RNA–Protein interactions for RNA: ENST00000397289.6

APOL3-204, Transcript of apolipoprotein L3, humanhuman

TSL 1 (best)

Gene APOL3, Length 2,214 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOL3-204ENST00000397289 DDX10Q13206 875 aaKnown RBP16.88■□□□□ 0.29
APOL3-204ENST00000397289 BICRAQ9NZM4 1560 aa16.87■□□□□ 0.29
APOL3-204ENST00000397289 ERICH3Q5RHP9 1530 aa16.86■□□□□ 0.29
APOL3-204ENST00000397289 CCNB3Q8WWL7 1395 aa16.86■□□□□ 0.29
APOL3-204ENST00000397289 PODXL2Q9NZ53 605 aa16.85■□□□□ 0.29
APOL3-204ENST00000397289 TOP2BQ02880 1626 aa16.85■□□□□ 0.29
APOL3-204ENST00000397289 MAPKBP1O60336 1514 aa16.84■□□□□ 0.29
APOL3-204ENST00000397289 RAB3GAP2Q9H2M9 1393 aa16.82■□□□□ 0.28
APOL3-204ENST00000397289 PRXQ9BXM0 1461 aa16.81■□□□□ 0.28
APOL3-204ENST00000397289 WDR97A6NE52 1622 aa16.81■□□□□ 0.28
APOL3-204ENST00000397289 TRIM52Q96A61 297 aa16.8■□□□□ 0.28
APOL3-204ENST00000397289 BIVM-ERCC5R4GMW8 1640 aa16.78■□□□□ 0.28
APOL3-204ENST00000397289 PPP1R15AO75807 674 aaPredicted RBP16.77■□□□□ 0.27
APOL3-204ENST00000397289 PABPN1Q86U42 306 aaKnown RBP eCLIP16.77■□□□□ 0.27
APOL3-204ENST00000397289 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.77■□□□□ 0.27
APOL3-204ENST00000397289 SIN3AQ96ST3 1273 aa16.73■□□□□ 0.27
APOL3-204ENST00000397289 CCER2I3L3R5 266 aa16.73■□□□□ 0.27
APOL3-204ENST00000397289 ANP32CO43423 234 aa16.71■□□□□ 0.27
APOL3-204ENST00000397289 HIRIP3Q9BW71 556 aaPredicted RBP16.71■□□□□ 0.27
APOL3-204ENST00000397289 ATAD2BQ9ULI0 1458 aa16.71■□□□□ 0.27
APOL3-204ENST00000397289 SETD5Q9C0A6 1442 aa16.7■□□□□ 0.26
APOL3-204ENST00000397289 ARHGAP35Q9NRY4 1499 aa16.69■□□□□ 0.26
APOL3-204ENST00000397289 IL27Q8NEV9 243 aa16.65■□□□□ 0.26
APOL3-204ENST00000397289 TIAM1Q13009 1591 aa16.63■□□□□ 0.25
APOL3-204ENST00000397289 TIMELESSQ9UNS1 1208 aa16.62■□□□□ 0.25
APOL3-204ENST00000397289 KIF27Q86VH2 1401 aa16.62■□□□□ 0.25
APOL3-204ENST00000397289 CDK11AQ9UQ88 783 aaPredicted RBP16.61■□□□□ 0.25
APOL3-204ENST00000397289 FAM50AQ14320 339 aaKnown RBP16.59■□□□□ 0.25
APOL3-204ENST00000397289 IRX6P78412 446 aaPredicted RBP16.58■□□□□ 0.24
APOL3-204ENST00000397289 CUX1P39880 1505 aa16.57■□□□□ 0.24
APOL3-204ENST00000397289 MAP3K1Q13233 1512 aa16.57■□□□□ 0.24
APOL3-204ENST00000397289 PHLDB1Q86UU1 1377 aa16.56■□□□□ 0.24
APOL3-204ENST00000397289 LRRC9Q6ZRR7 1453 aa16.55■□□□□ 0.24
APOL3-204ENST00000397289 HNRNPUQ00839 825 aaKnown RBP eCLIP16.54■□□□□ 0.24
APOL3-204ENST00000397289 RTN4Q9NQC3 1192 aaKnown RBP16.52■□□□□ 0.24
APOL3-204ENST00000397289 TONSLQ96HA7 1378 aa16.48■□□□□ 0.23
APOL3-204ENST00000397289 CFAP43Q8NDM7 1665 aa16.47■□□□□ 0.23
APOL3-204ENST00000397289 GLIPR1L2Q4G1C9 344 aa16.46■□□□□ 0.23
APOL3-204ENST00000397289 C11orf95C9JLR9 678 aaPredicted RBP16.45■□□□□ 0.22
APOL3-204ENST00000397289 HMGXB3Q12766 1538 aa16.44■□□□□ 0.22
APOL3-204ENST00000397289 PPP4R2Q9NY27 417 aa16.43■□□□□ 0.22
APOL3-204ENST00000397289 NOP58Q9Y2X3 529 aaKnown RBP16.43■□□□□ 0.22
APOL3-204ENST00000397289 NCAPD3P42695 1498 aa16.43■□□□□ 0.22
APOL3-204ENST00000397289 NBR1Q14596 966 aa16.41■□□□□ 0.22
APOL3-204ENST00000397289 PCF11O94913 1555 aaKnown RBP16.41■□□□□ 0.22
APOL3-204ENST00000397289 ZMYND15Q9H091 742 aa16.41■□□□□ 0.22
APOL3-204ENST00000397289 ATP1B4Q9UN42 357 aaPredicted RBP16.41■□□□□ 0.22
APOL3-204ENST00000397289 FHAD1B1AJZ9 1412 aa16.4■□□□□ 0.22
APOL3-204ENST00000397289 IGF1RP08069 1367 aa16.39■□□□□ 0.21
APOL3-204ENST00000397289 RTL5Q5HYW3 569 aaPredicted RBP16.37■□□□□ 0.21
APOL3-204ENST00000397289 P3H3Q8IVL6 736 aa16.37■□□□□ 0.21
APOL3-204ENST00000397289 CCDC18Q5T9S5 1454 aa16.36■□□□□ 0.21
APOL3-204ENST00000397289 B4GALNT3Q6L9W6 998 aa16.35■□□□□ 0.21
APOL3-204ENST00000397289 RSPH6AQ9H0K4 717 aa16.35■□□□□ 0.21
APOL3-204ENST00000397289 CARMIL1Q5VZK9 1371 aa16.34■□□□□ 0.21
APOL3-204ENST00000397289 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.34■□□□□ 0.21
APOL3-204ENST00000397289 WASHC2AQ641Q2 1341 aa16.32■□□□□ 0.2
APOL3-204ENST00000397289 UACAQ9BZF9 1416 aa16.32■□□□□ 0.2
APOL3-204ENST00000397289 CCDC184Q52MB2 194 aa16.31■□□□□ 0.2
APOL3-204ENST00000397289 CFTRP13569 1480 aa16.3■□□□□ 0.2
APOL3-204ENST00000397289 WASHC2CQ9Y4E1 1318 aa16.3■□□□□ 0.2
APOL3-204ENST00000397289 KDM5BQ9UGL1 1544 aa16.3■□□□□ 0.2
APOL3-204ENST00000397289 PTPN23Q9H3S7 1636 aa16.29■□□□□ 0.2
APOL3-204ENST00000397289 HSPA5P11021 654 aaKnown RBP16.29■□□□□ 0.2
APOL3-204ENST00000397289 PAK3O75914 559 aaPredicted RBP16.28■□□□□ 0.2
APOL3-204ENST00000397289 FGD6Q6ZV73 1430 aa16.28■□□□□ 0.2
APOL3-204ENST00000397289 FYCO1Q9BQS8 1478 aa16.28■□□□□ 0.2
APOL3-204ENST00000397289 FAM9BQ8IZU0 186 aa16.27■□□□□ 0.2
APOL3-204ENST00000397289 HFM1A2PYH4 1435 aa16.27■□□□□ 0.2
APOL3-204ENST00000397289 PRDM2Q13029 1718 aa16.27■□□□□ 0.2
APOL3-204ENST00000397289 VSIG10Q8N0Z9 540 aa16.27■□□□□ 0.19
APOL3-204ENST00000397289 FHOD3Q2V2M9 1422 aa16.26■□□□□ 0.19
APOL3-204ENST00000397289 PTPRKQ15262 1439 aa16.25■□□□□ 0.19
APOL3-204ENST00000397289 CNTLNQ9NXG0 1405 aa16.24■□□□□ 0.19
APOL3-204ENST00000397289 NCOA2Q15596 1464 aa16.24■□□□□ 0.19
APOL3-204ENST00000397289 ZBED9Q6R2W3 1325 aa16.23■□□□□ 0.19
APOL3-204ENST00000397289 FGD5Q6ZNL6 1462 aa16.23■□□□□ 0.19
APOL3-204ENST00000397289 CASKIN1Q8WXD9 1431 aa16.23■□□□□ 0.19
APOL3-204ENST00000397289 FGD1P98174 961 aa16.22■□□□□ 0.19
APOL3-204ENST00000397289 AQRO60306 1485 aaKnown RBP eCLIP16.22■□□□□ 0.19
APOL3-204ENST00000397289 PDE4CQ08493 712 aa16.22■□□□□ 0.19
APOL3-204ENST00000397289 MRS2Q9HD23 443 aa16.22■□□□□ 0.19
APOL3-204ENST00000397289 NAIPQ13075 1403 aa16.21■□□□□ 0.19
APOL3-204ENST00000397289 EIF4G2P78344 907 aaKnown RBP eCLIP16.21■□□□□ 0.19
APOL3-204ENST00000397289 PRKRIP1Q9H875 184 aaPredicted RBP16.21■□□□□ 0.19
APOL3-204ENST00000397289 AAMPQ13685 434 aa16.18■□□□□ 0.18
APOL3-204ENST00000397289 EFCAB5A4FU69 1503 aa16.18■□□□□ 0.18
APOL3-204ENST00000397289 FMN1Q68DA7 1419 aa16.17■□□□□ 0.18
APOL3-204ENST00000397289 USP35Q9P2H5 1018 aa16.17■□□□□ 0.18
APOL3-204ENST00000397289 MTUS2Q5JR59 1369 aa16.16■□□□□ 0.18
APOL3-204ENST00000397289 ANP32AP39687 249 aaKnown RBP16.15■□□□□ 0.18
APOL3-204ENST00000397289 IPO9Q96P70 1041 aaKnown RBP16.15■□□□□ 0.18
APOL3-204ENST00000397289 CCDC7Q96M83 1385 aa16.14■□□□□ 0.17
APOL3-204ENST00000397289 PDIA4P13667 645 aaKnown RBP16.14■□□□□ 0.17
APOL3-204ENST00000397289 CTTNBP2Q8WZ74 1663 aa16.13■□□□□ 0.17
APOL3-204ENST00000397289 AKNAQ7Z591 1439 aa16.13■□□□□ 0.17
APOL3-204ENST00000397289 LRRIQ1Q96JM4 1722 aa16.13■□□□□ 0.17
APOL3-204ENST00000397289 RBM10P98175 930 aaKnown RBP16.13■□□□□ 0.17
APOL3-204ENST00000397289 NCOA1Q15788 1441 aa16.12■□□□□ 0.17
APOL3-204ENST00000397289 ZBTB47Q9UFB7 747 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms