RNA–Protein interactions for RNA: ENST00000398461.5

MEG3-202, Transcript of maternally expressed 3, humanhuman

TSL 1 (best)

Gene MEG3, Length 3,452 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-202ENST00000398461 ABCA5Q8WWZ7 1642 aa19.59■□□□□ 0.73
MEG3-202ENST00000398461 WDR97A6NE52 1622 aa19.58■□□□□ 0.73
MEG3-202ENST00000398461 FHOD3Q2V2M9 1422 aa19.58■□□□□ 0.72
MEG3-202ENST00000398461 KANK4Q5T7N3 995 aaPredicted RBP19.57■□□□□ 0.72
MEG3-202ENST00000398461 GRIN2BQ13224 1484 aa19.56■□□□□ 0.72
MEG3-202ENST00000398461 ARHGAP35Q9NRY4 1499 aa19.56■□□□□ 0.72
MEG3-202ENST00000398461 EIF4G3O43432 1585 aaKnown RBP19.54■□□□□ 0.72
MEG3-202ENST00000398461 VPS8Q8N3P4 1428 aa19.52■□□□□ 0.72
MEG3-202ENST00000398461 HNRNPUL2Q1KMD3 747 aaKnown RBP19.5■□□□□ 0.71
MEG3-202ENST00000398461 PBRM1Q86U86 1689 aa19.49■□□□□ 0.71
MEG3-202ENST00000398461 ITGAEP38570 1179 aa19.49■□□□□ 0.71
MEG3-202ENST00000398461 FHAD1B1AJZ9 1412 aa19.49■□□□□ 0.71
MEG3-202ENST00000398461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.46■□□□□ 0.71
MEG3-202ENST00000398461 CUL7Q14999 1698 aa19.46■□□□□ 0.7
MEG3-202ENST00000398461 ADAMTS12P58397 1594 aa19.39■□□□□ 0.69
MEG3-202ENST00000398461 JPH4Q96JJ6 628 aa19.37■□□□□ 0.69
MEG3-202ENST00000398461 GRIN2AQ12879 1464 aa19.37■□□□□ 0.69
MEG3-202ENST00000398461 CTTNBP2Q8WZ74 1663 aa19.31■□□□□ 0.68
MEG3-202ENST00000398461 SYNJ2O15056 1496 aa19.31■□□□□ 0.68
MEG3-202ENST00000398461 MAGI1Q96QZ7 1491 aaPredicted RBP19.28■□□□□ 0.68
MEG3-202ENST00000398461 IQGAP2Q13576 1575 aa19.27■□□□□ 0.67
MEG3-202ENST00000398461 FAM50AQ14320 339 aaKnown RBP19.27■□□□□ 0.67
MEG3-202ENST00000398461 CEP170Q5SW79 1584 aa19.24■□□□□ 0.67
MEG3-202ENST00000398461 PCF11O94913 1555 aaKnown RBP19.23■□□□□ 0.67
MEG3-202ENST00000398461 KIAA0586Q9BVV6 1533 aa19.21■□□□□ 0.67
MEG3-202ENST00000398461 CCER1Q8TC90 406 aaPredicted RBP19.2■□□□□ 0.66
MEG3-202ENST00000398461 FMN1Q68DA7 1419 aa19.18■□□□□ 0.66
MEG3-202ENST00000398461 MTUS2Q5JR59 1369 aa19.17■□□□□ 0.66
MEG3-202ENST00000398461 CHD1O14646 1710 aa19.14■□□□□ 0.66
MEG3-202ENST00000398461 PRG4Q92954 1404 aaPredicted RBP19.14■□□□□ 0.65
MEG3-202ENST00000398461 DISP1Q96F81 1524 aa19.13■□□□□ 0.65
MEG3-202ENST00000398461 PLB1Q6P1J6 1458 aa19.13■□□□□ 0.65
MEG3-202ENST00000398461 EFCAB5A4FU69 1503 aa19.13■□□□□ 0.65
MEG3-202ENST00000398461 CDK13Q14004 1512 aaKnown RBP19.12■□□□□ 0.65
MEG3-202ENST00000398461 PHLDB1Q86UU1 1377 aa19.11■□□□□ 0.65
MEG3-202ENST00000398461 CASKIN1Q8WXD9 1431 aa19.1■□□□□ 0.65
MEG3-202ENST00000398461 NUP160Q12769 1436 aa19.1■□□□□ 0.65
MEG3-202ENST00000398461 SAMD9Q5K651 1589 aa19.09■□□□□ 0.65
MEG3-202ENST00000398461 TIAM1Q13009 1591 aa19.08■□□□□ 0.65
MEG3-202ENST00000398461 LRRC9Q6ZRR7 1453 aa19.08■□□□□ 0.64
MEG3-202ENST00000398461 SCAF1Q9H7N4 1312 aaKnown RBP19.07■□□□□ 0.64
MEG3-202ENST00000398461 PELP1Q8IZL8 1130 aaKnown RBP19.07■□□□□ 0.64
MEG3-202ENST00000398461 CARMIL2Q6F5E8 1435 aa19.07■□□□□ 0.64
MEG3-202ENST00000398461 ZNF777Q9ULD5 760 aaPredicted RBP19.06■□□□□ 0.64
MEG3-202ENST00000398461 KCNH8Q96L42 1107 aa19.05■□□□□ 0.64
MEG3-202ENST00000398461 ERCC6L2Q5T890 1561 aa19.05■□□□□ 0.64
MEG3-202ENST00000398461 CHIC2Q9UKJ5 165 aa19.05■□□□□ 0.64
MEG3-202ENST00000398461 FYCO1Q9BQS8 1478 aa19.04■□□□□ 0.64
MEG3-202ENST00000398461 KIAA0556O60303 1618 aa19.03■□□□□ 0.64
MEG3-202ENST00000398461 UGGT2Q9NYU1 1516 aa19.03■□□□□ 0.64
MEG3-202ENST00000398461 PTPRGP23470 1445 aa19.02■□□□□ 0.64
MEG3-202ENST00000398461 OSCARQ8IYS5 282 aa19.02■□□□□ 0.64
MEG3-202ENST00000398461 CCNB3Q8WWL7 1395 aa19.01■□□□□ 0.63
MEG3-202ENST00000398461 LRRIQ1Q96JM4 1722 aa18.99■□□□□ 0.63
MEG3-202ENST00000398461 EPRSP07814 1512 aaKnown RBP18.98■□□□□ 0.63
MEG3-202ENST00000398461 ZNF644Q9H582 1327 aaPredicted RBP18.97■□□□□ 0.63
MEG3-202ENST00000398461 MAGI3Q5TCQ9 1506 aa18.95■□□□□ 0.62
MEG3-202ENST00000398461 NUP153P49790 1475 aaKnown RBP18.95■□□□□ 0.62
MEG3-202ENST00000398461 PLEKHD1A6NEE1 506 aa18.94■□□□□ 0.62
MEG3-202ENST00000398461 CDK11AQ9UQ88 783 aaPredicted RBP18.93■□□□□ 0.62
MEG3-202ENST00000398461 RRP7BPQ9NSQ0 103 aa18.9■□□□□ 0.62
MEG3-202ENST00000398461 NCOA2Q15596 1464 aa18.9■□□□□ 0.62
MEG3-202ENST00000398461 CYB5RLQ6IPT4 315 aa18.87■□□□□ 0.61
MEG3-202ENST00000398461 HECW1Q76N89 1606 aa18.87■□□□□ 0.61
MEG3-202ENST00000398461 RAPGEF6Q8TEU7 1601 aa18.86■□□□□ 0.61
MEG3-202ENST00000398461 CFAP43Q8NDM7 1665 aa18.85■□□□□ 0.61
MEG3-202ENST00000398461 CFDP1Q9UEE9 299 aaPredicted RBP18.84■□□□□ 0.61
MEG3-202ENST00000398461 RRBP1Q9P2E9 1410 aaKnown RBP18.84■□□□□ 0.61
MEG3-202ENST00000398461 ATP10BO94823 1461 aa18.82■□□□□ 0.6
MEG3-202ENST00000398461 FGD6Q6ZV73 1430 aa18.81■□□□□ 0.6
MEG3-202ENST00000398461 CCDC18Q5T9S5 1454 aa18.81■□□□□ 0.6
MEG3-202ENST00000398461 MAP3K1Q13233 1512 aa18.8■□□□□ 0.6
MEG3-202ENST00000398461 YTHDC1Q96MU7 727 aaKnown RBP18.79■□□□□ 0.6
MEG3-202ENST00000398461 UACAQ9BZF9 1416 aa18.79■□□□□ 0.6
MEG3-202ENST00000398461 MYOM3Q5VTT5 1437 aa18.77■□□□□ 0.6
MEG3-202ENST00000398461 HNRNPMP52272 730 aaKnown RBP eCLIP18.75■□□□□ 0.59
MEG3-202ENST00000398461 RAB3GAP2Q9H2M9 1393 aa18.75■□□□□ 0.59
MEG3-202ENST00000398461 PTPRKQ15262 1439 aa18.75■□□□□ 0.59
MEG3-202ENST00000398461 EHBP1L1Q8N3D4 1523 aa18.74■□□□□ 0.59
MEG3-202ENST00000398461 SUPT6HQ7KZ85 1726 aaKnown RBP18.74■□□□□ 0.59
MEG3-202ENST00000398461 NEUROD1Q13562 356 aa18.74■□□□□ 0.59
MEG3-202ENST00000398461 CLASP1Q7Z460 1538 aa18.74■□□□□ 0.59
MEG3-202ENST00000398461 ARHGEF11O15085 1522 aa18.73■□□□□ 0.59
MEG3-202ENST00000398461 TRIM52Q96A61 297 aa18.73■□□□□ 0.59
MEG3-202ENST00000398461 KIF14Q15058 1648 aa18.73■□□□□ 0.59
MEG3-202ENST00000398461 TROQ12816 1431 aaPredicted RBP18.72■□□□□ 0.59
MEG3-202ENST00000398461 ABCA8O94911 1581 aa18.7■□□□□ 0.58
MEG3-202ENST00000398461 NPM1P06748 294 aaKnown RBP eCLIP18.7■□□□□ 0.58
MEG3-202ENST00000398461 GTF3C3Q9Y5Q9 886 aa18.69■□□□□ 0.58
MEG3-202ENST00000398461 MYT1LQ9UL68 1186 aa18.68■□□□□ 0.58
MEG3-202ENST00000398461 SHROOM2Q13796 1616 aa18.67■□□□□ 0.58
MEG3-202ENST00000398461 SIN3AQ96ST3 1273 aa18.66■□□□□ 0.58
MEG3-202ENST00000398461 ZEB1P37275 1124 aaPredicted RBP18.66■□□□□ 0.58
MEG3-202ENST00000398461 FOXD1Q16676 465 aa18.66■□□□□ 0.58
MEG3-202ENST00000398461 PTPN23Q9H3S7 1636 aa18.63■□□□□ 0.57
MEG3-202ENST00000398461 SETD5Q9C0A6 1442 aa18.63■□□□□ 0.57
MEG3-202ENST00000398461 DHX57Q6P158 1386 aaKnown RBP18.61■□□□□ 0.57
MEG3-202ENST00000398461 GPATCH8Q9UKJ3 1502 aaKnown RBP18.61■□□□□ 0.57
MEG3-202ENST00000398461 ABCC2Q92887 1545 aa18.6■□□□□ 0.57
MEG3-202ENST00000398461 TSPY4P0CV99 314 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms