RNA–Protein interactions for RNA: ENST00000397289.6

APOL3-204, Transcript of apolipoprotein L3, humanhuman

TSL 1 (best)

Gene APOL3, Length 2,214 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOL3-204ENST00000397289 NISCHQ9Y2I1 1504 aa22.87■■□□□ 1.25
APOL3-204ENST00000397289 PELP1Q8IZL8 1130 aaKnown RBP21.01■□□□□ 0.95
APOL3-204ENST00000397289 MYT1Q01538 1121 aa20.58■□□□□ 0.89
APOL3-204ENST00000397289 SHROOM4Q9ULL8 1493 aa20.09■□□□□ 0.81
APOL3-204ENST00000397289 HRCP23327 699 aa20.01■□□□□ 0.79
APOL3-204ENST00000397289 SUPT5HO00267 1087 aaKnown RBP19.96■□□□□ 0.79
APOL3-204ENST00000397289 MYO15BQ96JP2 1530 aa19.73■□□□□ 0.75
APOL3-204ENST00000397289 TTBK1Q5TCY1 1321 aaPredicted RBP19.72■□□□□ 0.75
APOL3-204ENST00000397289 PCGF6Q9BYE7 350 aa19.67■□□□□ 0.74
APOL3-204ENST00000397289 CHIC1Q5VXU3 224 aa19.6■□□□□ 0.73
APOL3-204ENST00000397289 PPARGC1BQ86YN6 1023 aaKnown RBP19.59■□□□□ 0.73
APOL3-204ENST00000397289 ZCCHC6Q5VYS8 1495 aaKnown RBP19.43■□□□□ 0.7
APOL3-204ENST00000397289 SCAF1Q9H7N4 1312 aaKnown RBP19.42■□□□□ 0.7
APOL3-204ENST00000397289 DCAF1Q9Y4B6 1507 aa19.29■□□□□ 0.68
APOL3-204ENST00000397289 CCDC180Q9P1Z9 1646 aa19.24■□□□□ 0.67
APOL3-204ENST00000397289 LOC105371045A0A1W2PR82 267 aa19.14■□□□□ 0.65
APOL3-204ENST00000397289 TRIM26Q12899 539 aaPredicted RBP19.09■□□□□ 0.65
APOL3-204ENST00000397289 DCAF8L2P0C7V8 631 aa18.99■□□□□ 0.63
APOL3-204ENST00000397289 PRKCSHP14314 528 aaPredicted RBP18.98■□□□□ 0.63
APOL3-204ENST00000397289 ZEB1P37275 1124 aaPredicted RBP18.89■□□□□ 0.61
APOL3-204ENST00000397289 BCL11AQ9H165 835 aa18.86■□□□□ 0.61
APOL3-204ENST00000397289 ACIN1Q9UKV3 1341 aaKnown RBP18.68■□□□□ 0.58
APOL3-204ENST00000397289 FAM9AQ8IZU1 332 aaPredicted RBP18.65■□□□□ 0.58
APOL3-204ENST00000397289 ERICH6Q7L0X2 663 aa18.65■□□□□ 0.58
APOL3-204ENST00000397289 CENPBP07199 599 aaPredicted RBP18.59■□□□□ 0.57
APOL3-204ENST00000397289 APLP2Q06481 763 aa18.58■□□□□ 0.56
APOL3-204ENST00000397289 TRIM41Q8WV44 630 aa18.49■□□□□ 0.55
APOL3-204ENST00000397289 NEUROD1Q13562 356 aa18.49■□□□□ 0.55
APOL3-204ENST00000397289 ABCC9O60706 1549 aa18.47■□□□□ 0.55
APOL3-204ENST00000397289 GTF3C3Q9Y5Q9 886 aa18.47■□□□□ 0.55
APOL3-204ENST00000397289 EHMT2Q96KQ7 1210 aa18.36■□□□□ 0.53
APOL3-204ENST00000397289 RSF1Q96T23 1441 aaPredicted RBP18.33■□□□□ 0.53
APOL3-204ENST00000397289 RB1CC1Q8TDY2 1594 aa18.3■□□□□ 0.52
APOL3-204ENST00000397289 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.28■□□□□ 0.52
APOL3-204ENST00000397289 CCER1Q8TC90 406 aaPredicted RBP18.25■□□□□ 0.51
APOL3-204ENST00000397289 ANP32EQ9BTT0 268 aa18.22■□□□□ 0.51
APOL3-204ENST00000397289 DIEXFQ68CQ4 756 aaKnown RBP18.21■□□□□ 0.51
APOL3-204ENST00000397289 SCRIBQ14160 1630 aa18.16■□□□□ 0.5
APOL3-204ENST00000397289 CSRNP3Q8WYN3 585 aa17.96■□□□□ 0.47
APOL3-204ENST00000397289 ZNF316A6NFI3 1004 aaPredicted RBP17.89■□□□□ 0.45
APOL3-204ENST00000397289 YTHDC1Q96MU7 727 aaKnown RBP17.89■□□□□ 0.45
APOL3-204ENST00000397289 CECR2Q9BXF3 1484 aa17.86■□□□□ 0.45
APOL3-204ENST00000397289 MROH2BQ7Z745 1585 aa17.85■□□□□ 0.45
APOL3-204ENST00000397289 WIZO95785 1651 aa17.84■□□□□ 0.45
APOL3-204ENST00000397289 WRNQ14191 1432 aaPredicted RBP eCLIP17.83■□□□□ 0.45
APOL3-204ENST00000397289 SLC24A1O60721 1099 aa17.79■□□□□ 0.44
APOL3-204ENST00000397289 NACADO15069 1562 aa17.78■□□□□ 0.44
APOL3-204ENST00000397289 EIF4G1Q04637 1599 aaKnown RBP17.76■□□□□ 0.43
APOL3-204ENST00000397289 CEP162Q5TB80 1403 aa17.76■□□□□ 0.43
APOL3-204ENST00000397289 MIER1Q8N108 512 aa17.75■□□□□ 0.43
APOL3-204ENST00000397289 BAZ1AQ9NRL2 1556 aaPredicted RBP17.7■□□□□ 0.42
APOL3-204ENST00000397289 ABCC8Q09428 1581 aa17.66■□□□□ 0.42
APOL3-204ENST00000397289 CCDC88BA6NC98 1476 aa17.65■□□□□ 0.42
APOL3-204ENST00000397289 TNIKQ9UKE5 1360 aa17.64■□□□□ 0.41
APOL3-204ENST00000397289 TSHZ2Q9NRE2 1034 aa17.63■□□□□ 0.41
APOL3-204ENST00000397289 CLSPNQ9HAW4 1339 aa17.6■□□□□ 0.41
APOL3-204ENST00000397289 SOGA1O94964 1423 aa17.58■□□□□ 0.4
APOL3-204ENST00000397289 UBTFP17480 764 aaKnown RBP17.56■□□□□ 0.4
APOL3-204ENST00000397289 HNRNPUL2Q1KMD3 747 aaKnown RBP17.54■□□□□ 0.4
APOL3-204ENST00000397289 UBE2Q2Q8WVN8 375 aa17.5■□□□□ 0.39
APOL3-204ENST00000397289 RUSC2Q8N2Y8 1516 aa17.49■□□□□ 0.39
APOL3-204ENST00000397289 ANO8Q9HCE9 1232 aaPredicted RBP17.48■□□□□ 0.39
APOL3-204ENST00000397289 EEA1Q15075 1411 aa17.47■□□□□ 0.39
APOL3-204ENST00000397289 TOP2AP11388 1531 aaKnown RBP17.46■□□□□ 0.39
APOL3-204ENST00000397289 GOLGA3Q08378 1498 aa17.45■□□□□ 0.38
APOL3-204ENST00000397289 SUPT16HQ9Y5B9 1047 aaKnown RBP17.44■□□□□ 0.38
APOL3-204ENST00000397289 SMARCA2P51531 1590 aa17.42■□□□□ 0.38
APOL3-204ENST00000397289 DAXXQ9UER7 740 aaPredicted RBP17.39■□□□□ 0.37
APOL3-204ENST00000397289 EIF5BO60841 1220 aaKnown RBP17.39■□□□□ 0.37
APOL3-204ENST00000397289 SMARCA4P51532 1647 aa17.32■□□□□ 0.36
APOL3-204ENST00000397289 CLIP1P30622 1438 aa17.29■□□□□ 0.36
APOL3-204ENST00000397289 CEP164Q9UPV0 1460 aa17.28■□□□□ 0.36
APOL3-204ENST00000397289 MYT1LQ9UL68 1186 aa17.28■□□□□ 0.36
APOL3-204ENST00000397289 VPS8Q8N3P4 1428 aa17.27■□□□□ 0.36
APOL3-204ENST00000397289 KIF21BO75037 1637 aa17.27■□□□□ 0.35
APOL3-204ENST00000397289 ERICH6BQ5W0A0 696 aa17.25■□□□□ 0.35
APOL3-204ENST00000397289 DHX57Q6P158 1386 aaKnown RBP17.21■□□□□ 0.34
APOL3-204ENST00000397289 SALL2Q9Y467 1007 aaPredicted RBP17.18■□□□□ 0.34
APOL3-204ENST00000397289 UNC13AQ9UPW8 1703 aa17.16■□□□□ 0.34
APOL3-204ENST00000397289 RANGAP1P46060 587 aaPredicted RBP17.16■□□□□ 0.34
APOL3-204ENST00000397289 SYNJ1O43426 1573 aa17.15■□□□□ 0.34
APOL3-204ENST00000397289 BAZ1BQ9UIG0 1483 aaKnown RBP17.14■□□□□ 0.33
APOL3-204ENST00000397289 RAPGEF2Q9Y4G8 1499 aa17.11■□□□□ 0.33
APOL3-204ENST00000397289 RBM19Q9Y4C8 960 aaKnown RBP17.08■□□□□ 0.33
APOL3-204ENST00000397289 BCANQ96GW7 911 aa17.08■□□□□ 0.32
APOL3-204ENST00000397289 KCNH8Q96L42 1107 aa17.08■□□□□ 0.32
APOL3-204ENST00000397289 DEKP35659 375 aaKnown RBP17.05■□□□□ 0.32
APOL3-204ENST00000397289 MSH5O43196 834 aa17.04■□□□□ 0.32
APOL3-204ENST00000397289 FKBP8Q14318 412 aa17.01■□□□□ 0.31
APOL3-204ENST00000397289 PKNOX2Q96KN3 472 aa17.01■□□□□ 0.31
APOL3-204ENST00000397289 CCDC136Q96JN2 1154 aa17■□□□□ 0.31
APOL3-204ENST00000397289 KANK4Q5T7N3 995 aaPredicted RBP16.98■□□□□ 0.31
APOL3-204ENST00000397289 FANCIQ9NVI1 1328 aa16.94■□□□□ 0.3
APOL3-204ENST00000397289 RRBP1Q9P2E9 1410 aaKnown RBP16.94■□□□□ 0.3
APOL3-204ENST00000397289 ARAP1Q96P48 1450 aa16.94■□□□□ 0.3
APOL3-204ENST00000397289 PLEKHG5O94827 1062 aa16.93■□□□□ 0.3
APOL3-204ENST00000397289 PEG3Q9GZU2 1588 aa16.93■□□□□ 0.3
APOL3-204ENST00000397289 CUX2O14529 1486 aa16.93■□□□□ 0.3
APOL3-204ENST00000397289 NEFLP07196 543 aa16.88■□□□□ 0.29
APOL3-204ENST00000397289 ITGAEP38570 1179 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms