RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 CFAP43Q8NDM7 1665 aa16.81■□□□□ 0.28
C4orf3-201ENST00000399075 LAMC3Q9Y6N6 1575 aa16.8■□□□□ 0.28
C4orf3-201ENST00000399075 NEUROD1Q13562 356 aa16.8■□□□□ 0.28
C4orf3-201ENST00000399075 EFCAB5A4FU69 1503 aa16.79■□□□□ 0.28
C4orf3-201ENST00000399075 LRRC9Q6ZRR7 1453 aa16.78■□□□□ 0.28
C4orf3-201ENST00000399075 WDR97A6NE52 1622 aa16.77■□□□□ 0.28
C4orf3-201ENST00000399075 RAD54L2Q9Y4B4 1467 aa16.76■□□□□ 0.27
C4orf3-201ENST00000399075 CTTNBP2Q8WZ74 1663 aa16.75■□□□□ 0.27
C4orf3-201ENST00000399075 PCF11O94913 1555 aaKnown RBP16.75■□□□□ 0.27
C4orf3-201ENST00000399075 NESP48681 1621 aa16.74■□□□□ 0.27
C4orf3-201ENST00000399075 AQRO60306 1485 aaKnown RBP eCLIP16.74■□□□□ 0.273e-6■■■□□ 17.9
C4orf3-201ENST00000399075 FYCO1Q9BQS8 1478 aa16.73■□□□□ 0.27
C4orf3-201ENST00000399075 URB2Q14146 1524 aaKnown RBP16.69■□□□□ 0.26
C4orf3-201ENST00000399075 ABCA5Q8WWZ7 1642 aa16.69■□□□□ 0.26
C4orf3-201ENST00000399075 CASKIN1Q8WXD9 1431 aa16.68■□□□□ 0.26
C4orf3-201ENST00000399075 PHLDB1Q86UU1 1377 aa16.66■□□□□ 0.26
C4orf3-201ENST00000399075 MIER1Q8N108 512 aa16.65■□□□□ 0.26
C4orf3-201ENST00000399075 RAB3GAP2Q9H2M9 1393 aa16.65■□□□□ 0.26
C4orf3-201ENST00000399075 FHOD3Q2V2M9 1422 aa16.65■□□□□ 0.26
C4orf3-201ENST00000399075 BCL11AQ9H165 835 aa16.64■□□□□ 0.25
C4orf3-201ENST00000399075 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.64■□□□□ 0.25
C4orf3-201ENST00000399075 SETD5Q9C0A6 1442 aa16.63■□□□□ 0.25
C4orf3-201ENST00000399075 PDS5BQ9NTI5 1447 aa16.63■□□□□ 0.25
C4orf3-201ENST00000399075 FMN1Q68DA7 1419 aa16.63■□□□□ 0.25
C4orf3-201ENST00000399075 MAPKBP1O60336 1514 aa16.63■□□□□ 0.25
C4orf3-201ENST00000399075 SAMD9Q5K651 1589 aa16.62■□□□□ 0.25
C4orf3-201ENST00000399075 GTF3C3Q9Y5Q9 886 aa16.61■□□□□ 0.25
C4orf3-201ENST00000399075 SNAPC4Q5SXM2 1469 aa16.6■□□□□ 0.25
C4orf3-201ENST00000399075 GAPVD1Q14C86 1478 aa16.59■□□□□ 0.25
C4orf3-201ENST00000399075 THOC2Q8NI27 1593 aaKnown RBP16.57■□□□□ 0.24
C4orf3-201ENST00000399075 ITGAEP38570 1179 aa16.56■□□□□ 0.24
C4orf3-201ENST00000399075 P3H3Q8IVL6 736 aa16.56■□□□□ 0.24
C4orf3-201ENST00000399075 KIF21AQ7Z4S6 1674 aa16.55■□□□□ 0.24
C4orf3-201ENST00000399075 TARBP1Q13395 1621 aaKnown RBP16.54■□□□□ 0.24
C4orf3-201ENST00000399075 TDRD9Q8NDG6 1382 aaKnown RBP16.52■□□□□ 0.24
C4orf3-201ENST00000399075 FAM50AQ14320 339 aaKnown RBP16.51■□□□□ 0.23
C4orf3-201ENST00000399075 GRIN2BQ13224 1484 aa16.51■□□□□ 0.23
C4orf3-201ENST00000399075 FGD6Q6ZV73 1430 aa16.5■□□□□ 0.23
C4orf3-201ENST00000399075 LRRIQ1Q96JM4 1722 aa16.49■□□□□ 0.23
C4orf3-201ENST00000399075 YTHDC1Q96MU7 727 aaKnown RBP16.49■□□□□ 0.23
C4orf3-201ENST00000399075 TIMELESSQ9UNS1 1208 aa16.48■□□□□ 0.23
C4orf3-201ENST00000399075 ATP1B4Q9UN42 357 aaPredicted RBP16.47■□□□□ 0.23
C4orf3-201ENST00000399075 PBRM1Q86U86 1689 aa16.46■□□□□ 0.23
C4orf3-201ENST00000399075 EHBP1L1Q8N3D4 1523 aa16.46■□□□□ 0.23
C4orf3-201ENST00000399075 MTUS2Q5JR59 1369 aa16.45■□□□□ 0.22
C4orf3-201ENST00000399075 SUPT6HQ7KZ85 1726 aaKnown RBP16.45■□□□□ 0.22
C4orf3-201ENST00000399075 CCDC18Q5T9S5 1454 aa16.43■□□□□ 0.22
C4orf3-201ENST00000399075 NCOA2Q15596 1464 aa16.42■□□□□ 0.22
C4orf3-201ENST00000399075 MYOM3Q5VTT5 1437 aa16.42■□□□□ 0.22
C4orf3-201ENST00000399075 ARHGEF11O15085 1522 aa16.41■□□□□ 0.22
C4orf3-201ENST00000399075 ADAMTS12P58397 1594 aa16.41■□□□□ 0.22
C4orf3-201ENST00000399075 HFM1A2PYH4 1435 aa16.41■□□□□ 0.22
C4orf3-201ENST00000399075 UGGT2Q9NYU1 1516 aa16.39■□□□□ 0.21
C4orf3-201ENST00000399075 IQGAP2Q13576 1575 aa16.39■□□□□ 0.21
C4orf3-201ENST00000399075 MRC2Q9UBG0 1479 aa16.39■□□□□ 0.21
C4orf3-201ENST00000399075 HECW1Q76N89 1606 aa16.39■□□□□ 0.21
C4orf3-201ENST00000399075 PTPN23Q9H3S7 1636 aa16.39■□□□□ 0.21
C4orf3-201ENST00000399075 DNAJC5BQ9UF47 199 aa16.37■□□□□ 0.21
C4orf3-201ENST00000399075 UACAQ9BZF9 1416 aa16.36■□□□□ 0.21
C4orf3-201ENST00000399075 PTPRKQ15262 1439 aa16.35■□□□□ 0.21
C4orf3-201ENST00000399075 TCOF1Q13428 1488 aaKnown RBP16.34■□□□□ 0.21
C4orf3-201ENST00000399075 MAGI3Q5TCQ9 1506 aa16.34■□□□□ 0.21
C4orf3-201ENST00000399075 SIN3AQ96ST3 1273 aa16.33■□□□□ 0.21
C4orf3-201ENST00000399075 NAIPQ13075 1403 aa16.32■□□□□ 0.2
C4orf3-201ENST00000399075 IFT140Q96RY7 1462 aa16.3■□□□□ 0.2
C4orf3-201ENST00000399075 WDR62O43379 1518 aa16.3■□□□□ 0.2
C4orf3-201ENST00000399075 AKNAQ7Z591 1439 aa16.3■□□□□ 0.2
C4orf3-201ENST00000399075 EPRSP07814 1512 aaKnown RBP16.3■□□□□ 0.2
C4orf3-201ENST00000399075 GCC2Q8IWJ2 1684 aa16.3■□□□□ 0.2
C4orf3-201ENST00000399075 PPP1R15AO75807 674 aaPredicted RBP16.29■□□□□ 0.2
C4orf3-201ENST00000399075 MIA2Q96PC5 1412 aa16.27■□□□□ 0.19
C4orf3-201ENST00000399075 TONSLQ96HA7 1378 aa16.24■□□□□ 0.19
C4orf3-201ENST00000399075 KIAA0586Q9BVV6 1533 aa16.23■□□□□ 0.19
C4orf3-201ENST00000399075 KIAA0556O60303 1618 aa16.22■□□□□ 0.19
C4orf3-201ENST00000399075 CDK13Q14004 1512 aaKnown RBP16.21■□□□□ 0.19
C4orf3-201ENST00000399075 ZNF608Q9ULD9 1512 aaPredicted RBP16.2■□□□□ 0.18
C4orf3-201ENST00000399075 ERICH6Q7L0X2 663 aa16.19■□□□□ 0.18
C4orf3-201ENST00000399075 KDM5BQ9UGL1 1544 aa16.19■□□□□ 0.18
C4orf3-201ENST00000399075 DISP1Q96F81 1524 aa16.19■□□□□ 0.18
C4orf3-201ENST00000399075 EIF4G3O43432 1585 aaKnown RBP16.17■□□□□ 0.18
C4orf3-201ENST00000399075 GRIN2AQ12879 1464 aa16.17■□□□□ 0.18
C4orf3-201ENST00000399075 DDX10Q13206 875 aaKnown RBP16.16■□□□□ 0.18
C4orf3-201ENST00000399075 RAPGEF6Q8TEU7 1601 aa16.15■□□□□ 0.18
C4orf3-201ENST00000399075 DENND4BO75064 1496 aaPredicted RBP16.14■□□□□ 0.17
C4orf3-201ENST00000399075 ROCK1Q13464 1354 aa16.13■□□□□ 0.17
C4orf3-201ENST00000399075 NUP153P49790 1475 aaKnown RBP16.13■□□□□ 0.17
C4orf3-201ENST00000399075 MAGI1Q96QZ7 1491 aaPredicted RBP16.13■□□□□ 0.17
C4orf3-201ENST00000399075 DNMT1P26358 1616 aaKnown RBP16.12■□□□□ 0.17
C4orf3-201ENST00000399075 KDM6BO15054 1643 aa16.12■□□□□ 0.17
C4orf3-201ENST00000399075 CCER2I3L3R5 266 aa16.12■□□□□ 0.17
C4orf3-201ENST00000399075 RRP7BPQ9NSQ0 103 aa16.1■□□□□ 0.17
C4orf3-201ENST00000399075 DAPK1P53355 1430 aa16.09■□□□□ 0.17
C4orf3-201ENST00000399075 SUPT16HQ9Y5B9 1047 aaKnown RBP16.09■□□□□ 0.17
C4orf3-201ENST00000399075 KCNH8Q96L42 1107 aa16.08■□□□□ 0.17
C4orf3-201ENST00000399075 SYNJ2O15056 1496 aa16.06■□□□□ 0.16
C4orf3-201ENST00000399075 CHIC2Q9UKJ5 165 aa16.06■□□□□ 0.16
C4orf3-201ENST00000399075 ABCC5O15440 1437 aa16.06■□□□□ 0.16
C4orf3-201ENST00000399075 ANP32CO43423 234 aa16.05■□□□□ 0.16
C4orf3-201ENST00000399075 ITSN2Q9NZM3 1697 aa16.05■□□□□ 0.16
C4orf3-201ENST00000399075 ADCY10Q96PN6 1610 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms