RNA–Protein interactions for RNA: ENST00000397778.6

PQLC1-203, Transcript of PQ loop repeat containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PQLC1, Length 2,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PQLC1-203ENST00000397778 YTHDC1Q96MU7 727 aaKnown RBP38.16■■■■□ 3.7
PQLC1-203ENST00000397778 CLSPNQ9HAW4 1339 aa38.14■■■■□ 3.7
PQLC1-203ENST00000397778 CENPBP07199 599 aaPredicted RBP38.14■■■■□ 3.7
PQLC1-203ENST00000397778 FHOD3Q2V2M9 1422 aa38.11■■■■□ 3.69
PQLC1-203ENST00000397778 LRRC9Q6ZRR7 1453 aa38.1■■■■□ 3.69
PQLC1-203ENST00000397778 PHLDB1Q86UU1 1377 aa38.1■■■■□ 3.69
PQLC1-203ENST00000397778 GTF3C3Q9Y5Q9 886 aa38.08■■■■□ 3.69
PQLC1-203ENST00000397778 URB2Q14146 1524 aaKnown RBP38.07■■■■□ 3.68
PQLC1-203ENST00000397778 TDRD9Q8NDG6 1382 aaKnown RBP38.04■■■■□ 3.68
PQLC1-203ENST00000397778 MAP3K1Q13233 1512 aa38.04■■■■□ 3.68
PQLC1-203ENST00000397778 PCF11O94913 1555 aaKnown RBP38.01■■■■□ 3.68
PQLC1-203ENST00000397778 RAB3GAP2Q9H2M9 1393 aa38.01■■■■□ 3.67
PQLC1-203ENST00000397778 FHAD1B1AJZ9 1412 aa38■■■■□ 3.67
PQLC1-203ENST00000397778 FAM50AQ14320 339 aaKnown RBP38■■■■□ 3.67
PQLC1-203ENST00000397778 LAMC3Q9Y6N6 1575 aa37.91■■■■□ 3.66
PQLC1-203ENST00000397778 CUL7Q14999 1698 aa37.83■■■■□ 3.65
PQLC1-203ENST00000397778 CFAP43Q8NDM7 1665 aa37.81■■■■□ 3.64
PQLC1-203ENST00000397778 SETD5Q9C0A6 1442 aa37.8■■■■□ 3.64
PQLC1-203ENST00000397778 CASKIN1Q8WXD9 1431 aa37.79■■■■□ 3.64
PQLC1-203ENST00000397778 MAPKBP1O60336 1514 aa37.78■■■■□ 3.64
PQLC1-203ENST00000397778 WDR97A6NE52 1622 aa37.77■■■■□ 3.64
PQLC1-203ENST00000397778 GAPVD1Q14C86 1478 aa37.76■■■■□ 3.64
PQLC1-203ENST00000397778 PDS5BQ9NTI5 1447 aa37.75■■■■□ 3.63
PQLC1-203ENST00000397778 EFCAB5A4FU69 1503 aa37.75■■■■□ 3.63
PQLC1-203ENST00000397778 FYCO1Q9BQS8 1478 aa37.75■■■■□ 3.63
PQLC1-203ENST00000397778 CTTNBP2Q8WZ74 1663 aa37.75■■■■□ 3.63
PQLC1-203ENST00000397778 SIN3AQ96ST3 1273 aa37.72■■■■□ 3.63
PQLC1-203ENST00000397778 ABCA5Q8WWZ7 1642 aa37.7■■■■□ 3.63
PQLC1-203ENST00000397778 KIF21AQ7Z4S6 1674 aa37.67■■■■□ 3.62
PQLC1-203ENST00000397778 AQRO60306 1485 aaKnown RBP eCLIP37.65■■■■□ 3.626e-6■■■■□ 23.2
PQLC1-203ENST00000397778 SNAPC4Q5SXM2 1469 aa37.63■■■■□ 3.61
PQLC1-203ENST00000397778 FMN1Q68DA7 1419 aa37.63■■■■□ 3.61
PQLC1-203ENST00000397778 MTUS2Q5JR59 1369 aa37.53■■■■□ 3.6
PQLC1-203ENST00000397778 TARBP1Q13395 1621 aaKnown RBP37.49■■■■□ 3.59
PQLC1-203ENST00000397778 SAMD9Q5K651 1589 aa37.49■■■■□ 3.59
PQLC1-203ENST00000397778 FGD6Q6ZV73 1430 aa37.49■■■■□ 3.59
PQLC1-203ENST00000397778 LRRIQ1Q96JM4 1722 aa37.48■■■■□ 3.59
PQLC1-203ENST00000397778 PTPRKQ15262 1439 aa37.44■■■■□ 3.58
PQLC1-203ENST00000397778 GRIN2BQ13224 1484 aa37.41■■■■□ 3.58
PQLC1-203ENST00000397778 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.41■■■■□ 3.587e-7■■■■□ 22.8
PQLC1-203ENST00000397778 NCOA2Q15596 1464 aa37.34■■■■□ 3.57
PQLC1-203ENST00000397778 ARID3CA6NKF2 412 aa37.32■■■■□ 3.57
PQLC1-203ENST00000397778 HIRIP3Q9BW71 556 aaPredicted RBP37.3■■■■□ 3.56
PQLC1-203ENST00000397778 KCNH8Q96L42 1107 aa37.27■■■■□ 3.56
PQLC1-203ENST00000397778 MAGI3Q5TCQ9 1506 aa37.27■■■■□ 3.56
PQLC1-203ENST00000397778 MYOM3Q5VTT5 1437 aa37.25■■■■□ 3.55
PQLC1-203ENST00000397778 PELP1Q8IZL8 1130 aaKnown RBP37.24■■■■□ 3.55
PQLC1-203ENST00000397778 PPP1R15AO75807 674 aaPredicted RBP37.22■■■■□ 3.55
PQLC1-203ENST00000397778 PBRM1Q86U86 1689 aa37.21■■■■□ 3.55
PQLC1-203ENST00000397778 CCDC18Q5T9S5 1454 aa37.2■■■■□ 3.55
PQLC1-203ENST00000397778 DDX10Q13206 875 aaKnown RBP37.2■■■■□ 3.54
PQLC1-203ENST00000397778 ZNF608Q9ULD9 1512 aaPredicted RBP37.19■■■■□ 3.54
PQLC1-203ENST00000397778 MRC2Q9UBG0 1479 aa37.18■■■■□ 3.54
PQLC1-203ENST00000397778 CHIC2Q9UKJ5 165 aa37.17■■■■□ 3.54
PQLC1-203ENST00000397778 HFM1A2PYH4 1435 aa37.17■■■■□ 3.54
PQLC1-203ENST00000397778 NAIPQ13075 1403 aa37.14■■■■□ 3.54
PQLC1-203ENST00000397778 RRP7BPQ9NSQ0 103 aa37.14■■■■□ 3.54
PQLC1-203ENST00000397778 SUPT6HQ7KZ85 1726 aaKnown RBP37.13■■■■□ 3.53
PQLC1-203ENST00000397778 ADAMTS12P58397 1594 aa37.11■■■■□ 3.53
PQLC1-203ENST00000397778 IQGAP2Q13576 1575 aa37.11■■■■□ 3.53
PQLC1-203ENST00000397778 EHBP1L1Q8N3D4 1523 aa37.11■■■■□ 3.53
PQLC1-203ENST00000397778 TIMELESSQ9UNS1 1208 aa37.11■■■■□ 3.53
PQLC1-203ENST00000397778 PTPN23Q9H3S7 1636 aa37.11■■■■□ 3.53
PQLC1-203ENST00000397778 THOC2Q8NI27 1593 aaKnown RBP37.1■■■■□ 3.53
PQLC1-203ENST00000397778 UGGT2Q9NYU1 1516 aa37.1■■■■□ 3.53
PQLC1-203ENST00000397778 CDK13Q14004 1512 aaKnown RBP37.07■■■■□ 3.53
PQLC1-203ENST00000397778 UACAQ9BZF9 1416 aa37.06■■■■□ 3.52
PQLC1-203ENST00000397778 ARHGEF11O15085 1522 aa37.05■■■■□ 3.52
PQLC1-203ENST00000397778 EPRSP07814 1512 aaKnown RBP37.04■■■■□ 3.52
PQLC1-203ENST00000397778 TONSLQ96HA7 1378 aa36.99■■■■□ 3.51
PQLC1-203ENST00000397778 HECW1Q76N89 1606 aa36.95■■■■□ 3.51
PQLC1-203ENST00000397778 IFT140Q96RY7 1462 aa36.92■■■■□ 3.5
PQLC1-203ENST00000397778 WDR62O43379 1518 aa36.9■■■■□ 3.5
PQLC1-203ENST00000397778 TRIM52Q96A61 297 aa36.87■■■■□ 3.49
PQLC1-203ENST00000397778 TCOF1Q13428 1488 aaKnown RBP36.87■■■■□ 3.49
PQLC1-203ENST00000397778 KDM6BO15054 1643 aa36.85■■■■□ 3.49
PQLC1-203ENST00000397778 DISP1Q96F81 1524 aa36.84■■■■□ 3.49
PQLC1-203ENST00000397778 DENND4BO75064 1496 aaPredicted RBP36.82■■■■□ 3.49
PQLC1-203ENST00000397778 ZNF644Q9H582 1327 aaPredicted RBP36.82■■■■□ 3.48
PQLC1-203ENST00000397778 KIAA0586Q9BVV6 1533 aa36.8■■■■□ 3.48
PQLC1-203ENST00000397778 FOXD1Q16676 465 aa36.79■■■■□ 3.48
PQLC1-203ENST00000397778 SUPT16HQ9Y5B9 1047 aaKnown RBP36.75■■■■□ 3.47
PQLC1-203ENST00000397778 KDM5BQ9UGL1 1544 aa36.74■■■■□ 3.47
PQLC1-203ENST00000397778 GRIN2AQ12879 1464 aa36.74■■■■□ 3.47
PQLC1-203ENST00000397778 MIA2Q96PC5 1412 aa36.73■■■■□ 3.47
PQLC1-203ENST00000397778 FBLN2P98095 1184 aa36.73■■■■□ 3.47
PQLC1-203ENST00000397778 KIAA0556O60303 1618 aa36.72■■■■□ 3.47
PQLC1-203ENST00000397778 NUP153P49790 1475 aaKnown RBP36.72■■■■□ 3.47
PQLC1-203ENST00000397778 EIF4G3O43432 1585 aaKnown RBP36.71■■■■□ 3.47
PQLC1-203ENST00000397778 MPHOSPH9Q99550 1183 aa36.71■■■■□ 3.47
PQLC1-203ENST00000397778 CHMP7Q8WUX9 453 aaPredicted RBP36.68■■■■□ 3.46
PQLC1-203ENST00000397778 ERCC6Q03468 1493 aa36.67■■■■□ 3.46
PQLC1-203ENST00000397778 GCC2Q8IWJ2 1684 aa36.64■■■■□ 3.46
PQLC1-203ENST00000397778 ANP32CO43423 234 aa36.6■■■■□ 3.45
PQLC1-203ENST00000397778 PRG4Q92954 1404 aaPredicted RBP36.59■■■■□ 3.45
PQLC1-203ENST00000397778 ABCC5O15440 1437 aa36.59■■■■□ 3.45
PQLC1-203ENST00000397778 DAPK1P53355 1430 aa36.58■■■■□ 3.45
PQLC1-203ENST00000397778 AKNAQ7Z591 1439 aa36.58■■■■□ 3.45
PQLC1-203ENST00000397778 RAPGEF6Q8TEU7 1601 aa36.56■■■■□ 3.44
PQLC1-203ENST00000397778 PLB1Q6P1J6 1458 aa36.56■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms