RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 NPM1P06748 294 aaKnown RBP eCLIP12.7□□□□□ -0.38
CDH23-203ENST00000398788 ATAD2BQ9ULI0 1458 aa12.69□□□□□ -0.38
CDH23-203ENST00000398788 NEFMP07197 916 aa12.69□□□□□ -0.38
CDH23-203ENST00000398788 CHMP7Q8WUX9 453 aaPredicted RBP12.69□□□□□ -0.38
CDH23-203ENST00000398788 PODXL2Q9NZ53 605 aa12.69□□□□□ -0.38
CDH23-203ENST00000398788 CC2D2AQ9P2K1 1620 aa12.68□□□□□ -0.38
CDH23-203ENST00000398788 LAS1LQ9Y4W2 734 aaKnown RBP12.67□□□□□ -0.38
CDH23-203ENST00000398788 HNRNPUQ00839 825 aaKnown RBP eCLIP12.67□□□□□ -0.38
CDH23-203ENST00000398788 VSIG10Q8N0Z9 540 aa12.67□□□□□ -0.38
CDH23-203ENST00000398788 SLC24A1O60721 1099 aa12.66□□□□□ -0.38
CDH23-203ENST00000398788 KCNH8Q96L42 1107 aa12.66□□□□□ -0.38
CDH23-203ENST00000398788 SMARCA2P51531 1590 aa12.66□□□□□ -0.38
CDH23-203ENST00000398788 CHIC2Q9UKJ5 165 aa12.64□□□□□ -0.39
CDH23-203ENST00000398788 FANCIQ9NVI1 1328 aa12.64□□□□□ -0.39
CDH23-203ENST00000398788 PEG3Q9GZU2 1588 aa12.64□□□□□ -0.39
CDH23-203ENST00000398788 HIRIP3Q9BW71 556 aaPredicted RBP12.63□□□□□ -0.39
CDH23-203ENST00000398788 BAZ1BQ9UIG0 1483 aaKnown RBP12.63□□□□□ -0.39
CDH23-203ENST00000398788 DNAJC5BQ9UF47 199 aa12.62□□□□□ -0.39
CDH23-203ENST00000398788 TOP2AP11388 1531 aaKnown RBP12.59□□□□□ -0.39
CDH23-203ENST00000398788 NCAPD3P42695 1498 aa12.59□□□□□ -0.39
CDH23-203ENST00000398788 PLPPR3Q6T4P5 718 aa12.59□□□□□ -0.39
CDH23-203ENST00000398788 ARXQ96QS3 562 aa12.59□□□□□ -0.39
CDH23-203ENST00000398788 B4GALNT3Q6L9W6 998 aa12.58□□□□□ -0.39
CDH23-203ENST00000398788 CHGAP10645 457 aaKnown RBP12.58□□□□□ -0.4
CDH23-203ENST00000398788 FAM9BQ8IZU0 186 aa12.56□□□□□ -0.4
CDH23-203ENST00000398788 A0A0U1RQG5 324 aaPredicted RBP12.56□□□□□ -0.4
CDH23-203ENST00000398788 CANXP27824 592 aaKnown RBP12.56□□□□□ -0.4
CDH23-203ENST00000398788 PLEKHG5O94827 1062 aa12.55□□□□□ -0.4
CDH23-203ENST00000398788 HMGXB3Q12766 1538 aa12.54□□□□□ -0.4
CDH23-203ENST00000398788 ESF1Q9H501 851 aaKnown RBP12.54□□□□□ -0.4
CDH23-203ENST00000398788 SENP3Q9H4L4 574 aaPredicted RBP12.53□□□□□ -0.4
CDH23-203ENST00000398788 NAP1L5Q96NT1 182 aaPredicted RBP12.53□□□□□ -0.4
CDH23-203ENST00000398788 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.52□□□□□ -0.4
CDH23-203ENST00000398788 SENP3-EIF4A1A0A087X0R7 540 aa12.52□□□□□ -0.41
CDH23-203ENST00000398788 TONSLQ96HA7 1378 aa12.51□□□□□ -0.41
CDH23-203ENST00000398788 PPP4R2Q9NY27 417 aa12.5□□□□□ -0.41
CDH23-203ENST00000398788 CCDC88BA6NC98 1476 aa12.5□□□□□ -0.41
CDH23-203ENST00000398788 PAK3O75914 559 aaPredicted RBP12.49□□□□□ -0.41
CDH23-203ENST00000398788 KDM2AQ9Y2K7 1162 aa12.49□□□□□ -0.41
CDH23-203ENST00000398788 ARID4BQ4LE39 1312 aaPredicted RBP12.49□□□□□ -0.41
CDH23-203ENST00000398788 WRNQ14191 1432 aaPredicted RBP eCLIP12.48□□□□□ -0.41
CDH23-203ENST00000398788 ERCC6Q03468 1493 aa12.48□□□□□ -0.41
CDH23-203ENST00000398788 BRPF3Q9ULD4 1205 aa12.46□□□□□ -0.42
CDH23-203ENST00000398788 RSPH6AQ9H0K4 717 aa12.45□□□□□ -0.42
CDH23-203ENST00000398788 IPO9Q96P70 1041 aaKnown RBP12.44□□□□□ -0.42
CDH23-203ENST00000398788 TSPY4P0CV99 314 aa12.44□□□□□ -0.42
CDH23-203ENST00000398788 TSPY10P0CW01 314 aa12.44□□□□□ -0.42
CDH23-203ENST00000398788 PPM1GO15355 546 aaPredicted RBP12.43□□□□□ -0.42
CDH23-203ENST00000398788 RRP7BPQ9NSQ0 103 aa12.42□□□□□ -0.42
CDH23-203ENST00000398788 MTUS2Q5JR59 1369 aa12.42□□□□□ -0.42
CDH23-203ENST00000398788 STAG3Q9UJ98 1225 aa12.41□□□□□ -0.42
CDH23-203ENST00000398788 PLEKHD1A6NEE1 506 aa12.4□□□□□ -0.42
CDH23-203ENST00000398788 HSP90AA2PQ14568 343 aaPredicted RBP12.4□□□□□ -0.42
CDH23-203ENST00000398788 KIF27Q86VH2 1401 aa12.4□□□□□ -0.42
CDH23-203ENST00000398788 TMC1Q8TDI8 760 aa12.38□□□□□ -0.43
CDH23-203ENST00000398788 CLIP1P30622 1438 aa12.38□□□□□ -0.43
CDH23-203ENST00000398788 HSP90AA1P07900 732 aaKnown RBP12.38□□□□□ -0.43
CDH23-203ENST00000398788 EEA1Q15075 1411 aa12.38□□□□□ -0.43
CDH23-203ENST00000398788 ZMYND15Q9H091 742 aa12.38□□□□□ -0.43
CDH23-203ENST00000398788 MRS2Q9HD23 443 aa12.37□□□□□ -0.43
CDH23-203ENST00000398788 RGL3Q3MIN7 710 aa12.33□□□□□ -0.43
CDH23-203ENST00000398788 GSE1Q14687 1217 aa12.32□□□□□ -0.44
CDH23-203ENST00000398788 PNNQ9H307 717 aaKnown RBP12.29□□□□□ -0.44
CDH23-203ENST00000398788 PDS5BQ9NTI5 1447 aa12.29□□□□□ -0.44
CDH23-203ENST00000398788 CADPSQ9ULU8 1353 aa12.29□□□□□ -0.44
CDH23-203ENST00000398788 NESP48681 1621 aa12.29□□□□□ -0.44
CDH23-203ENST00000398788 GOLGA3Q08378 1498 aa12.28□□□□□ -0.44
CDH23-203ENST00000398788 AMER1Q5JTC6 1135 aaPredicted RBP12.27□□□□□ -0.45
CDH23-203ENST00000398788 USP35Q9P2H5 1018 aa12.27□□□□□ -0.45
CDH23-203ENST00000398788 CFTRP13569 1480 aa12.27□□□□□ -0.45
CDH23-203ENST00000398788 SIN3AQ96ST3 1273 aa12.26□□□□□ -0.45
CDH23-203ENST00000398788 DDRGK1Q96HY6 314 aa12.25□□□□□ -0.45
CDH23-203ENST00000398788 ARID3AQ99856 593 aa12.25□□□□□ -0.45
CDH23-203ENST00000398788 CARMIL1Q5VZK9 1371 aa12.25□□□□□ -0.45
CDH23-203ENST00000398788 CFDP1Q9UEE9 299 aaPredicted RBP12.25□□□□□ -0.45
CDH23-203ENST00000398788 CUX2O14529 1486 aa12.24□□□□□ -0.45
CDH23-203ENST00000398788 EIF4G2P78344 907 aaKnown RBP eCLIP12.24□□□□□ -0.45
CDH23-203ENST00000398788 CEP162Q5TB80 1403 aa12.24□□□□□ -0.45
CDH23-203ENST00000398788 CCER2I3L3R5 266 aa12.23□□□□□ -0.45
CDH23-203ENST00000398788 WDR43Q15061 677 aaKnown RBP eCLIP12.22□□□□□ -0.45
CDH23-203ENST00000398788 CEP164Q9UPV0 1460 aa12.22□□□□□ -0.45
CDH23-203ENST00000398788 TDRD9Q8NDG6 1382 aaKnown RBP12.21□□□□□ -0.45
CDH23-203ENST00000398788 TNIKQ9UKE5 1360 aa12.21□□□□□ -0.46
CDH23-203ENST00000398788 SLC4A3P48751 1232 aa12.2□□□□□ -0.46
CDH23-203ENST00000398788 FRAT1Q92837 279 aaPredicted RBP12.2□□□□□ -0.46
CDH23-203ENST00000398788 ABCC8Q09428 1581 aa12.2□□□□□ -0.46
CDH23-203ENST00000398788 LAMC3Q9Y6N6 1575 aa12.19□□□□□ -0.46
CDH23-203ENST00000398788 TRIM44Q96DX7 344 aaPredicted RBP12.18□□□□□ -0.46
CDH23-203ENST00000398788 SOGA1O94964 1423 aa12.18□□□□□ -0.46
CDH23-203ENST00000398788 TRHP20396 242 aaPredicted RBP12.17□□□□□ -0.46
CDH23-203ENST00000398788 FANCD2Q9BXW9 1451 aa12.16□□□□□ -0.46
CDH23-203ENST00000398788 PDE4CQ08493 712 aa12.15□□□□□ -0.46
CDH23-203ENST00000398788 ZBTB7CA1YPR0 619 aa12.15□□□□□ -0.46
CDH23-203ENST00000398788 A0A0G2JS52 829 aa12.15□□□□□ -0.46
CDH23-203ENST00000398788 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.15□□□□□ -0.47
CDH23-203ENST00000398788 NEUROD2Q15784 382 aa12.14□□□□□ -0.47
CDH23-203ENST00000398788 UPF2Q9HAU5 1272 aaKnown RBP12.14□□□□□ -0.47
CDH23-203ENST00000398788 FAM43AQ8N2R8 423 aa12.13□□□□□ -0.47
CDH23-203ENST00000398788 PRDM2Q13029 1718 aa12.13□□□□□ -0.47
CDH23-203ENST00000398788 NFKBIBQ15653 356 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms