RNA–Protein interactions for RNA: ENST00000397013.2

NUP98-206, Transcript of nucleoporin 98, humanhuman

TSL 5

Gene NUP98, Length 939 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-206ENST00000397013 MAGI1Q96QZ7 1491 aaPredicted RBP14.65□□□□□ -0.06
NUP98-206ENST00000397013 SYNJ2O15056 1496 aa14.64□□□□□ -0.07
NUP98-206ENST00000397013 FOXD4L1Q9NU39 408 aa14.64□□□□□ -0.07
NUP98-206ENST00000397013 ZBTB22O15209 634 aa14.63□□□□□ -0.07
NUP98-206ENST00000397013 SYNJ1O43426 1573 aa14.63□□□□□ -0.07
NUP98-206ENST00000397013 GAPVD1Q14C86 1478 aa14.63□□□□□ -0.07
NUP98-206ENST00000397013 SUPT5HO00267 1087 aaKnown RBP14.62□□□□□ -0.07
NUP98-206ENST00000397013 ERCC6L2Q5T890 1561 aa14.58□□□□□ -0.08
NUP98-206ENST00000397013 WDR97A6NE52 1622 aa14.56□□□□□ -0.08
NUP98-206ENST00000397013 ABCA10Q8WWZ4 1543 aa14.55□□□□□ -0.08
NUP98-206ENST00000397013 PBRM1Q86U86 1689 aa14.5□□□□□ -0.09
NUP98-206ENST00000397013 GRIN2AQ12879 1464 aa14.5□□□□□ -0.09
NUP98-206ENST00000397013 ABCA5Q8WWZ7 1642 aa14.49□□□□□ -0.09
NUP98-206ENST00000397013 WRNQ14191 1432 aaPredicted RBP eCLIP14.48□□□□□ -0.09
NUP98-206ENST00000397013 NUP160Q12769 1436 aa14.47□□□□□ -0.09
NUP98-206ENST00000397013 SLC4A2P04920 1241 aa14.46□□□□□ -0.09
NUP98-206ENST00000397013 CEP170Q5SW79 1584 aa14.46□□□□□ -0.09
NUP98-206ENST00000397013 JPH4Q96JJ6 628 aa14.43□□□□□ -0.1
NUP98-206ENST00000397013 FHAD1B1AJZ9 1412 aa14.42□□□□□ -0.1
NUP98-206ENST00000397013 ADAMTS12P58397 1594 aa14.41□□□□□ -0.1
NUP98-206ENST00000397013 PRG4Q92954 1404 aaPredicted RBP14.4□□□□□ -0.1
NUP98-206ENST00000397013 FAM69CQ0P6D2 419 aa14.36□□□□□ -0.11
NUP98-206ENST00000397013 TOP2BQ02880 1626 aa14.35□□□□□ -0.11
NUP98-206ENST00000397013 SHROOM2Q13796 1616 aa14.34□□□□□ -0.11
NUP98-206ENST00000397013 DCAF8L1A6NGE4 600 aa14.34□□□□□ -0.11
NUP98-206ENST00000397013 ERICH3Q5RHP9 1530 aa14.31□□□□□ -0.12
NUP98-206ENST00000397013 BIVM-ERCC5R4GMW8 1640 aa14.31□□□□□ -0.12
NUP98-206ENST00000397013 MYCNP04198 464 aaPredicted RBP14.3□□□□□ -0.12
NUP98-206ENST00000397013 NPM1P06748 294 aaKnown RBP eCLIP14.28□□□□□ -0.12
NUP98-206ENST00000397013 TTBK1Q5TCY1 1321 aaPredicted RBP14.28□□□□□ -0.12
NUP98-206ENST00000397013 IGF1RP08069 1367 aa14.26□□□□□ -0.13
NUP98-206ENST00000397013 KDM4FA0A1W2PPD8 638 aa14.25□□□□□ -0.13
NUP98-206ENST00000397013 ABCC10Q5T3U5 1492 aa14.25□□□□□ -0.13
NUP98-206ENST00000397013 KIF13AQ9H1H9 1805 aa14.24□□□□□ -0.13
NUP98-206ENST00000397013 ATXN8OSP0DMR3 200 aa14.23□□□□□ -0.13
NUP98-206ENST00000397013 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.22□□□□□ -0.132e-6■■■■□ 24.3
NUP98-206ENST00000397013 RUSC2Q8N2Y8 1516 aa14.2□□□□□ -0.14
NUP98-206ENST00000397013 ADCY10Q96PN6 1610 aa14.19□□□□□ -0.14
NUP98-206ENST00000397013 KIAA0586Q9BVV6 1533 aa14.17□□□□□ -0.14
NUP98-206ENST00000397013 DIP2BQ9P265 1576 aa14.16□□□□□ -0.14
NUP98-206ENST00000397013 MAPKBP1O60336 1514 aa14.15□□□□□ -0.14
NUP98-206ENST00000397013 PTPRGP23470 1445 aa14.15□□□□□ -0.14
NUP98-206ENST00000397013 KIF27Q86VH2 1401 aa14.13□□□□□ -0.15
NUP98-206ENST00000397013 CARMIL1Q5VZK9 1371 aa14.12□□□□□ -0.15
NUP98-206ENST00000397013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.1□□□□□ -0.15
NUP98-206ENST00000397013 HNRNPUL2Q1KMD3 747 aaKnown RBP14.1□□□□□ -0.15
NUP98-206ENST00000397013 TNIKQ9UKE5 1360 aa14.08□□□□□ -0.16
NUP98-206ENST00000397013 KDM6BO15054 1643 aa14.07□□□□□ -0.16
NUP98-206ENST00000397013 TSPOAP1O95153 1857 aa14.06□□□□□ -0.16
NUP98-206ENST00000397013 ASXL2Q76L83 1435 aa14.06□□□□□ -0.16
NUP98-206ENST00000397013 COL17A1Q9UMD9 1497 aaPredicted RBP14.05□□□□□ -0.16
NUP98-206ENST00000397013 ILDR1Q86SU0 546 aaPredicted RBP14.04□□□□□ -0.16
NUP98-206ENST00000397013 SAMD1Q6SPF0 538 aaPredicted RBP14.03□□□□□ -0.16
NUP98-206ENST00000397013 ABCC2Q92887 1545 aa14.03□□□□□ -0.16
NUP98-206ENST00000397013 CARMIL2Q6F5E8 1435 aa14.01□□□□□ -0.17
NUP98-206ENST00000397013 U3KPZ7 1027 aaPredicted RBP14.01□□□□□ -0.17
NUP98-206ENST00000397013 UACAQ9BZF9 1416 aa14□□□□□ -0.17
NUP98-206ENST00000397013 CUL7Q14999 1698 aa14□□□□□ -0.17
NUP98-206ENST00000397013 DISP1Q96F81 1524 aa14□□□□□ -0.17
NUP98-206ENST00000397013 PLB1Q6P1J6 1458 aa13.99□□□□□ -0.17
NUP98-206ENST00000397013 UHRF1BP1LA0JNW5 1464 aa13.96□□□□□ -0.17
NUP98-206ENST00000397013 EPRSP07814 1512 aaKnown RBP13.95□□□□□ -0.18
NUP98-206ENST00000397013 PPRC1Q5VV67 1664 aaKnown RBP13.95□□□□□ -0.18
NUP98-206ENST00000397013 IQGAP2Q13576 1575 aa13.95□□□□□ -0.18
NUP98-206ENST00000397013 ADGRL1O94910 1474 aa13.94□□□□□ -0.18
NUP98-206ENST00000397013 GLI2P10070 1586 aa13.94□□□□□ -0.18
NUP98-206ENST00000397013 KCNH8Q96L42 1107 aa13.93□□□□□ -0.18
NUP98-206ENST00000397013 KDM5BQ9UGL1 1544 aa13.92□□□□□ -0.18
NUP98-206ENST00000397013 RAPGEF2Q9Y4G8 1499 aa13.91□□□□□ -0.18
NUP98-206ENST00000397013 APLP2Q06481 763 aa13.9□□□□□ -0.18
NUP98-206ENST00000397013 ARID3CA6NKF2 412 aa13.89□□□□□ -0.19
NUP98-206ENST00000397013 UGGT2Q9NYU1 1516 aa13.88□□□□□ -0.19
NUP98-206ENST00000397013 P3H3Q8IVL6 736 aa13.85□□□□□ -0.19
NUP98-206ENST00000397013 ZCCHC11Q5TAX3 1644 aaKnown RBP13.85□□□□□ -0.19
NUP98-206ENST00000397013 MAP3K4Q9Y6R4 1608 aa13.84□□□□□ -0.19
NUP98-206ENST00000397013 KIAA0556O60303 1618 aa13.83□□□□□ -0.2
NUP98-206ENST00000397013 WDR7Q9Y4E6 1490 aa13.83□□□□□ -0.2
NUP98-206ENST00000397013 CD109Q6YHK3 1445 aa13.82□□□□□ -0.2
NUP98-206ENST00000397013 TEX14Q8IWB6 1497 aa13.82□□□□□ -0.2
NUP98-206ENST00000397013 HECW2Q9P2P5 1572 aa13.79□□□□□ -0.2
NUP98-206ENST00000397013 ATF5Q9Y2D1 282 aaPredicted RBP13.76□□□□□ -0.21
NUP98-206ENST00000397013 ABCA8O94911 1581 aa13.75□□□□□ -0.21
NUP98-206ENST00000397013 MAGI3Q5TCQ9 1506 aa13.75□□□□□ -0.21
NUP98-206ENST00000397013 RAPGEF3O95398 923 aa13.75□□□□□ -0.21
NUP98-206ENST00000397013 RNF39Q9H2S5 420 aa13.75□□□□□ -0.21
NUP98-206ENST00000397013 RANGAP1P46060 587 aaPredicted RBP13.73□□□□□ -0.21
NUP98-206ENST00000397013 ATP10BO94823 1461 aa13.73□□□□□ -0.21
NUP98-206ENST00000397013 PRXQ9BXM0 1461 aa13.73□□□□□ -0.21
NUP98-206ENST00000397013 GOLGA3Q08378 1498 aa13.72□□□□□ -0.21
NUP98-206ENST00000397013 C1QBPQ07021 282 aaKnown RBP13.67□□□□□ -0.22
NUP98-206ENST00000397013 ARAP3Q8WWN8 1544 aa13.65□□□□□ -0.22
NUP98-206ENST00000397013 KIF21BO75037 1637 aa13.65□□□□□ -0.22
NUP98-206ENST00000397013 CFAP43Q8NDM7 1665 aa13.65□□□□□ -0.22
NUP98-206ENST00000397013 ARID4BQ4LE39 1312 aaPredicted RBP13.64□□□□□ -0.23
NUP98-206ENST00000397013 CTTNBP2Q8WZ74 1663 aa13.63□□□□□ -0.23
NUP98-206ENST00000397013 PTPRMP28827 1452 aa13.62□□□□□ -0.23
NUP98-206ENST00000397013 ZNF219Q9P2Y4 722 aaPredicted RBP13.62□□□□□ -0.23
NUP98-206ENST00000397013 FBXO41Q8TF61 875 aa13.61□□□□□ -0.23
NUP98-206ENST00000397013 FAM9AQ8IZU1 332 aaPredicted RBP13.6□□□□□ -0.23
NUP98-206ENST00000397013 HSPA2P54652 639 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms