RNA–Protein interactions for RNA: ENST00000397857.5

ITGB2-208, Transcript of integrin subunit beta 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ITGB2, Length 2,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB2-208ENST00000397857 ITGAEP38570 1179 aa21.1■□□□□ 0.97
ITGB2-208ENST00000397857 EIF5BO60841 1220 aaKnown RBP21.1■□□□□ 0.97
ITGB2-208ENST00000397857 ERICH3Q5RHP9 1530 aa21.06■□□□□ 0.96
ITGB2-208ENST00000397857 ARHGAP35Q9NRY4 1499 aa21.05■□□□□ 0.96
ITGB2-208ENST00000397857 DNMBPQ6XZF7 1577 aa21.04■□□□□ 0.96
ITGB2-208ENST00000397857 PDS5BQ9NTI5 1447 aa21.02■□□□□ 0.96
ITGB2-208ENST00000397857 KIF21AQ7Z4S6 1674 aa21■□□□□ 0.95
ITGB2-208ENST00000397857 LAMC3Q9Y6N6 1575 aa20.98■□□□□ 0.95
ITGB2-208ENST00000397857 ARID3CA6NKF2 412 aa20.96■□□□□ 0.95
ITGB2-208ENST00000397857 AQRO60306 1485 aaKnown RBP eCLIP20.95■□□□□ 0.94
ITGB2-208ENST00000397857 ABCA10Q8WWZ4 1543 aa20.94■□□□□ 0.94
ITGB2-208ENST00000397857 FHOD3Q2V2M9 1422 aa20.94■□□□□ 0.94
ITGB2-208ENST00000397857 GAPVD1Q14C86 1478 aa20.86■□□□□ 0.93
ITGB2-208ENST00000397857 UBE2Q2Q8WVN8 375 aa20.83■□□□□ 0.92
ITGB2-208ENST00000397857 ZNF608Q9ULD9 1512 aaPredicted RBP20.81■□□□□ 0.92
ITGB2-208ENST00000397857 FBLN2P98095 1184 aa20.81■□□□□ 0.92
ITGB2-208ENST00000397857 ANO8Q9HCE9 1232 aaPredicted RBP20.79■□□□□ 0.92
ITGB2-208ENST00000397857 FAM50AQ14320 339 aaKnown RBP20.78■□□□□ 0.92
ITGB2-208ENST00000397857 ERCC6Q03468 1493 aa20.76■□□□□ 0.91
ITGB2-208ENST00000397857 MRC2Q9UBG0 1479 aa20.71■□□□□ 0.91
ITGB2-208ENST00000397857 TARBP1Q13395 1621 aaKnown RBP20.69■□□□□ 0.9
ITGB2-208ENST00000397857 PHLDB1Q86UU1 1377 aa20.69■□□□□ 0.9
ITGB2-208ENST00000397857 ABCA5Q8WWZ7 1642 aa20.68■□□□□ 0.9
ITGB2-208ENST00000397857 WDR97A6NE52 1622 aa20.67■□□□□ 0.9
ITGB2-208ENST00000397857 PCF11O94913 1555 aaKnown RBP20.66■□□□□ 0.9
ITGB2-208ENST00000397857 CCNB3Q8WWL7 1395 aa20.65■□□□□ 0.9
ITGB2-208ENST00000397857 CUL7Q14999 1698 aa20.6■□□□□ 0.89
ITGB2-208ENST00000397857 TIAM1Q13009 1591 aa20.6■□□□□ 0.89
ITGB2-208ENST00000397857 LRRC9Q6ZRR7 1453 aa20.6■□□□□ 0.89
ITGB2-208ENST00000397857 PLEKHG5O94827 1062 aa20.59■□□□□ 0.89
ITGB2-208ENST00000397857 FHAD1B1AJZ9 1412 aa20.57■□□□□ 0.88
ITGB2-208ENST00000397857 CHMP7Q8WUX9 453 aaPredicted RBP20.55■□□□□ 0.88
ITGB2-208ENST00000397857 RRBP1Q9P2E9 1410 aaKnown RBP20.54■□□□□ 0.88
ITGB2-208ENST00000397857 CTTNBP2Q8WZ74 1663 aa20.53■□□□□ 0.88
ITGB2-208ENST00000397857 SNAPC4Q5SXM2 1469 aa20.52■□□□□ 0.88
ITGB2-208ENST00000397857 MTUS2Q5JR59 1369 aa20.52■□□□□ 0.87
ITGB2-208ENST00000397857 GRIN2BQ13224 1484 aa20.51■□□□□ 0.87
ITGB2-208ENST00000397857 DHX57Q6P158 1386 aaKnown RBP20.51■□□□□ 0.87
ITGB2-208ENST00000397857 DIEXFQ68CQ4 756 aaKnown RBP20.49■□□□□ 0.87
ITGB2-208ENST00000397857 PBRM1Q86U86 1689 aa20.49■□□□□ 0.87
ITGB2-208ENST00000397857 CASKIN1Q8WXD9 1431 aa20.49■□□□□ 0.87
ITGB2-208ENST00000397857 IFT140Q96RY7 1462 aa20.47■□□□□ 0.87
ITGB2-208ENST00000397857 CHIC2Q9UKJ5 165 aa20.47■□□□□ 0.87
ITGB2-208ENST00000397857 WDR62O43379 1518 aa20.47■□□□□ 0.87
ITGB2-208ENST00000397857 RAB3GAP2Q9H2M9 1393 aa20.46■□□□□ 0.87
ITGB2-208ENST00000397857 TSHZ2Q9NRE2 1034 aa20.46■□□□□ 0.87
ITGB2-208ENST00000397857 FMN1Q68DA7 1419 aa20.45■□□□□ 0.86
ITGB2-208ENST00000397857 SIN3AQ96ST3 1273 aa20.44■□□□□ 0.86
ITGB2-208ENST00000397857 ADAMTS12P58397 1594 aa20.43■□□□□ 0.86
ITGB2-208ENST00000397857 FYCO1Q9BQS8 1478 aa20.42■□□□□ 0.86
ITGB2-208ENST00000397857 EFCAB5A4FU69 1503 aa20.42■□□□□ 0.86
ITGB2-208ENST00000397857 EIF4G3O43432 1585 aaKnown RBP20.41■□□□□ 0.86
ITGB2-208ENST00000397857 ZNF316A6NFI3 1004 aaPredicted RBP20.4■□□□□ 0.86
ITGB2-208ENST00000397857 CDK13Q14004 1512 aaKnown RBP20.4■□□□□ 0.86
ITGB2-208ENST00000397857 LRRIQ1Q96JM4 1722 aa20.38■□□□□ 0.85
ITGB2-208ENST00000397857 PODXL2Q9NZ53 605 aa20.37■□□□□ 0.85
ITGB2-208ENST00000397857 IQGAP2Q13576 1575 aa20.37■□□□□ 0.85
ITGB2-208ENST00000397857 SAMD9Q5K651 1589 aa20.37■□□□□ 0.85
ITGB2-208ENST00000397857 RRP7BPQ9NSQ0 103 aa20.36■□□□□ 0.85
ITGB2-208ENST00000397857 THOC2Q8NI27 1593 aaKnown RBP20.36■□□□□ 0.85
ITGB2-208ENST00000397857 PKNOX2Q96KN3 472 aa20.35■□□□□ 0.85
ITGB2-208ENST00000397857 MAGI3Q5TCQ9 1506 aa20.35■□□□□ 0.85
ITGB2-208ENST00000397857 SALL2Q9Y467 1007 aaPredicted RBP20.34■□□□□ 0.85
ITGB2-208ENST00000397857 PTPRKQ15262 1439 aa20.33■□□□□ 0.85
ITGB2-208ENST00000397857 GRIN2AQ12879 1464 aa20.33■□□□□ 0.85
ITGB2-208ENST00000397857 CFAP43Q8NDM7 1665 aa20.33■□□□□ 0.84
ITGB2-208ENST00000397857 JPH4Q96JJ6 628 aa20.32■□□□□ 0.84
ITGB2-208ENST00000397857 MAP3K1Q13233 1512 aa20.31■□□□□ 0.84
ITGB2-208ENST00000397857 ZNF644Q9H582 1327 aaPredicted RBP20.31■□□□□ 0.84
ITGB2-208ENST00000397857 NCOA2Q15596 1464 aa20.31■□□□□ 0.84
ITGB2-208ENST00000397857 FGD6Q6ZV73 1430 aa20.3■□□□□ 0.84
ITGB2-208ENST00000397857 SETD5Q9C0A6 1442 aa20.3■□□□□ 0.84
ITGB2-208ENST00000397857 YTHDC1Q96MU7 727 aaKnown RBP20.29■□□□□ 0.84
ITGB2-208ENST00000397857 HIRIP3Q9BW71 556 aaPredicted RBP20.28■□□□□ 0.84
ITGB2-208ENST00000397857 DISP1Q96F81 1524 aa20.27■□□□□ 0.83
ITGB2-208ENST00000397857 ZNF777Q9ULD5 760 aaPredicted RBP20.26■□□□□ 0.83
ITGB2-208ENST00000397857 KIAA0586Q9BVV6 1533 aa20.24■□□□□ 0.83
ITGB2-208ENST00000397857 ERICH6BQ5W0A0 696 aa20.24■□□□□ 0.83
ITGB2-208ENST00000397857 EPRSP07814 1512 aaKnown RBP20.24■□□□□ 0.83
ITGB2-208ENST00000397857 PLB1Q6P1J6 1458 aa20.24■□□□□ 0.83
ITGB2-208ENST00000397857 MIER1Q8N108 512 aa20.23■□□□□ 0.83
ITGB2-208ENST00000397857 CEP170Q5SW79 1584 aa20.23■□□□□ 0.83
ITGB2-208ENST00000397857 CCDC136Q96JN2 1154 aa20.22■□□□□ 0.83
ITGB2-208ENST00000397857 CLSPNQ9HAW4 1339 aa20.22■□□□□ 0.83
ITGB2-208ENST00000397857 SYNJ2O15056 1496 aa20.2■□□□□ 0.82
ITGB2-208ENST00000397857 FOXD1Q16676 465 aa20.2■□□□□ 0.82
ITGB2-208ENST00000397857 MYOM3Q5VTT5 1437 aa20.19■□□□□ 0.82
ITGB2-208ENST00000397857 PRG4Q92954 1404 aaPredicted RBP20.18■□□□□ 0.82
ITGB2-208ENST00000397857 TRIM52Q96A61 297 aa20.17■□□□□ 0.82
ITGB2-208ENST00000397857 MAPKBP1O60336 1514 aa20.17■□□□□ 0.82
ITGB2-208ENST00000397857 UGGT2Q9NYU1 1516 aa20.15■□□□□ 0.82
ITGB2-208ENST00000397857 MYT1LQ9UL68 1186 aa20.15■□□□□ 0.82
ITGB2-208ENST00000397857 NUP153P49790 1475 aaKnown RBP20.15■□□□□ 0.82
ITGB2-208ENST00000397857 MAGI1Q96QZ7 1491 aaPredicted RBP20.15■□□□□ 0.82
ITGB2-208ENST00000397857 KIAA0556O60303 1618 aa20.15■□□□□ 0.82
ITGB2-208ENST00000397857 SUPT16HQ9Y5B9 1047 aaKnown RBP20.1■□□□□ 0.81
ITGB2-208ENST00000397857 HECW1Q76N89 1606 aa20.1■□□□□ 0.81
ITGB2-208ENST00000397857 EHBP1L1Q8N3D4 1523 aa20.09■□□□□ 0.81
ITGB2-208ENST00000397857 SUPT6HQ7KZ85 1726 aaKnown RBP20.08■□□□□ 0.81
ITGB2-208ENST00000397857 CCDC18Q5T9S5 1454 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms