RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 EFCAB5A4FU69 1503 aa30.17■■■□□ 2.42
TSPAN4-204ENST00000397404 KIAA0586Q9BVV6 1533 aa30.14■■■□□ 2.42
TSPAN4-204ENST00000397404 NUP160Q12769 1436 aa30.12■■■□□ 2.41
TSPAN4-204ENST00000397404 IQGAP2Q13576 1575 aa30.12■■■□□ 2.41
TSPAN4-204ENST00000397404 ARHGAP35Q9NRY4 1499 aa30.04■■■□□ 2.4
TSPAN4-204ENST00000397404 FBLN2P98095 1184 aa30.03■■■□□ 2.4
TSPAN4-204ENST00000397404 VPS8Q8N3P4 1428 aa30.01■■■□□ 2.39
TSPAN4-204ENST00000397404 UGGT2Q9NYU1 1516 aa30.01■■■□□ 2.39
TSPAN4-204ENST00000397404 CEP170Q5SW79 1584 aa30.01■■■□□ 2.39
TSPAN4-204ENST00000397404 SAMD9Q5K651 1589 aa29.98■■■□□ 2.39
TSPAN4-204ENST00000397404 CHD1O14646 1710 aa29.98■■■□□ 2.39
TSPAN4-204ENST00000397404 ARAP1Q96P48 1450 aa29.95■■■□□ 2.38
TSPAN4-204ENST00000397404 RANGAP1P46060 587 aaPredicted RBP29.88■■■□□ 2.37
TSPAN4-204ENST00000397404 FMN1Q68DA7 1419 aa29.88■■■□□ 2.37
TSPAN4-204ENST00000397404 CARMIL2Q6F5E8 1435 aa29.83■■■□□ 2.37
TSPAN4-204ENST00000397404 JPH4Q96JJ6 628 aa29.8■■■□□ 2.36
TSPAN4-204ENST00000397404 KIAA0556O60303 1618 aa29.78■■■□□ 2.36
TSPAN4-204ENST00000397404 FHOD3Q2V2M9 1422 aa29.76■■■□□ 2.35
TSPAN4-204ENST00000397404 SHROOM2Q13796 1616 aa29.75■■■□□ 2.35
TSPAN4-204ENST00000397404 CLASP1Q7Z460 1538 aa29.75■■■□□ 2.35
TSPAN4-204ENST00000397404 DISP1Q96F81 1524 aa29.75■■■□□ 2.35
TSPAN4-204ENST00000397404 APLP2Q06481 763 aa29.74■■■□□ 2.35
TSPAN4-204ENST00000397404 FYCO1Q9BQS8 1478 aa29.72■■■□□ 2.35
TSPAN4-204ENST00000397404 MAP3K1Q13233 1512 aa29.7■■■□□ 2.35
TSPAN4-204ENST00000397404 CASKIN1Q8WXD9 1431 aa29.7■■■□□ 2.34
TSPAN4-204ENST00000397404 P3H3Q8IVL6 736 aa29.65■■■□□ 2.34
TSPAN4-204ENST00000397404 OSCARQ8IYS5 282 aa29.64■■■□□ 2.34
TSPAN4-204ENST00000397404 PRG4Q92954 1404 aaPredicted RBP29.61■■■□□ 2.33
TSPAN4-204ENST00000397404 PCF11O94913 1555 aaKnown RBP29.59■■■□□ 2.33
TSPAN4-204ENST00000397404 HECW1Q76N89 1606 aa29.54■■■□□ 2.32
TSPAN4-204ENST00000397404 CCDC18Q5T9S5 1454 aa29.53■■■□□ 2.32
TSPAN4-204ENST00000397404 TIAM1Q13009 1591 aa29.49■■■□□ 2.31
TSPAN4-204ENST00000397404 CFAP43Q8NDM7 1665 aa29.48■■■□□ 2.31
TSPAN4-204ENST00000397404 RAPGEF6Q8TEU7 1601 aa29.46■■■□□ 2.31
TSPAN4-204ENST00000397404 PTPRGP23470 1445 aa29.45■■■□□ 2.31
TSPAN4-204ENST00000397404 ABCA8O94911 1581 aa29.38■■■□□ 2.29
TSPAN4-204ENST00000397404 TRIM26Q12899 539 aaPredicted RBP29.38■■■□□ 2.29
TSPAN4-204ENST00000397404 LRRC9Q6ZRR7 1453 aa29.36■■■□□ 2.29
TSPAN4-204ENST00000397404 EPRSP07814 1512 aaKnown RBP29.36■■■□□ 2.29
TSPAN4-204ENST00000397404 ATP1B4Q9UN42 357 aaPredicted RBP29.36■■■□□ 2.29
TSPAN4-204ENST00000397404 NUP153P49790 1475 aaKnown RBP29.33■■■□□ 2.29
TSPAN4-204ENST00000397404 UACAQ9BZF9 1416 aa29.31■■■□□ 2.28
TSPAN4-204ENST00000397404 CDK11AQ9UQ88 783 aaPredicted RBP29.31■■■□□ 2.28
TSPAN4-204ENST00000397404 PLB1Q6P1J6 1458 aa29.31■■■□□ 2.28
TSPAN4-204ENST00000397404 ERCC6L2Q5T890 1561 aa29.28■■■□□ 2.28
TSPAN4-204ENST00000397404 UHRF1BP1LA0JNW5 1464 aa29.28■■■□□ 2.28
TSPAN4-204ENST00000397404 EHBP1L1Q8N3D4 1523 aa29.27■■■□□ 2.28
TSPAN4-204ENST00000397404 LRRIQ1Q96JM4 1722 aa29.27■■■□□ 2.28
TSPAN4-204ENST00000397404 MTUS2Q5JR59 1369 aa29.25■■■□□ 2.27
TSPAN4-204ENST00000397404 ABCC2Q92887 1545 aa29.24■■■□□ 2.27
TSPAN4-204ENST00000397404 KANK4Q5T7N3 995 aaPredicted RBP29.23■■■□□ 2.27
TSPAN4-204ENST00000397404 TTBK1Q5TCY1 1321 aaPredicted RBP29.2■■■□□ 2.26
TSPAN4-204ENST00000397404 PPARGC1BQ86YN6 1023 aaKnown RBP29.18■■■□□ 2.26
TSPAN4-204ENST00000397404 CDK13Q14004 1512 aaKnown RBP29.16■■■□□ 2.26
TSPAN4-204ENST00000397404 SUPT6HQ7KZ85 1726 aaKnown RBP29.15■■■□□ 2.26
TSPAN4-204ENST00000397404 ATP10BO94823 1461 aa29.13■■■□□ 2.25
TSPAN4-204ENST00000397404 TROQ12816 1431 aaPredicted RBP29.1■■■□□ 2.25
TSPAN4-204ENST00000397404 ARHGEF11O15085 1522 aa29.09■■■□□ 2.25
TSPAN4-204ENST00000397404 KDM5BQ9UGL1 1544 aa29.09■■■□□ 2.25
TSPAN4-204ENST00000397404 RRBP1Q9P2E9 1410 aaKnown RBP29.07■■■□□ 2.24
TSPAN4-204ENST00000397404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.07■■■□□ 2.24
TSPAN4-204ENST00000397404 HNRNPUL2Q1KMD3 747 aaKnown RBP29.07■■■□□ 2.24
TSPAN4-204ENST00000397404 PLEKHD1A6NEE1 506 aa29.06■■■□□ 2.24
TSPAN4-204ENST00000397404 MAGI3Q5TCQ9 1506 aa29.05■■■□□ 2.24
TSPAN4-204ENST00000397404 PCGF6Q9BYE7 350 aa29.04■■■□□ 2.24
TSPAN4-204ENST00000397404 NCOA2Q15596 1464 aa29.04■■■□□ 2.24
TSPAN4-204ENST00000397404 ADCY10Q96PN6 1610 aa29.03■■■□□ 2.24
TSPAN4-204ENST00000397404 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29■■■□□ 2.234e-6■■■■■ 46.2
TSPAN4-204ENST00000397404 CCNB3Q8WWL7 1395 aa28.97■■■□□ 2.23
TSPAN4-204ENST00000397404 ZCCHC11Q5TAX3 1644 aaKnown RBP28.96■■■□□ 2.23
TSPAN4-204ENST00000397404 PHLDB1Q86UU1 1377 aa28.96■■■□□ 2.23
TSPAN4-204ENST00000397404 MYOM3Q5VTT5 1437 aa28.96■■■□□ 2.23
TSPAN4-204ENST00000397404 KIF14Q15058 1648 aa28.95■■■□□ 2.23
TSPAN4-204ENST00000397404 MIA2Q96PC5 1412 aa28.93■■■□□ 2.22
TSPAN4-204ENST00000397404 RIMBP3CA6NJZ7 1639 aa28.93■■■□□ 2.22
TSPAN4-204ENST00000397404 RIMBP3BA6NNM3 1639 aa28.93■■■□□ 2.22
TSPAN4-204ENST00000397404 RIMBP3Q9UFD9 1639 aa28.93■■■□□ 2.22
TSPAN4-204ENST00000397404 ARID3CA6NKF2 412 aa28.92■■■□□ 2.22
TSPAN4-204ENST00000397404 FGD6Q6ZV73 1430 aa28.89■■■□□ 2.22
TSPAN4-204ENST00000397404 NPM1P06748 294 aaKnown RBP eCLIP28.89■■■□□ 2.22
TSPAN4-204ENST00000397404 ITSN2Q9NZM3 1697 aa28.87■■■□□ 2.21
TSPAN4-204ENST00000397404 ABCC10Q5T3U5 1492 aa28.8■■■□□ 2.2
TSPAN4-204ENST00000397404 TCOF1Q13428 1488 aaKnown RBP28.8■■■□□ 2.2
TSPAN4-204ENST00000397404 WDR7Q9Y4E6 1490 aa28.8■■■□□ 2.2
TSPAN4-204ENST00000397404 PTPN23Q9H3S7 1636 aa28.75■■■□□ 2.19
TSPAN4-204ENST00000397404 GPATCH8Q9UKJ3 1502 aaKnown RBP28.75■■■□□ 2.19
TSPAN4-204ENST00000397404 MAPKBP1O60336 1514 aa28.71■■■□□ 2.19
TSPAN4-204ENST00000397404 ASXL2Q76L83 1435 aa28.71■■■□□ 2.19
TSPAN4-204ENST00000397404 CYB5RLQ6IPT4 315 aa28.7■■■□□ 2.18
TSPAN4-204ENST00000397404 ARAP3Q8WWN8 1544 aa28.69■■■□□ 2.18
TSPAN4-204ENST00000397404 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.68■■■□□ 2.18
TSPAN4-204ENST00000397404 FAM50AQ14320 339 aaKnown RBP28.68■■■□□ 2.18
TSPAN4-204ENST00000397404 CFDP1Q9UEE9 299 aaPredicted RBP28.68■■■□□ 2.18
TSPAN4-204ENST00000397404 CDC42BPAQ5VT25 1732 aa28.67■■■□□ 2.18
TSPAN4-204ENST00000397404 PREX2Q70Z35 1606 aa28.66■■■□□ 2.18
TSPAN4-204ENST00000397404 MYO5CQ9NQX4 1742 aa28.64■■■□□ 2.17
TSPAN4-204ENST00000397404 ABCA9Q8IUA7 1624 aa28.62■■■□□ 2.17
TSPAN4-204ENST00000397404 TTC37Q6PGP7 1564 aa28.61■■■□□ 2.17
TSPAN4-204ENST00000397404 PLCH2O75038 1416 aa28.6■■■□□ 2.17
TSPAN4-204ENST00000397404 PLEKHH2Q8IVE3 1493 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms