RNA–Protein interactions for RNA: ENST00000397087.7

RAPGEF4-203, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-203ENST00000397087 FYCO1Q9BQS8 1478 aa9.39□□□□□ -0.91
RAPGEF4-203ENST00000397087 IGF1RP08069 1367 aa9.38□□□□□ -0.91
RAPGEF4-203ENST00000397087 ARHGAP35Q9NRY4 1499 aa9.38□□□□□ -0.91
RAPGEF4-203ENST00000397087 ADAMTS12P58397 1594 aa9.38□□□□□ -0.91
RAPGEF4-203ENST00000397087 MRC2Q9UBG0 1479 aa9.36□□□□□ -0.91
RAPGEF4-203ENST00000397087 FHAD1B1AJZ9 1412 aa9.36□□□□□ -0.91
RAPGEF4-203ENST00000397087 CLSPNQ9HAW4 1339 aa9.35□□□□□ -0.91
RAPGEF4-203ENST00000397087 PPARGC1BQ86YN6 1023 aaKnown RBP9.33□□□□□ -0.92
RAPGEF4-203ENST00000397087 IFT140Q96RY7 1462 aa9.32□□□□□ -0.92
RAPGEF4-203ENST00000397087 UGGT2Q9NYU1 1516 aa9.31□□□□□ -0.92
RAPGEF4-203ENST00000397087 CASKIN1Q8WXD9 1431 aa9.31□□□□□ -0.92
RAPGEF4-203ENST00000397087 ARHGEF11O15085 1522 aa9.3□□□□□ -0.92
RAPGEF4-203ENST00000397087 TTBK1Q5TCY1 1321 aaPredicted RBP9.3□□□□□ -0.92
RAPGEF4-203ENST00000397087 CARMIL1Q5VZK9 1371 aa9.3□□□□□ -0.92
RAPGEF4-203ENST00000397087 PCF11O94913 1555 aaKnown RBP9.29□□□□□ -0.92
RAPGEF4-203ENST00000397087 SNAPC4Q5SXM2 1469 aa9.29□□□□□ -0.92
RAPGEF4-203ENST00000397087 CCDC18Q5T9S5 1454 aa9.27□□□□□ -0.92
RAPGEF4-203ENST00000397087 LRRIQ1Q96JM4 1722 aa9.27□□□□□ -0.93
RAPGEF4-203ENST00000397087 GAPVD1Q14C86 1478 aa9.27□□□□□ -0.93
RAPGEF4-203ENST00000397087 HECW1Q76N89 1606 aa9.26□□□□□ -0.93
RAPGEF4-203ENST00000397087 FMN1Q68DA7 1419 aa9.26□□□□□ -0.93
RAPGEF4-203ENST00000397087 KCNA4P22459 653 aa9.26□□□□□ -0.93
RAPGEF4-203ENST00000397087 ADCY10Q96PN6 1610 aa9.26□□□□□ -0.93
RAPGEF4-203ENST00000397087 GRIN2BQ13224 1484 aa9.26□□□□□ -0.93
RAPGEF4-203ENST00000397087 EHBP1L1Q8N3D4 1523 aa9.25□□□□□ -0.93
RAPGEF4-203ENST00000397087 LRRC9Q6ZRR7 1453 aa9.25□□□□□ -0.93
RAPGEF4-203ENST00000397087 IQGAP2Q13576 1575 aa9.25□□□□□ -0.93
RAPGEF4-203ENST00000397087 NESP48681 1621 aa9.24□□□□□ -0.93
RAPGEF4-203ENST00000397087 MAGI1Q96QZ7 1491 aaPredicted RBP9.24□□□□□ -0.93
RAPGEF4-203ENST00000397087 ACIN1Q9UKV3 1341 aaKnown RBP9.23□□□□□ -0.93
RAPGEF4-203ENST00000397087 SUPT6HQ7KZ85 1726 aaKnown RBP9.23□□□□□ -0.93
RAPGEF4-203ENST00000397087 AKNAQ7Z591 1439 aa9.22□□□□□ -0.93
RAPGEF4-203ENST00000397087 GCC2Q8IWJ2 1684 aa9.22□□□□□ -0.93
RAPGEF4-203ENST00000397087 TCOF1Q13428 1488 aaKnown RBP9.21□□□□□ -0.93
RAPGEF4-203ENST00000397087 EIF4G3O43432 1585 aaKnown RBP9.21□□□□□ -0.93
RAPGEF4-203ENST00000397087 RAD54L2Q9Y4B4 1467 aa9.2□□□□□ -0.94
RAPGEF4-203ENST00000397087 PPP4R3CPQ6ZMV5 832 aa9.2□□□□□ -0.94
RAPGEF4-203ENST00000397087 KIAA0556O60303 1618 aa9.19□□□□□ -0.94
RAPGEF4-203ENST00000397087 UBTFP17480 764 aaKnown RBP9.18□□□□□ -0.94
RAPGEF4-203ENST00000397087 KIAA0586Q9BVV6 1533 aa9.16□□□□□ -0.94
RAPGEF4-203ENST00000397087 SHROOM2Q13796 1616 aa9.16□□□□□ -0.94
RAPGEF4-203ENST00000397087 ITSN2Q9NZM3 1697 aa9.15□□□□□ -0.94
RAPGEF4-203ENST00000397087 MSH5O43196 834 aa9.14□□□□□ -0.95
RAPGEF4-203ENST00000397087 NUP160Q12769 1436 aa9.13□□□□□ -0.95
RAPGEF4-203ENST00000397087 CROCC2H7BZ55 1655 aa9.13□□□□□ -0.95
RAPGEF4-203ENST00000397087 CCNB3Q8WWL7 1395 aa9.12□□□□□ -0.95
RAPGEF4-203ENST00000397087 RAPGEF6Q8TEU7 1601 aa9.12□□□□□ -0.95
RAPGEF4-203ENST00000397087 SYNJ2O15056 1496 aa9.12□□□□□ -0.95
RAPGEF4-203ENST00000397087 MIA2Q96PC5 1412 aa9.12□□□□□ -0.95
RAPGEF4-203ENST00000397087 GRIN2AQ12879 1464 aa9.12□□□□□ -0.95
RAPGEF4-203ENST00000397087 ADGBQ8N7X0 1667 aa9.11□□□□□ -0.95
RAPGEF4-203ENST00000397087 DISP1Q96F81 1524 aa9.08□□□□□ -0.96
RAPGEF4-203ENST00000397087 PTPN23Q9H3S7 1636 aa9.08□□□□□ -0.96
RAPGEF4-203ENST00000397087 TIMELESSQ9UNS1 1208 aa9.08□□□□□ -0.96
RAPGEF4-203ENST00000397087 CEP170Q5SW79 1584 aa9.08□□□□□ -0.96
RAPGEF4-203ENST00000397087 ABCA8O94911 1581 aa9.07□□□□□ -0.96
RAPGEF4-203ENST00000397087 DNMT1P26358 1616 aaKnown RBP9.07□□□□□ -0.96
RAPGEF4-203ENST00000397087 MAPK8IP2Q13387 824 aaPredicted RBP9.07□□□□□ -0.96
RAPGEF4-203ENST00000397087 APLP2Q06481 763 aa9.06□□□□□ -0.96
RAPGEF4-203ENST00000397087 MYOM3Q5VTT5 1437 aa9.05□□□□□ -0.96
RAPGEF4-203ENST00000397087 MAPKBP1O60336 1514 aa9.05□□□□□ -0.96
RAPGEF4-203ENST00000397087 FGD6Q6ZV73 1430 aa9.05□□□□□ -0.96
RAPGEF4-203ENST00000397087 EPRSP07814 1512 aaKnown RBP9.05□□□□□ -0.96
RAPGEF4-203ENST00000397087 DHX57Q6P158 1386 aaKnown RBP9.05□□□□□ -0.96
RAPGEF4-203ENST00000397087 RANGAP1P46060 587 aaPredicted RBP9.05□□□□□ -0.96
RAPGEF4-203ENST00000397087 HFM1A2PYH4 1435 aa9.05□□□□□ -0.96
RAPGEF4-203ENST00000397087 SHANK2Q9UPX8 1470 aa9.03□□□□□ -0.96
RAPGEF4-203ENST00000397087 ROCK1Q13464 1354 aa9.03□□□□□ -0.96
RAPGEF4-203ENST00000397087 ADGRL2O95490 1459 aa9.02□□□□□ -0.97
RAPGEF4-203ENST00000397087 MAGI3Q5TCQ9 1506 aa9.02□□□□□ -0.97
RAPGEF4-203ENST00000397087 SETD5Q9C0A6 1442 aa9.02□□□□□ -0.97
RAPGEF4-203ENST00000397087 MAST1Q9Y2H9 1570 aa9.02□□□□□ -0.97
RAPGEF4-203ENST00000397087 NCOA2Q15596 1464 aa9.02□□□□□ -0.97
RAPGEF4-203ENST00000397087 ARHGEF5Q12774 1597 aa9.02□□□□□ -0.97
RAPGEF4-203ENST00000397087 FHOD3Q2V2M9 1422 aa9.02□□□□□ -0.97
RAPGEF4-203ENST00000397087 POLR1AO95602 1720 aaPredicted RBP9.01□□□□□ -0.97
RAPGEF4-203ENST00000397087 KDM5DQ9BY66 1539 aa9.01□□□□□ -0.97
RAPGEF4-203ENST00000397087 PHLDB1Q86UU1 1377 aa9□□□□□ -0.97
RAPGEF4-203ENST00000397087 ARAP3Q8WWN8 1544 aa8.99□□□□□ -0.97
RAPGEF4-203ENST00000397087 CLASP1Q7Z460 1538 aa8.98□□□□□ -0.97
RAPGEF4-203ENST00000397087 NUP153P49790 1475 aaKnown RBP8.97□□□□□ -0.97
RAPGEF4-203ENST00000397087 ZNF608Q9ULD9 1512 aaPredicted RBP8.97□□□□□ -0.97
RAPGEF4-203ENST00000397087 UACAQ9BZF9 1416 aa8.97□□□□□ -0.97
RAPGEF4-203ENST00000397087 UHRF1BP1LA0JNW5 1464 aa8.97□□□□□ -0.97
RAPGEF4-203ENST00000397087 ERCC6Q03468 1493 aa8.97□□□□□ -0.97
RAPGEF4-203ENST00000397087 CHD1O14646 1710 aa8.96□□□□□ -0.97
RAPGEF4-203ENST00000397087 TDRD9Q8NDG6 1382 aaKnown RBP8.96□□□□□ -0.97
RAPGEF4-203ENST00000397087 PREX2Q70Z35 1606 aa8.96□□□□□ -0.97
RAPGEF4-203ENST00000397087 NPM3O75607 178 aaKnown RBP8.96□□□□□ -0.98
RAPGEF4-203ENST00000397087 KIF14Q15058 1648 aa8.96□□□□□ -0.98
RAPGEF4-203ENST00000397087 CDC42BPAQ5VT25 1732 aa8.96□□□□□ -0.98
RAPGEF4-203ENST00000397087 KANK4Q5T7N3 995 aaPredicted RBP8.95□□□□□ -0.98
RAPGEF4-203ENST00000397087 CARMIL2Q6F5E8 1435 aa8.94□□□□□ -0.98
RAPGEF4-203ENST00000397087 PLXNC1O60486 1568 aa8.93□□□□□ -0.98
RAPGEF4-203ENST00000397087 CCER1Q8TC90 406 aaPredicted RBP8.93□□□□□ -0.98
RAPGEF4-203ENST00000397087 ABCC10Q5T3U5 1492 aa8.93□□□□□ -0.98
RAPGEF4-203ENST00000397087 KDM5BQ9UGL1 1544 aa8.93□□□□□ -0.98
RAPGEF4-203ENST00000397087 TROQ12816 1431 aaPredicted RBP8.93□□□□□ -0.98
RAPGEF4-203ENST00000397087 RAB3GAP2Q9H2M9 1393 aa8.92□□□□□ -0.98
RAPGEF4-203ENST00000397087 NAIPQ13075 1403 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 172.2 ms