RNA–Protein interactions for RNA: ENST00000397381.4

UCA1-201, Transcript of urothelial cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene UCA1, Length 2,299 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-201ENST00000397381 FKBP8Q14318 412 aa13.23□□□□□ -0.29
UCA1-201ENST00000397381 CCER2I3L3R5 266 aa13.22□□□□□ -0.29
UCA1-201ENST00000397381 NEFLP07196 543 aa13.22□□□□□ -0.29
UCA1-201ENST00000397381 ITGAEP38570 1179 aa13.22□□□□□ -0.29
UCA1-201ENST00000397381 PPP1R15AO75807 674 aaPredicted RBP13.2□□□□□ -0.3
UCA1-201ENST00000397381 LRRC9Q6ZRR7 1453 aa13.2□□□□□ -0.3
UCA1-201ENST00000397381 NCAPD3P42695 1498 aa13.2□□□□□ -0.3
UCA1-201ENST00000397381 DDX10Q13206 875 aaKnown RBP13.19□□□□□ -0.3
UCA1-201ENST00000397381 FOXD1Q16676 465 aa13.19□□□□□ -0.3
UCA1-201ENST00000397381 CFAP43Q8NDM7 1665 aa13.18□□□□□ -0.3
UCA1-201ENST00000397381 BCANQ96GW7 911 aa13.18□□□□□ -0.3
UCA1-201ENST00000397381 CFTRP13569 1480 aa13.18□□□□□ -0.3
UCA1-201ENST00000397381 PRDM2Q13029 1718 aa13.16□□□□□ -0.3
UCA1-201ENST00000397381 FHAD1B1AJZ9 1412 aa13.15□□□□□ -0.3
UCA1-201ENST00000397381 PHLDB1Q86UU1 1377 aa13.14□□□□□ -0.31
UCA1-201ENST00000397381 ANP32CO43423 234 aa13.14□□□□□ -0.31
UCA1-201ENST00000397381 RBM19Q9Y4C8 960 aaKnown RBP13.14□□□□□ -0.31
UCA1-201ENST00000397381 IGF1RP08069 1367 aa13.13□□□□□ -0.31
UCA1-201ENST00000397381 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.13□□□□□ -0.31
UCA1-201ENST00000397381 SIN3AQ96ST3 1273 aa13.13□□□□□ -0.31
UCA1-201ENST00000397381 BCL11AQ9H165 835 aa13.12□□□□□ -0.31
UCA1-201ENST00000397381 FAM50AQ14320 339 aaKnown RBP13.09□□□□□ -0.31
UCA1-201ENST00000397381 CARMIL1Q5VZK9 1371 aa13.09□□□□□ -0.31
UCA1-201ENST00000397381 PCF11O94913 1555 aaKnown RBP13.09□□□□□ -0.31
UCA1-201ENST00000397381 FYCO1Q9BQS8 1478 aa13.06□□□□□ -0.32
UCA1-201ENST00000397381 AQRO60306 1485 aaKnown RBP eCLIP13.05□□□□□ -0.323e-7■■■■□ 20
UCA1-201ENST00000397381 TRIM52Q96A61 297 aa13.05□□□□□ -0.32
UCA1-201ENST00000397381 EFCAB5A4FU69 1503 aa13.04□□□□□ -0.32
UCA1-201ENST00000397381 TONSLQ96HA7 1378 aa13.03□□□□□ -0.32
UCA1-201ENST00000397381 FGD5Q6ZNL6 1462 aa13.03□□□□□ -0.32
UCA1-201ENST00000397381 FANCIQ9NVI1 1328 aa13.02□□□□□ -0.33
UCA1-201ENST00000397381 CASKIN1Q8WXD9 1431 aa13.02□□□□□ -0.33
UCA1-201ENST00000397381 UACAQ9BZF9 1416 aa13□□□□□ -0.33
UCA1-201ENST00000397381 ERICH6BQ5W0A0 696 aa13□□□□□ -0.33
UCA1-201ENST00000397381 CCDC18Q5T9S5 1454 aa12.99□□□□□ -0.33
UCA1-201ENST00000397381 HIRIP3Q9BW71 556 aaPredicted RBP12.99□□□□□ -0.33
UCA1-201ENST00000397381 FGD6Q6ZV73 1430 aa12.98□□□□□ -0.33
UCA1-201ENST00000397381 HFM1A2PYH4 1435 aa12.98□□□□□ -0.33
UCA1-201ENST00000397381 CDK11AQ9UQ88 783 aaPredicted RBP12.97□□□□□ -0.33
UCA1-201ENST00000397381 PTPN23Q9H3S7 1636 aa12.97□□□□□ -0.33
UCA1-201ENST00000397381 FHOD3Q2V2M9 1422 aa12.95□□□□□ -0.34
UCA1-201ENST00000397381 MSH5O43196 834 aa12.95□□□□□ -0.34
UCA1-201ENST00000397381 CADPSQ9ULU8 1353 aa12.95□□□□□ -0.34
UCA1-201ENST00000397381 CTTNBP2Q8WZ74 1663 aa12.93□□□□□ -0.34
UCA1-201ENST00000397381 CC2D2AQ9P2K1 1620 aa12.93□□□□□ -0.34
UCA1-201ENST00000397381 FMN1Q68DA7 1419 aa12.93□□□□□ -0.34
UCA1-201ENST00000397381 HNRNPUQ00839 825 aaKnown RBP eCLIP12.93□□□□□ -0.34
UCA1-201ENST00000397381 ATP1B4Q9UN42 357 aaPredicted RBP12.92□□□□□ -0.34
UCA1-201ENST00000397381 KDM5BQ9UGL1 1544 aa12.92□□□□□ -0.34
UCA1-201ENST00000397381 CUL7Q14999 1698 aa12.92□□□□□ -0.34
UCA1-201ENST00000397381 P3H3Q8IVL6 736 aa12.92□□□□□ -0.34
UCA1-201ENST00000397381 MYT1LQ9UL68 1186 aa12.92□□□□□ -0.34
UCA1-201ENST00000397381 ERICH6Q7L0X2 663 aa12.91□□□□□ -0.34
UCA1-201ENST00000397381 NAIPQ13075 1403 aa12.9□□□□□ -0.34
UCA1-201ENST00000397381 SNAPC4Q5SXM2 1469 aa12.9□□□□□ -0.35
UCA1-201ENST00000397381 NCOA2Q15596 1464 aa12.89□□□□□ -0.35
UCA1-201ENST00000397381 PPP4R2Q9NY27 417 aa12.89□□□□□ -0.35
UCA1-201ENST00000397381 PTPRKQ15262 1439 aa12.89□□□□□ -0.35
UCA1-201ENST00000397381 ABCA10Q8WWZ4 1543 aa12.89□□□□□ -0.35
UCA1-201ENST00000397381 MTUS2Q5JR59 1369 aa12.88□□□□□ -0.35
UCA1-201ENST00000397381 THOC2Q8NI27 1593 aaKnown RBP12.88□□□□□ -0.35
UCA1-201ENST00000397381 MYOM3Q5VTT5 1437 aa12.87□□□□□ -0.35
UCA1-201ENST00000397381 DNMBPQ6XZF7 1577 aa12.87□□□□□ -0.35
UCA1-201ENST00000397381 SUPT6HQ7KZ85 1726 aaKnown RBP12.86□□□□□ -0.35
UCA1-201ENST00000397381 CNTLNQ9NXG0 1405 aa12.86□□□□□ -0.35
UCA1-201ENST00000397381 HECW1Q76N89 1606 aa12.85□□□□□ -0.35
UCA1-201ENST00000397381 WASHC2AQ641Q2 1341 aa12.85□□□□□ -0.35
UCA1-201ENST00000397381 EHBP1L1Q8N3D4 1523 aa12.84□□□□□ -0.35
UCA1-201ENST00000397381 GCC2Q8IWJ2 1684 aa12.84□□□□□ -0.35
UCA1-201ENST00000397381 HSPA5P11021 654 aaKnown RBP12.84□□□□□ -0.35
UCA1-201ENST00000397381 PLPPR3Q6T4P5 718 aa12.84□□□□□ -0.35
UCA1-201ENST00000397381 SAMD9Q5K651 1589 aa12.84□□□□□ -0.35
UCA1-201ENST00000397381 IRX6P78412 446 aaPredicted RBP12.83□□□□□ -0.36
UCA1-201ENST00000397381 FANCD2Q9BXW9 1451 aa12.82□□□□□ -0.36
UCA1-201ENST00000397381 AKNAQ7Z591 1439 aa12.82□□□□□ -0.36
UCA1-201ENST00000397381 LRRIQ1Q96JM4 1722 aa12.82□□□□□ -0.36
UCA1-201ENST00000397381 GRIN2BQ13224 1484 aa12.82□□□□□ -0.36
UCA1-201ENST00000397381 EIF4G2P78344 907 aaKnown RBP eCLIP12.82□□□□□ -0.36
UCA1-201ENST00000397381 KIF21AQ7Z4S6 1674 aa12.81□□□□□ -0.36
UCA1-201ENST00000397381 ARHGEF11O15085 1522 aa12.8□□□□□ -0.36
UCA1-201ENST00000397381 UGGT2Q9NYU1 1516 aa12.8□□□□□ -0.36
UCA1-201ENST00000397381 TCOF1Q13428 1488 aaKnown RBP12.8□□□□□ -0.36
UCA1-201ENST00000397381 ZBED9Q6R2W3 1325 aa12.8□□□□□ -0.36
UCA1-201ENST00000397381 POLA1P09884 1462 aaPredicted RBP12.79□□□□□ -0.36
UCA1-201ENST00000397381 RAD54L2Q9Y4B4 1467 aa12.79□□□□□ -0.36
UCA1-201ENST00000397381 TOPBP1Q92547 1522 aa12.79□□□□□ -0.36
UCA1-201ENST00000397381 NCOA1Q15788 1441 aa12.79□□□□□ -0.36
UCA1-201ENST00000397381 CCDC7Q96M83 1385 aa12.77□□□□□ -0.36
UCA1-201ENST00000397381 DENND4BO75064 1496 aaPredicted RBP12.77□□□□□ -0.37
UCA1-201ENST00000397381 POLR1AO95602 1720 aaPredicted RBP12.76□□□□□ -0.37
UCA1-201ENST00000397381 PRKRIP1Q9H875 184 aaPredicted RBP12.76□□□□□ -0.37
UCA1-201ENST00000397381 ABCA5Q8WWZ7 1642 aa12.76□□□□□ -0.37
UCA1-201ENST00000397381 MRS2Q9HD23 443 aa12.73□□□□□ -0.37
UCA1-201ENST00000397381 CCDC184Q52MB2 194 aa12.73□□□□□ -0.37
UCA1-201ENST00000397381 MIA2Q96PC5 1412 aa12.71□□□□□ -0.37
UCA1-201ENST00000397381 B4GALNT3Q6L9W6 998 aa12.71□□□□□ -0.37
UCA1-201ENST00000397381 FAM9BQ8IZU0 186 aa12.71□□□□□ -0.37
UCA1-201ENST00000397381 SMG6Q86US8 1419 aaKnown RBP12.71□□□□□ -0.38
UCA1-201ENST00000397381 L3MBTL2Q969R5 705 aa12.71□□□□□ -0.38
UCA1-201ENST00000397381 RRP7BPQ9NSQ0 103 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms