RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 EFCAB5A4FU69 1503 aa34.05■■■■□ 3.04
RABGGTA-202ENST00000399409 LRRC9Q6ZRR7 1453 aa34.04■■■■□ 3.04
RABGGTA-202ENST00000399409 CFAP43Q8NDM7 1665 aa34.02■■■■□ 3.04
RABGGTA-202ENST00000399409 WDR97A6NE52 1622 aa33.99■■■■□ 3.03
RABGGTA-202ENST00000399409 URB2Q14146 1524 aaKnown RBP33.97■■■■□ 3.03
RABGGTA-202ENST00000399409 PCF11O94913 1555 aaKnown RBP33.96■■■■□ 3.03
RABGGTA-202ENST00000399409 NEUROD1Q13562 356 aa33.96■■■■□ 3.03
RABGGTA-202ENST00000399409 CTTNBP2Q8WZ74 1663 aa33.95■■■■□ 3.03
RABGGTA-202ENST00000399409 AQRO60306 1485 aaKnown RBP eCLIP33.93■■■■□ 3.024e-7■■■■□ 23.8
RABGGTA-202ENST00000399409 FYCO1Q9BQS8 1478 aa33.92■■■■□ 3.02
RABGGTA-202ENST00000399409 PDS5BQ9NTI5 1447 aa33.9■■■■□ 3.02
RABGGTA-202ENST00000399409 CASKIN1Q8WXD9 1431 aa33.87■■■■□ 3.01
RABGGTA-202ENST00000399409 ABCA5Q8WWZ7 1642 aa33.86■■■■□ 3.01
RABGGTA-202ENST00000399409 FHOD3Q2V2M9 1422 aa33.85■■■■□ 3.01
RABGGTA-202ENST00000399409 PHLDB1Q86UU1 1377 aa33.83■■■■□ 3.01
RABGGTA-202ENST00000399409 P3H3Q8IVL6 736 aa33.81■■■■□ 3
RABGGTA-202ENST00000399409 FMN1Q68DA7 1419 aa33.78■■■■□ 3
RABGGTA-202ENST00000399409 RAB3GAP2Q9H2M9 1393 aa33.78■■■■□ 3
RABGGTA-202ENST00000399409 ITGAEP38570 1179 aa33.78■■■■□ 3
RABGGTA-202ENST00000399409 SETD5Q9C0A6 1442 aa33.76■■■□□ 2.99
RABGGTA-202ENST00000399409 GAPVD1Q14C86 1478 aa33.76■■■□□ 2.99
RABGGTA-202ENST00000399409 MIER1Q8N108 512 aa33.75■■■□□ 2.99
RABGGTA-202ENST00000399409 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.71■■■□□ 2.99
RABGGTA-202ENST00000399409 TDRD9Q8NDG6 1382 aaKnown RBP33.7■■■□□ 2.99
RABGGTA-202ENST00000399409 SAMD9Q5K651 1589 aa33.68■■■□□ 2.98
RABGGTA-202ENST00000399409 ATP1B4Q9UN42 357 aaPredicted RBP33.68■■■□□ 2.98
RABGGTA-202ENST00000399409 KIF21AQ7Z4S6 1674 aa33.67■■■□□ 2.98
RABGGTA-202ENST00000399409 SNAPC4Q5SXM2 1469 aa33.64■■■□□ 2.98
RABGGTA-202ENST00000399409 FAM50AQ14320 339 aaKnown RBP33.63■■■□□ 2.97
RABGGTA-202ENST00000399409 MAPKBP1O60336 1514 aa33.63■■■□□ 2.97
RABGGTA-202ENST00000399409 TARBP1Q13395 1621 aaKnown RBP33.6■■■□□ 2.97
RABGGTA-202ENST00000399409 GTF3C3Q9Y5Q9 886 aa33.59■■■□□ 2.97
RABGGTA-202ENST00000399409 THOC2Q8NI27 1593 aaKnown RBP33.56■■■□□ 2.96
RABGGTA-202ENST00000399409 PELP1Q8IZL8 1130 aaKnown RBP33.54■■■□□ 2.96
RABGGTA-202ENST00000399409 DNAJC5BQ9UF47 199 aa33.5■■■□□ 2.95
RABGGTA-202ENST00000399409 GRIN2BQ13224 1484 aa33.49■■■□□ 2.95
RABGGTA-202ENST00000399409 FGD6Q6ZV73 1430 aa33.49■■■□□ 2.95
RABGGTA-202ENST00000399409 YTHDC1Q96MU7 727 aaKnown RBP33.47■■■□□ 2.95
RABGGTA-202ENST00000399409 MTUS2Q5JR59 1369 aa33.47■■■□□ 2.95
RABGGTA-202ENST00000399409 PBRM1Q86U86 1689 aa33.42■■■□□ 2.94
RABGGTA-202ENST00000399409 TIMELESSQ9UNS1 1208 aa33.41■■■□□ 2.94
RABGGTA-202ENST00000399409 LRRIQ1Q96JM4 1722 aa33.4■■■□□ 2.94
RABGGTA-202ENST00000399409 MRC2Q9UBG0 1479 aa33.38■■■□□ 2.93
RABGGTA-202ENST00000399409 EHBP1L1Q8N3D4 1523 aa33.38■■■□□ 2.93
RABGGTA-202ENST00000399409 SUPT6HQ7KZ85 1726 aaKnown RBP33.35■■■□□ 2.93
RABGGTA-202ENST00000399409 NCOA2Q15596 1464 aa33.33■■■□□ 2.93
RABGGTA-202ENST00000399409 CCDC18Q5T9S5 1454 aa33.33■■■□□ 2.93
RABGGTA-202ENST00000399409 ADAMTS12P58397 1594 aa33.33■■■□□ 2.93
RABGGTA-202ENST00000399409 MYOM3Q5VTT5 1437 aa33.32■■■□□ 2.92
RABGGTA-202ENST00000399409 IQGAP2Q13576 1575 aa33.29■■■□□ 2.92
RABGGTA-202ENST00000399409 HFM1A2PYH4 1435 aa33.27■■■□□ 2.92
RABGGTA-202ENST00000399409 HECW1Q76N89 1606 aa33.25■■■□□ 2.91
RABGGTA-202ENST00000399409 ARHGEF11O15085 1522 aa33.24■■■□□ 2.91
RABGGTA-202ENST00000399409 UGGT2Q9NYU1 1516 aa33.24■■■□□ 2.91
RABGGTA-202ENST00000399409 SIN3AQ96ST3 1273 aa33.22■■■□□ 2.91
RABGGTA-202ENST00000399409 IFT140Q96RY7 1462 aa33.2■■■□□ 2.91
RABGGTA-202ENST00000399409 PTPN23Q9H3S7 1636 aa33.2■■■□□ 2.9
RABGGTA-202ENST00000399409 PTPRKQ15262 1439 aa33.18■■■□□ 2.9
RABGGTA-202ENST00000399409 UACAQ9BZF9 1416 aa33.16■■■□□ 2.9
RABGGTA-202ENST00000399409 MAGI3Q5TCQ9 1506 aa33.14■■■□□ 2.9
RABGGTA-202ENST00000399409 WDR62O43379 1518 aa33.13■■■□□ 2.89
RABGGTA-202ENST00000399409 TCOF1Q13428 1488 aaKnown RBP33.12■■■□□ 2.89
RABGGTA-202ENST00000399409 NAIPQ13075 1403 aa33.11■■■□□ 2.89
RABGGTA-202ENST00000399409 EPRSP07814 1512 aaKnown RBP33.1■■■□□ 2.89
RABGGTA-202ENST00000399409 PPP1R15AO75807 674 aaPredicted RBP33.08■■■□□ 2.89
RABGGTA-202ENST00000399409 MIA2Q96PC5 1412 aa33.02■■■□□ 2.88
RABGGTA-202ENST00000399409 KIAA0586Q9BVV6 1533 aa33.01■■■□□ 2.87
RABGGTA-202ENST00000399409 ZNF608Q9ULD9 1512 aaPredicted RBP33.01■■■□□ 2.87
RABGGTA-202ENST00000399409 AKNAQ7Z591 1439 aa33■■■□□ 2.87
RABGGTA-202ENST00000399409 TONSLQ96HA7 1378 aa32.98■■■□□ 2.87
RABGGTA-202ENST00000399409 GCC2Q8IWJ2 1684 aa32.96■■■□□ 2.87
RABGGTA-202ENST00000399409 CDK13Q14004 1512 aaKnown RBP32.94■■■□□ 2.86
RABGGTA-202ENST00000399409 KIAA0556O60303 1618 aa32.93■■■□□ 2.86
RABGGTA-202ENST00000399409 DISP1Q96F81 1524 aa32.89■■■□□ 2.86
RABGGTA-202ENST00000399409 GRIN2AQ12879 1464 aa32.88■■■□□ 2.85
RABGGTA-202ENST00000399409 EIF4G3O43432 1585 aaKnown RBP32.87■■■□□ 2.85
RABGGTA-202ENST00000399409 DDX10Q13206 875 aaKnown RBP32.82■■■□□ 2.85
RABGGTA-202ENST00000399409 MAGI1Q96QZ7 1491 aaPredicted RBP32.8■■■□□ 2.84
RABGGTA-202ENST00000399409 RRP7BPQ9NSQ0 103 aa32.8■■■□□ 2.84
RABGGTA-202ENST00000399409 RAPGEF6Q8TEU7 1601 aa32.8■■■□□ 2.84
RABGGTA-202ENST00000399409 NUP153P49790 1475 aaKnown RBP32.77■■■□□ 2.84
RABGGTA-202ENST00000399409 CHIC2Q9UKJ5 165 aa32.75■■■□□ 2.83
RABGGTA-202ENST00000399409 ERCC6Q03468 1493 aa32.74■■■□□ 2.83
RABGGTA-202ENST00000399409 ROCK1Q13464 1354 aa32.73■■■□□ 2.83
RABGGTA-202ENST00000399409 CDK11AQ9UQ88 783 aaPredicted RBP32.73■■■□□ 2.83
RABGGTA-202ENST00000399409 KDM5BQ9UGL1 1544 aa32.72■■■□□ 2.83
RABGGTA-202ENST00000399409 SYNJ2O15056 1496 aa32.69■■■□□ 2.82
RABGGTA-202ENST00000399409 DAPK1P53355 1430 aa32.68■■■□□ 2.82
RABGGTA-202ENST00000399409 KDM6BO15054 1643 aa32.68■■■□□ 2.82
RABGGTA-202ENST00000399409 DNMT1P26358 1616 aaKnown RBP32.68■■■□□ 2.82
RABGGTA-202ENST00000399409 DENND4BO75064 1496 aaPredicted RBP32.68■■■□□ 2.82
RABGGTA-202ENST00000399409 ARID3CA6NKF2 412 aa32.67■■■□□ 2.82
RABGGTA-202ENST00000399409 TRIM52Q96A61 297 aa32.67■■■□□ 2.82
RABGGTA-202ENST00000399409 CCER2I3L3R5 266 aa32.66■■■□□ 2.82
RABGGTA-202ENST00000399409 CEP170Q5SW79 1584 aa32.63■■■□□ 2.81
RABGGTA-202ENST00000399409 KCNH8Q96L42 1107 aa32.62■■■□□ 2.81
RABGGTA-202ENST00000399409 HIRIP3Q9BW71 556 aaPredicted RBP32.62■■■□□ 2.81
RABGGTA-202ENST00000399409 CHMP7Q8WUX9 453 aaPredicted RBP32.61■■■□□ 2.81
RABGGTA-202ENST00000399409 MPHOSPH9Q99550 1183 aa32.61■■■□□ 2.81
RABGGTA-202ENST00000399409 ABCC5O15440 1437 aa32.61■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms