 1391 aa13.36□□□□□ -0.27
TRPV1-202ENST00000399756 ERCC6Q03468 1493 aa13.35□□□□□ -0.27
TRPV1-202ENST00000399756 HNRNPMP52272 730 aaKnown RBP eCLIP13.35□□□□□ -0.27
TRPV1-202ENST00000399756 NESP48681 1621 aa13.35□□□□□ -0.27
TRPV1-202ENST00000399756 NEUROD2Q15784 382 aa13.34□□□□□ -0.27
TRPV1-202ENST00000399756 PRKRIP1Q9H875 184 aaPredicted RBP13.34□□□□□ -0.27
TRPV1-202ENST00000399756 TNNT2P45379 298 aaPredicted RBP13.33□□□□□ -0.28
TRPV1-202ENST00000399756 KNSTRNQ9Y448 316 aa13.32□□□□□ -0.28
TRPV1-202ENST00000399756 DNAJC5BQ9UF47 199 aa13.31□□□□□ -0.28
TRPV1-202ENST00000399756 LAS1LQ9Y4W2 734 aaKnown RBP13.31□□□□□ -0.28
TRPV1-202ENST00000399756 WASHC2AQ641Q2 1341 aa13.3□□□□□ -0.28
TRPV1-202ENST00000399756 WDR97A6NE52 1622 aa13.3□□□□□ -0.28
TRPV1-202ENST00000399756 ST20-MTHFSA0A0A6YYL1 179 aa13.29□□□□□ -0.28
TRPV1-202ENST00000399756 GAPVD1Q14C86 1478 aa13.29□□□□□ -0.28
TRPV1-202ENST00000399756 UNC13AQ9UPW8 1703 aa13.29□□□□□ -0.28
TRPV1-202ENST00000399756 CCDC184Q52MB2 194 aa13.29□□□□□ -0.28
TRPV1-202ENST00000399756 ARXQ96QS3 562 aa13.29□□□□□ -0.28
TRPV1-202ENST00000399756 RGS3P49796 1198 aa13.28□□□□□ -0.28
TRPV1-202ENST00000399756 JPH4Q96JJ6 628 aa13.28□□□□□ -0.28
TRPV1-202ENST00000399756 MYOM3Q5VTT5 1437 aa13.27□□□□□ -0.28
TRPV1-202ENST00000399756 AQRO60306 1485 aaKnown RBP eCLIP13.27□□□□□ -0.281e-6■■■□□ 17.3
TRPV1-202ENST00000399756 SLC24A1O60721 1099 aa13.27□□□□□ -0.29
TRPV1-202ENST00000399756 UACAQ9BZF9 1416 aa13.26□□□□□ -0.29
TRPV1-202ENST00000399756 NPM1P06748 294 aaKnown RBP eCLIP13.26□□□□□ -0.29
TRPV1-202ENST00000399756 PLPPR3Q6T4P5 718 aa13.26□□□□□ -0.29
TRPV1-202ENST00000399756 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms