RNA–Protein interactions for RNA: ENST00000399069.7

LCMT1-203, Transcript of leucine carboxyl methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCMT1, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-203ENST00000399069 CHD1O14646 1710 aa23.32■■□□□ 1.32
LCMT1-203ENST00000399069 IQGAP2Q13576 1575 aa23.3■■□□□ 1.32
LCMT1-203ENST00000399069 EFCAB5A4FU69 1503 aa23.28■■□□□ 1.32
LCMT1-203ENST00000399069 CEP170Q5SW79 1584 aa23.26■■□□□ 1.31
LCMT1-203ENST00000399069 NUP160Q12769 1436 aa23.26■■□□□ 1.31
LCMT1-203ENST00000399069 KIAA0586Q9BVV6 1533 aa23.25■■□□□ 1.31
LCMT1-203ENST00000399069 FBLN2P98095 1184 aa23.23■■□□□ 1.31
LCMT1-203ENST00000399069 ARHGAP35Q9NRY4 1499 aa23.22■■□□□ 1.31
LCMT1-203ENST00000399069 SAMD9Q5K651 1589 aa23.2■■□□□ 1.3
LCMT1-203ENST00000399069 RANGAP1P46060 587 aaPredicted RBP23.19■■□□□ 1.3
LCMT1-203ENST00000399069 ARAP1Q96P48 1450 aa23.18■■□□□ 1.3
LCMT1-203ENST00000399069 UGGT2Q9NYU1 1516 aa23.17■■□□□ 1.3
LCMT1-203ENST00000399069 VPS8Q8N3P4 1428 aa23.16■■□□□ 1.3
LCMT1-203ENST00000399069 KIAA0556O60303 1618 aa23.06■■□□□ 1.28
LCMT1-203ENST00000399069 FHOD3Q2V2M9 1422 aa23.05■■□□□ 1.28
LCMT1-203ENST00000399069 CLASP1Q7Z460 1538 aa23.03■■□□□ 1.28
LCMT1-203ENST00000399069 SHROOM2Q13796 1616 aa23.03■■□□□ 1.28
LCMT1-203ENST00000399069 FMN1Q68DA7 1419 aa23.02■■□□□ 1.28
LCMT1-203ENST00000399069 DISP1Q96F81 1524 aa23.01■■□□□ 1.27
LCMT1-203ENST00000399069 CARMIL2Q6F5E8 1435 aa23■■□□□ 1.27
LCMT1-203ENST00000399069 P3H3Q8IVL6 736 aa22.97■■□□□ 1.27
LCMT1-203ENST00000399069 JPH4Q96JJ6 628 aa22.97■■□□□ 1.27
LCMT1-203ENST00000399069 PCF11O94913 1555 aaKnown RBP22.96■■□□□ 1.27
LCMT1-203ENST00000399069 FYCO1Q9BQS8 1478 aa22.94■■□□□ 1.26
LCMT1-203ENST00000399069 CASKIN1Q8WXD9 1431 aa22.91■■□□□ 1.26
LCMT1-203ENST00000399069 APLP2Q06481 763 aa22.89■■□□□ 1.26
LCMT1-203ENST00000399069 PRG4Q92954 1404 aaPredicted RBP22.89■■□□□ 1.25
LCMT1-203ENST00000399069 HECW1Q76N89 1606 aa22.87■■□□□ 1.25
LCMT1-203ENST00000399069 MAP3K1Q13233 1512 aa22.86■■□□□ 1.25
LCMT1-203ENST00000399069 CFAP43Q8NDM7 1665 aa22.86■■□□□ 1.25
LCMT1-203ENST00000399069 OSCARQ8IYS5 282 aa22.84■■□□□ 1.25
LCMT1-203ENST00000399069 TIAM1Q13009 1591 aa22.82■■□□□ 1.24
LCMT1-203ENST00000399069 RAPGEF6Q8TEU7 1601 aa22.82■■□□□ 1.24
LCMT1-203ENST00000399069 CCDC18Q5T9S5 1454 aa22.78■■□□□ 1.24
LCMT1-203ENST00000399069 LRRIQ1Q96JM4 1722 aa22.77■■□□□ 1.24
LCMT1-203ENST00000399069 ERCC6L2Q5T890 1561 aa22.75■■□□□ 1.23
LCMT1-203ENST00000399069 ABCA8O94911 1581 aa22.73■■□□□ 1.23
LCMT1-203ENST00000399069 PTPRGP23470 1445 aa22.72■■□□□ 1.23
LCMT1-203ENST00000399069 ATP1B4Q9UN42 357 aaPredicted RBP22.72■■□□□ 1.23
LCMT1-203ENST00000399069 EPRSP07814 1512 aaKnown RBP22.69■■□□□ 1.22
LCMT1-203ENST00000399069 PLB1Q6P1J6 1458 aa22.68■■□□□ 1.22
LCMT1-203ENST00000399069 NUP153P49790 1475 aaKnown RBP22.68■■□□□ 1.22
LCMT1-203ENST00000399069 LRRC9Q6ZRR7 1453 aa22.68■■□□□ 1.22
LCMT1-203ENST00000399069 TTBK1Q5TCY1 1321 aaPredicted RBP22.67■■□□□ 1.22
LCMT1-203ENST00000399069 PPARGC1BQ86YN6 1023 aaKnown RBP22.65■■□□□ 1.22
LCMT1-203ENST00000399069 EHBP1L1Q8N3D4 1523 aa22.63■■□□□ 1.21
LCMT1-203ENST00000399069 UACAQ9BZF9 1416 aa22.62■■□□□ 1.21
LCMT1-203ENST00000399069 CDK13Q14004 1512 aaKnown RBP22.61■■□□□ 1.21
LCMT1-203ENST00000399069 TRIM26Q12899 539 aaPredicted RBP22.61■■□□□ 1.21
LCMT1-203ENST00000399069 ABCC2Q92887 1545 aa22.61■■□□□ 1.21
LCMT1-203ENST00000399069 KANK4Q5T7N3 995 aaPredicted RBP22.6■■□□□ 1.21
LCMT1-203ENST00000399069 MTUS2Q5JR59 1369 aa22.58■■□□□ 1.21
LCMT1-203ENST00000399069 UHRF1BP1LA0JNW5 1464 aa22.57■■□□□ 1.2
LCMT1-203ENST00000399069 SUPT6HQ7KZ85 1726 aaKnown RBP22.56■■□□□ 1.2
LCMT1-203ENST00000399069 ARHGEF11O15085 1522 aa22.53■■□□□ 1.2
LCMT1-203ENST00000399069 CDK11AQ9UQ88 783 aaPredicted RBP22.52■■□□□ 1.2
LCMT1-203ENST00000399069 MAGI3Q5TCQ9 1506 aa22.52■■□□□ 1.2
LCMT1-203ENST00000399069 ATP10BO94823 1461 aa22.5■■□□□ 1.19
LCMT1-203ENST00000399069 ADCY10Q96PN6 1610 aa22.47■■□□□ 1.19
LCMT1-203ENST00000399069 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.47■■□□□ 1.19
LCMT1-203ENST00000399069 HNRNPUL2Q1KMD3 747 aaKnown RBP22.47■■□□□ 1.19
LCMT1-203ENST00000399069 RIMBP3CA6NJZ7 1639 aa22.46■■□□□ 1.19
LCMT1-203ENST00000399069 RIMBP3BA6NNM3 1639 aa22.46■■□□□ 1.19
LCMT1-203ENST00000399069 ZCCHC11Q5TAX3 1644 aaKnown RBP22.46■■□□□ 1.19
LCMT1-203ENST00000399069 RIMBP3Q9UFD9 1639 aa22.46■■□□□ 1.19
LCMT1-203ENST00000399069 TROQ12816 1431 aaPredicted RBP22.46■■□□□ 1.19
LCMT1-203ENST00000399069 ARID3CA6NKF2 412 aa22.46■■□□□ 1.19
LCMT1-203ENST00000399069 KDM5BQ9UGL1 1544 aa22.45■■□□□ 1.18
LCMT1-203ENST00000399069 NCOA2Q15596 1464 aa22.44■■□□□ 1.18
LCMT1-203ENST00000399069 PCGF6Q9BYE7 350 aa22.43■■□□□ 1.18
LCMT1-203ENST00000399069 KIF14Q15058 1648 aa22.42■■□□□ 1.18
LCMT1-203ENST00000399069 RRBP1Q9P2E9 1410 aaKnown RBP22.41■■□□□ 1.18
LCMT1-203ENST00000399069 PLEKHD1A6NEE1 506 aa22.38■■□□□ 1.17
LCMT1-203ENST00000399069 PHLDB1Q86UU1 1377 aa22.38■■□□□ 1.17
LCMT1-203ENST00000399069 ITSN2Q9NZM3 1697 aa22.36■■□□□ 1.17
LCMT1-203ENST00000399069 MYOM3Q5VTT5 1437 aa22.35■■□□□ 1.17
LCMT1-203ENST00000399069 CCNB3Q8WWL7 1395 aa22.34■■□□□ 1.17
LCMT1-203ENST00000399069 FGD6Q6ZV73 1430 aa22.32■■□□□ 1.16
LCMT1-203ENST00000399069 MIA2Q96PC5 1412 aa22.28■■□□□ 1.16
LCMT1-203ENST00000399069 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.27■■□□□ 1.16
LCMT1-203ENST00000399069 PTPN23Q9H3S7 1636 aa22.26■■□□□ 1.15
LCMT1-203ENST00000399069 ABCC10Q5T3U5 1492 aa22.26■■□□□ 1.15
LCMT1-203ENST00000399069 NPM1P06748 294 aaKnown RBP eCLIP22.25■■□□□ 1.15
LCMT1-203ENST00000399069 WDR7Q9Y4E6 1490 aa22.25■■□□□ 1.15
LCMT1-203ENST00000399069 CDC42BPAQ5VT25 1732 aa22.25■■□□□ 1.15
LCMT1-203ENST00000399069 TCOF1Q13428 1488 aaKnown RBP22.22■■□□□ 1.15
LCMT1-203ENST00000399069 MYO5CQ9NQX4 1742 aa22.21■■□□□ 1.15
LCMT1-203ENST00000399069 PREX2Q70Z35 1606 aa22.21■■□□□ 1.15
LCMT1-203ENST00000399069 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.2■■□□□ 1.14
LCMT1-203ENST00000399069 GPATCH8Q9UKJ3 1502 aaKnown RBP22.2■■□□□ 1.14
LCMT1-203ENST00000399069 TTC37Q6PGP7 1564 aa22.2■■□□□ 1.14
LCMT1-203ENST00000399069 ASXL2Q76L83 1435 aa22.19■■□□□ 1.14
LCMT1-203ENST00000399069 CYB5RLQ6IPT4 315 aa22.19■■□□□ 1.14
LCMT1-203ENST00000399069 MAPKBP1O60336 1514 aa22.18■■□□□ 1.14
LCMT1-203ENST00000399069 FAM50AQ14320 339 aaKnown RBP22.16■■□□□ 1.14
LCMT1-203ENST00000399069 ABCA9Q8IUA7 1624 aa22.15■■□□□ 1.14
LCMT1-203ENST00000399069 CDC42BPBQ9Y5S2 1711 aa22.14■■□□□ 1.14
LCMT1-203ENST00000399069 CFDP1Q9UEE9 299 aaPredicted RBP22.12■■□□□ 1.13
LCMT1-203ENST00000399069 ARAP3Q8WWN8 1544 aa22.11■■□□□ 1.13
LCMT1-203ENST00000399069 CAMSAP2Q08AD1 1489 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms