RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 CCNB3Q8WWL7 1395 aa35.18■■■■□ 3.22
PABPN1-202ENST00000397276 TDRD9Q8NDG6 1382 aaKnown RBP35.17■■■■□ 3.22
PABPN1-202ENST00000397276 FHOD3Q2V2M9 1422 aa35.1■■■■□ 3.21
PABPN1-202ENST00000397276 PDS5BQ9NTI5 1447 aa35.1■■■■□ 3.21
PABPN1-202ENST00000397276 DHX57Q6P158 1386 aaKnown RBP35.09■■■■□ 3.21
PABPN1-202ENST00000397276 TIAM1Q13009 1591 aa35.08■■■■□ 3.21
PABPN1-202ENST00000397276 CENPBP07199 599 aaPredicted RBP35.08■■■■□ 3.21
PABPN1-202ENST00000397276 FHAD1B1AJZ9 1412 aa35.05■■■■□ 3.2
PABPN1-202ENST00000397276 LRRC9Q6ZRR7 1453 aa35.01■■■■□ 3.19
PABPN1-202ENST00000397276 CUL7Q14999 1698 aa34.97■■■■□ 3.19
PABPN1-202ENST00000397276 PCF11O94913 1555 aaKnown RBP34.96■■■■□ 3.19
PABPN1-202ENST00000397276 PHLDB1Q86UU1 1377 aa34.95■■■■□ 3.19
PABPN1-202ENST00000397276 FAM50AQ14320 339 aaKnown RBP34.95■■■■□ 3.19
PABPN1-202ENST00000397276 MAP3K1Q13233 1512 aa34.95■■■■□ 3.18
PABPN1-202ENST00000397276 GAPVD1Q14C86 1478 aa34.94■■■■□ 3.18
PABPN1-202ENST00000397276 KIF21AQ7Z4S6 1674 aa34.91■■■■□ 3.18
PABPN1-202ENST00000397276 CLSPNQ9HAW4 1339 aa34.9■■■■□ 3.18
PABPN1-202ENST00000397276 WDR97A6NE52 1622 aa34.89■■■■□ 3.18
PABPN1-202ENST00000397276 ABCA5Q8WWZ7 1642 aa34.83■■■■□ 3.17
PABPN1-202ENST00000397276 YTHDC1Q96MU7 727 aaKnown RBP34.83■■■■□ 3.17
PABPN1-202ENST00000397276 EFCAB5A4FU69 1503 aa34.82■■■■□ 3.16
PABPN1-202ENST00000397276 CTTNBP2Q8WZ74 1663 aa34.82■■■■□ 3.16
PABPN1-202ENST00000397276 RAB3GAP2Q9H2M9 1393 aa34.81■■■■□ 3.16
PABPN1-202ENST00000397276 CASKIN1Q8WXD9 1431 aa34.79■■■■□ 3.16
PABPN1-202ENST00000397276 FYCO1Q9BQS8 1478 aa34.77■■■■□ 3.16
PABPN1-202ENST00000397276 MIER1Q8N108 512 aa34.75■■■■□ 3.15
PABPN1-202ENST00000397276 CFAP43Q8NDM7 1665 aa34.75■■■■□ 3.15
PABPN1-202ENST00000397276 FMN1Q68DA7 1419 aa34.73■■■■□ 3.15
PABPN1-202ENST00000397276 AQRO60306 1485 aaKnown RBP eCLIP34.68■■■■□ 3.146e-8■■■■□ 24.8
PABPN1-202ENST00000397276 SETD5Q9C0A6 1442 aa34.67■■■■□ 3.14
PABPN1-202ENST00000397276 TARBP1Q13395 1621 aaKnown RBP34.66■■■■□ 3.14
PABPN1-202ENST00000397276 SNAPC4Q5SXM2 1469 aa34.61■■■■□ 3.13
PABPN1-202ENST00000397276 MTUS2Q5JR59 1369 aa34.61■■■■□ 3.13
PABPN1-202ENST00000397276 SAMD9Q5K651 1589 aa34.54■■■■□ 3.12
PABPN1-202ENST00000397276 MRC2Q9UBG0 1479 aa34.54■■■■□ 3.12
PABPN1-202ENST00000397276 MAPKBP1O60336 1514 aa34.5■■■■□ 3.11
PABPN1-202ENST00000397276 SIN3AQ96ST3 1273 aa34.49■■■■□ 3.11
PABPN1-202ENST00000397276 FGD6Q6ZV73 1430 aa34.46■■■■□ 3.11
PABPN1-202ENST00000397276 ARID3CA6NKF2 412 aa34.45■■■■□ 3.11
PABPN1-202ENST00000397276 GRIN2BQ13224 1484 aa34.43■■■■□ 3.1
PABPN1-202ENST00000397276 PBRM1Q86U86 1689 aa34.43■■■■□ 3.1
PABPN1-202ENST00000397276 ZNF608Q9ULD9 1512 aaPredicted RBP34.41■■■■□ 3.1
PABPN1-202ENST00000397276 LRRIQ1Q96JM4 1722 aa34.4■■■■□ 3.1
PABPN1-202ENST00000397276 NCOA2Q15596 1464 aa34.36■■■■□ 3.09
PABPN1-202ENST00000397276 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.35■■■■□ 3.091e-10■□□□□ 11
PABPN1-202ENST00000397276 ADAMTS12P58397 1594 aa34.33■■■■□ 3.09
PABPN1-202ENST00000397276 IQGAP2Q13576 1575 aa34.31■■■■□ 3.08
PABPN1-202ENST00000397276 PTPRKQ15262 1439 aa34.3■■■■□ 3.08
PABPN1-202ENST00000397276 MYT1Q01538 1121 aa34.27■■■■□ 3.08
PABPN1-202ENST00000397276 IFT140Q96RY7 1462 aa34.27■■■■□ 3.08
PABPN1-202ENST00000397276 MYOM3Q5VTT5 1437 aa34.27■■■■□ 3.08
PABPN1-202ENST00000397276 MAGI3Q5TCQ9 1506 aa34.24■■■■□ 3.07
PABPN1-202ENST00000397276 THOC2Q8NI27 1593 aaKnown RBP34.21■■■■□ 3.07
PABPN1-202ENST00000397276 ERCC6Q03468 1493 aa34.21■■■■□ 3.07
PABPN1-202ENST00000397276 EHBP1L1Q8N3D4 1523 aa34.2■■■■□ 3.07
PABPN1-202ENST00000397276 WDR62O43379 1518 aa34.2■■■■□ 3.06
PABPN1-202ENST00000397276 SUPT6HQ7KZ85 1726 aaKnown RBP34.19■■■■□ 3.06
PABPN1-202ENST00000397276 CHIC2Q9UKJ5 165 aa34.19■■■■□ 3.06
PABPN1-202ENST00000397276 CCDC18Q5T9S5 1454 aa34.16■■■■□ 3.06
PABPN1-202ENST00000397276 CDK13Q14004 1512 aaKnown RBP34.16■■■■□ 3.06
PABPN1-202ENST00000397276 EPRSP07814 1512 aaKnown RBP34.14■■■■□ 3.06
PABPN1-202ENST00000397276 RRP7BPQ9NSQ0 103 aa34.13■■■■□ 3.05
PABPN1-202ENST00000397276 FBLN2P98095 1184 aa34.12■■■■□ 3.05
PABPN1-202ENST00000397276 UGGT2Q9NYU1 1516 aa34.12■■■■□ 3.05
PABPN1-202ENST00000397276 HECW1Q76N89 1606 aa34.12■■■■□ 3.05
PABPN1-202ENST00000397276 HFM1A2PYH4 1435 aa34.12■■■■□ 3.05
PABPN1-202ENST00000397276 PTPN23Q9H3S7 1636 aa34.07■■■■□ 3.05
PABPN1-202ENST00000397276 NAIPQ13075 1403 aa34.07■■■■□ 3.04
PABPN1-202ENST00000397276 HIRIP3Q9BW71 556 aaPredicted RBP34.07■■■■□ 3.04
PABPN1-202ENST00000397276 CHMP7Q8WUX9 453 aaPredicted RBP34.06■■■■□ 3.04
PABPN1-202ENST00000397276 KIAA0586Q9BVV6 1533 aa34.04■■■■□ 3.04
PABPN1-202ENST00000397276 EIF4G3O43432 1585 aaKnown RBP34.04■■■■□ 3.04
PABPN1-202ENST00000397276 ARHGEF11O15085 1522 aa34.03■■■■□ 3.04
PABPN1-202ENST00000397276 PPP1R15AO75807 674 aaPredicted RBP34.02■■■■□ 3.04
PABPN1-202ENST00000397276 GRIN2AQ12879 1464 aa34.01■■■■□ 3.04
PABPN1-202ENST00000397276 UACAQ9BZF9 1416 aa34.01■■■■□ 3.03
PABPN1-202ENST00000397276 TIMELESSQ9UNS1 1208 aa34■■■■□ 3.03
PABPN1-202ENST00000397276 DISP1Q96F81 1524 aa33.99■■■■□ 3.03
PABPN1-202ENST00000397276 TONSLQ96HA7 1378 aa33.96■■■■□ 3.03
PABPN1-202ENST00000397276 DDX10Q13206 875 aaKnown RBP33.95■■■■□ 3.03
PABPN1-202ENST00000397276 TRIM52Q96A61 297 aa33.94■■■■□ 3.02
PABPN1-202ENST00000397276 KIAA0556O60303 1618 aa33.93■■■■□ 3.02
PABPN1-202ENST00000397276 TCOF1Q13428 1488 aaKnown RBP33.89■■■■□ 3.02
PABPN1-202ENST00000397276 NUP153P49790 1475 aaKnown RBP33.85■■■■□ 3.01
PABPN1-202ENST00000397276 ZNF644Q9H582 1327 aaPredicted RBP33.85■■■■□ 3.01
PABPN1-202ENST00000397276 KCNH8Q96L42 1107 aa33.84■■■■□ 3.01
PABPN1-202ENST00000397276 MIA2Q96PC5 1412 aa33.83■■■■□ 3.01
PABPN1-202ENST00000397276 MAGI1Q96QZ7 1491 aaPredicted RBP33.81■■■■□ 3
PABPN1-202ENST00000397276 CDK11AQ9UQ88 783 aaPredicted RBP33.81■■■■□ 3
PABPN1-202ENST00000397276 SYNJ2O15056 1496 aa33.79■■■■□ 3
PABPN1-202ENST00000397276 CEP170Q5SW79 1584 aa33.78■■■■□ 3
PABPN1-202ENST00000397276 JPH4Q96JJ6 628 aa33.78■■■■□ 3
PABPN1-202ENST00000397276 RAPGEF6Q8TEU7 1601 aa33.76■■■■□ 3
PABPN1-202ENST00000397276 PLB1Q6P1J6 1458 aa33.75■■■□□ 2.99
PABPN1-202ENST00000397276 KDM6BO15054 1643 aa33.75■■■□□ 2.99
PABPN1-202ENST00000397276 FOXD1Q16676 465 aa33.74■■■□□ 2.99
PABPN1-202ENST00000397276 PRG4Q92954 1404 aaPredicted RBP33.73■■■□□ 2.99
PABPN1-202ENST00000397276 SUPT16HQ9Y5B9 1047 aaKnown RBP33.73■■■□□ 2.99
PABPN1-202ENST00000397276 MPHOSPH9Q99550 1183 aa33.7■■■□□ 2.99
PABPN1-202ENST00000397276 ZNF777Q9ULD5 760 aaPredicted RBP33.68■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms