RNA–Protein interactions for RNA: ENST00000397113.6

FGFR1-209, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene FGFR1, Length 3,680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-209ENST00000397113 GOLGA3Q08378 1498 aa14.86□□□□□ -0.03
FGFR1-209ENST00000397113 SHROOM2Q13796 1616 aa14.86□□□□□ -0.03
FGFR1-209ENST00000397113 EFCAB5A4FU69 1503 aa14.86□□□□□ -0.03
FGFR1-209ENST00000397113 CEP162Q5TB80 1403 aa14.86□□□□□ -0.03
FGFR1-209ENST00000397113 NESP48681 1621 aa14.85□□□□□ -0.03
FGFR1-209ENST00000397113 TNIKQ9UKE5 1360 aa14.85□□□□□ -0.03
FGFR1-209ENST00000397113 CSRNP3Q8WYN3 585 aa14.85□□□□□ -0.03
FGFR1-209ENST00000397113 LRRIQ1Q96JM4 1722 aa14.84□□□□□ -0.03
FGFR1-209ENST00000397113 EIF4G3O43432 1585 aaKnown RBP14.83□□□□□ -0.04
FGFR1-209ENST00000397113 IFT140Q96RY7 1462 aa14.81□□□□□ -0.04
FGFR1-209ENST00000397113 RUSC2Q8N2Y8 1516 aa14.8□□□□□ -0.04
FGFR1-209ENST00000397113 SOGA1O94964 1423 aa14.8□□□□□ -0.04
FGFR1-209ENST00000397113 SLC24A1O60721 1099 aa14.8□□□□□ -0.04
FGFR1-209ENST00000397113 FKBP8Q14318 412 aa14.8□□□□□ -0.04
FGFR1-209ENST00000397113 KCNH8Q96L42 1107 aa14.79□□□□□ -0.04
FGFR1-209ENST00000397113 AQRO60306 1485 aaKnown RBP eCLIP14.78□□□□□ -0.04
FGFR1-209ENST00000397113 BCL11AQ9H165 835 aa14.77□□□□□ -0.04
FGFR1-209ENST00000397113 TSHZ2Q9NRE2 1034 aa14.77□□□□□ -0.04
FGFR1-209ENST00000397113 ANP32EQ9BTT0 268 aa14.77□□□□□ -0.05
FGFR1-209ENST00000397113 NEFLP07196 543 aa14.75□□□□□ -0.05
FGFR1-209ENST00000397113 HIRIP3Q9BW71 556 aaPredicted RBP14.75□□□□□ -0.05
FGFR1-209ENST00000397113 KIF27Q86VH2 1401 aa14.74□□□□□ -0.05
FGFR1-209ENST00000397113 UGGT2Q9NYU1 1516 aa14.72□□□□□ -0.05
FGFR1-209ENST00000397113 ERICH6Q7L0X2 663 aa14.72□□□□□ -0.05
FGFR1-209ENST00000397113 TRIM52Q96A61 297 aa14.71□□□□□ -0.05
FGFR1-209ENST00000397113 ATP1B4Q9UN42 357 aaPredicted RBP14.7□□□□□ -0.06
FGFR1-209ENST00000397113 DDX10Q13206 875 aaKnown RBP14.68□□□□□ -0.06
FGFR1-209ENST00000397113 ADCY10Q96PN6 1610 aa14.68□□□□□ -0.06
FGFR1-209ENST00000397113 MAGI1Q96QZ7 1491 aaPredicted RBP14.68□□□□□ -0.06
FGFR1-209ENST00000397113 RAPGEF2Q9Y4G8 1499 aa14.66□□□□□ -0.06
FGFR1-209ENST00000397113 ARAP1Q96P48 1450 aa14.66□□□□□ -0.06
FGFR1-209ENST00000397113 IGF1RP08069 1367 aa14.65□□□□□ -0.06
FGFR1-209ENST00000397113 IRX6P78412 446 aaPredicted RBP14.64□□□□□ -0.07
FGFR1-209ENST00000397113 ARHGEF11O15085 1522 aa14.63□□□□□ -0.07
FGFR1-209ENST00000397113 CNGB1Q14028 1251 aaPredicted RBP14.61□□□□□ -0.07
FGFR1-209ENST00000397113 CLASP1Q7Z460 1538 aa14.59□□□□□ -0.07
FGFR1-209ENST00000397113 SNAPC4Q5SXM2 1469 aa14.59□□□□□ -0.07
FGFR1-209ENST00000397113 GRIN2BQ13224 1484 aa14.58□□□□□ -0.08
FGFR1-209ENST00000397113 PRKCSHP14314 528 aaPredicted RBP14.57□□□□□ -0.08
FGFR1-209ENST00000397113 NUP160Q12769 1436 aa14.57□□□□□ -0.08
FGFR1-209ENST00000397113 GAPVD1Q14C86 1478 aa14.57□□□□□ -0.08
FGFR1-209ENST00000397113 CHD1O14646 1710 aa14.56□□□□□ -0.08
FGFR1-209ENST00000397113 CEP170Q5SW79 1584 aa14.56□□□□□ -0.08
FGFR1-209ENST00000397113 FHAD1B1AJZ9 1412 aa14.55□□□□□ -0.08
FGFR1-209ENST00000397113 IQGAP2Q13576 1575 aa14.55□□□□□ -0.08
FGFR1-209ENST00000397113 ARHGAP35Q9NRY4 1499 aa14.55□□□□□ -0.08
FGFR1-209ENST00000397113 KIAA0556O60303 1618 aa14.54□□□□□ -0.08
FGFR1-209ENST00000397113 CLIP1P30622 1438 aa14.54□□□□□ -0.08
FGFR1-209ENST00000397113 RBM19Q9Y4C8 960 aaKnown RBP14.53□□□□□ -0.08
FGFR1-209ENST00000397113 RAD54L2Q9Y4B4 1467 aa14.52□□□□□ -0.08
FGFR1-209ENST00000397113 FYCO1Q9BQS8 1478 aa14.52□□□□□ -0.09
FGFR1-209ENST00000397113 TIAM1Q13009 1591 aa14.51□□□□□ -0.09
FGFR1-209ENST00000397113 VPS8Q8N3P4 1428 aa14.5□□□□□ -0.09
FGFR1-209ENST00000397113 FAM50AQ14320 339 aaKnown RBP14.5□□□□□ -0.09
FGFR1-209ENST00000397113 KANK4Q5T7N3 995 aaPredicted RBP14.48□□□□□ -0.09
FGFR1-209ENST00000397113 PCF11O94913 1555 aaKnown RBP14.48□□□□□ -0.09
FGFR1-209ENST00000397113 SYNJ2O15056 1496 aa14.47□□□□□ -0.09
FGFR1-209ENST00000397113 SIN3AQ96ST3 1273 aa14.47□□□□□ -0.09
FGFR1-209ENST00000397113 CLSPNQ9HAW4 1339 aa14.46□□□□□ -0.1
FGFR1-209ENST00000397113 GRIN2AQ12879 1464 aa14.45□□□□□ -0.1
FGFR1-209ENST00000397113 DNAJC5BQ9UF47 199 aa14.44□□□□□ -0.1
FGFR1-209ENST00000397113 ABCA8O94911 1581 aa14.43□□□□□ -0.1
FGFR1-209ENST00000397113 ANP32CO43423 234 aa14.43□□□□□ -0.1
FGFR1-209ENST00000397113 SENP3-EIF4A1A0A087X0R7 540 aa14.43□□□□□ -0.1
FGFR1-209ENST00000397113 DISP1Q96F81 1524 aa14.42□□□□□ -0.1
FGFR1-209ENST00000397113 CROCC2H7BZ55 1655 aa14.42□□□□□ -0.1
FGFR1-209ENST00000397113 KIAA0586Q9BVV6 1533 aa14.42□□□□□ -0.1
FGFR1-209ENST00000397113 HECW1Q76N89 1606 aa14.41□□□□□ -0.1
FGFR1-209ENST00000397113 HNRNPUQ00839 825 aaKnown RBP eCLIP14.4□□□□□ -0.14e-7■■□□□ 13.9
FGFR1-209ENST00000397113 NBR1Q14596 966 aa14.4□□□□□ -0.1
FGFR1-209ENST00000397113 P3H3Q8IVL6 736 aa14.4□□□□□ -0.1
FGFR1-209ENST00000397113 DHX57Q6P158 1386 aaKnown RBP14.39□□□□□ -0.11
FGFR1-209ENST00000397113 CDK11AQ9UQ88 783 aaPredicted RBP14.38□□□□□ -0.11
FGFR1-209ENST00000397113 CASKIN1Q8WXD9 1431 aa14.38□□□□□ -0.11
FGFR1-209ENST00000397113 ZNF608Q9ULD9 1512 aaPredicted RBP14.38□□□□□ -0.11
FGFR1-209ENST00000397113 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.38□□□□□ -0.114e-8■□□□□ 10.2
FGFR1-209ENST00000397113 CARMIL1Q5VZK9 1371 aa14.36□□□□□ -0.11
FGFR1-209ENST00000397113 RAPGEF6Q8TEU7 1601 aa14.35□□□□□ -0.11
FGFR1-209ENST00000397113 KDM5BQ9UGL1 1544 aa14.34□□□□□ -0.11
FGFR1-209ENST00000397113 GCC2Q8IWJ2 1684 aa14.34□□□□□ -0.11
FGFR1-209ENST00000397113 RRBP1Q9P2E9 1410 aaKnown RBP14.34□□□□□ -0.11
FGFR1-209ENST00000397113 POLR3GLQ9BT43 218 aa14.32□□□□□ -0.12
FGFR1-209ENST00000397113 CCDC18Q5T9S5 1454 aa14.32□□□□□ -0.12
FGFR1-209ENST00000397113 TCOF1Q13428 1488 aaKnown RBP14.3□□□□□ -0.12
FGFR1-209ENST00000397113 EHBP1L1Q8N3D4 1523 aa14.3□□□□□ -0.12
FGFR1-209ENST00000397113 UHRF1BP1LA0JNW5 1464 aa14.29□□□□□ -0.12
FGFR1-209ENST00000397113 SUPT6HQ7KZ85 1726 aaKnown RBP14.29□□□□□ -0.12
FGFR1-209ENST00000397113 ITSN2Q9NZM3 1697 aa14.28□□□□□ -0.12
FGFR1-209ENST00000397113 MSH5O43196 834 aa14.28□□□□□ -0.12
FGFR1-209ENST00000397113 FAM9BQ8IZU0 186 aa14.26□□□□□ -0.13
FGFR1-209ENST00000397113 BCORL1Q5H9F3 1711 aa14.25□□□□□ -0.13
FGFR1-209ENST00000397113 ARAP3Q8WWN8 1544 aa14.25□□□□□ -0.13
FGFR1-209ENST00000397113 ADGBQ8N7X0 1667 aa14.24□□□□□ -0.13
FGFR1-209ENST00000397113 B4GALNT3Q6L9W6 998 aa14.24□□□□□ -0.13
FGFR1-209ENST00000397113 MAGI3Q5TCQ9 1506 aa14.22□□□□□ -0.13
FGFR1-209ENST00000397113 CDC42BPAQ5VT25 1732 aa14.21□□□□□ -0.13
FGFR1-209ENST00000397113 LRRC9Q6ZRR7 1453 aa14.21□□□□□ -0.13
FGFR1-209ENST00000397113 FMN1Q68DA7 1419 aa14.21□□□□□ -0.13
FGFR1-209ENST00000397113 MAST1Q9Y2H9 1570 aa14.2□□□□□ -0.14
FGFR1-209ENST00000397113 RAB3GAP2Q9H2M9 1393 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms