RNA–Protein interactions for RNA: ENST00000396859.5

GAPDH-204, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-204ENST00000396859 RIMBP3CA6NJZ7 1639 aa22.49■■□□□ 1.19
GAPDH-204ENST00000396859 RIMBP3BA6NNM3 1639 aa22.49■■□□□ 1.19
GAPDH-204ENST00000396859 KIF21BO75037 1637 aa22.49■■□□□ 1.19
GAPDH-204ENST00000396859 RIMBP3Q9UFD9 1639 aa22.49■■□□□ 1.19
GAPDH-204ENST00000396859 SHROOM2Q13796 1616 aa22.47■■□□□ 1.19
GAPDH-204ENST00000396859 JPH4Q96JJ6 628 aa22.47■■□□□ 1.19
GAPDH-204ENST00000396859 IQGAP2Q13576 1575 aa22.46■■□□□ 1.19
GAPDH-204ENST00000396859 CTTNBP2Q8WZ74 1663 aa22.46■■□□□ 1.19
GAPDH-204ENST00000396859 PRG4Q92954 1404 aaPredicted RBP22.41■■□□□ 1.18
GAPDH-204ENST00000396859 GOLGA3Q08378 1498 aa22.4■■□□□ 1.18
GAPDH-204ENST00000396859 EHMT2Q96KQ7 1210 aa22.37■■□□□ 1.17
GAPDH-204ENST00000396859 CARMIL2Q6F5E8 1435 aa22.35■■□□□ 1.17
GAPDH-204ENST00000396859 UBTFP17480 764 aaKnown RBP22.35■■□□□ 1.17
GAPDH-204ENST00000396859 ERCC6L2Q5T890 1561 aa22.33■■□□□ 1.17
GAPDH-204ENST00000396859 ARAP1Q96P48 1450 aa22.33■■□□□ 1.16
GAPDH-204ENST00000396859 UGGT2Q9NYU1 1516 aa22.32■■□□□ 1.16
GAPDH-204ENST00000396859 CYB5RLQ6IPT4 315 aa22.31■■□□□ 1.16
GAPDH-204ENST00000396859 DISP1Q96F81 1524 aa22.23■■□□□ 1.15
GAPDH-204ENST00000396859 KIAA0556O60303 1618 aa22.23■■□□□ 1.15
GAPDH-204ENST00000396859 TNIKQ9UKE5 1360 aa22.23■■□□□ 1.15
GAPDH-204ENST00000396859 RANGAP1P46060 587 aaPredicted RBP22.21■■□□□ 1.15
GAPDH-204ENST00000396859 TTBK1Q5TCY1 1321 aaPredicted RBP22.19■■□□□ 1.14
GAPDH-204ENST00000396859 PTPRGP23470 1445 aa22.19■■□□□ 1.14
GAPDH-204ENST00000396859 SAMD9Q5K651 1589 aa22.14■■□□□ 1.13
GAPDH-204ENST00000396859 EFCAB5A4FU69 1503 aa22.13■■□□□ 1.13
GAPDH-204ENST00000396859 P3H3Q8IVL6 736 aa22.12■■□□□ 1.13
GAPDH-204ENST00000396859 LOC105371045A0A1W2PR82 267 aa22.04■■□□□ 1.12
GAPDH-204ENST00000396859 NPM1P06748 294 aaKnown RBP eCLIP22.04■■□□□ 1.12
GAPDH-204ENST00000396859 UACAQ9BZF9 1416 aa22.04■■□□□ 1.12
GAPDH-204ENST00000396859 FHOD3Q2V2M9 1422 aa22.03■■□□□ 1.12
GAPDH-204ENST00000396859 ADCY10Q96PN6 1610 aa22.01■■□□□ 1.11
GAPDH-204ENST00000396859 ARHGAP35Q9NRY4 1499 aa22.01■■□□□ 1.11
GAPDH-204ENST00000396859 CLIP1P30622 1438 aa21.99■■□□□ 1.11
GAPDH-204ENST00000396859 UHRF1BP1LA0JNW5 1464 aa21.99■■□□□ 1.11
GAPDH-204ENST00000396859 ABCC2Q92887 1545 aa21.99■■□□□ 1.11
GAPDH-204ENST00000396859 PLB1Q6P1J6 1458 aa21.96■■□□□ 1.11
GAPDH-204ENST00000396859 ABCA8O94911 1581 aa21.95■■□□□ 1.11
GAPDH-204ENST00000396859 FMN1Q68DA7 1419 aa21.94■■□□□ 1.1
GAPDH-204ENST00000396859 CEP162Q5TB80 1403 aa21.93■■□□□ 1.1
GAPDH-204ENST00000396859 RAPGEF6Q8TEU7 1601 aa21.92■■□□□ 1.1
GAPDH-204ENST00000396859 KDM5BQ9UGL1 1544 aa21.87■■□□□ 1.09
GAPDH-204ENST00000396859 MAPKBP1O60336 1514 aa21.85■■□□□ 1.09
GAPDH-204ENST00000396859 ZCCHC11Q5TAX3 1644 aaKnown RBP21.85■■□□□ 1.09
GAPDH-204ENST00000396859 TRHP20396 242 aaPredicted RBP21.84■■□□□ 1.09
GAPDH-204ENST00000396859 ATP1B4Q9UN42 357 aaPredicted RBP21.84■■□□□ 1.09
GAPDH-204ENST00000396859 HECW1Q76N89 1606 aa21.81■■□□□ 1.08
GAPDH-204ENST00000396859 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.81■■□□□ 1.08
GAPDH-204ENST00000396859 HNRNPUL2Q1KMD3 747 aaKnown RBP21.81■■□□□ 1.08
GAPDH-204ENST00000396859 NUP153P49790 1475 aaKnown RBP21.8■■□□□ 1.08
GAPDH-204ENST00000396859 ARID3CA6NKF2 412 aa21.8■■□□□ 1.08
GAPDH-204ENST00000396859 ASXL2Q76L83 1435 aa21.78■■□□□ 1.08
GAPDH-204ENST00000396859 ATP10BO94823 1461 aa21.77■■□□□ 1.08
GAPDH-204ENST00000396859 PCF11O94913 1555 aaKnown RBP21.75■■□□□ 1.07
GAPDH-204ENST00000396859 CASKIN1Q8WXD9 1431 aa21.75■■□□□ 1.07
GAPDH-204ENST00000396859 FYCO1Q9BQS8 1478 aa21.73■■□□□ 1.07
GAPDH-204ENST00000396859 WDR7Q9Y4E6 1490 aa21.72■■□□□ 1.07
GAPDH-204ENST00000396859 ABCC10Q5T3U5 1492 aa21.71■■□□□ 1.07
GAPDH-204ENST00000396859 EPRSP07814 1512 aaKnown RBP21.7■■□□□ 1.07
GAPDH-204ENST00000396859 FAM69CQ0P6D2 419 aa21.69■■□□□ 1.06
GAPDH-204ENST00000396859 CCDC18Q5T9S5 1454 aa21.69■■□□□ 1.06
GAPDH-204ENST00000396859 DIP2BQ9P265 1576 aa21.69■■□□□ 1.06
GAPDH-204ENST00000396859 PLEKHD1A6NEE1 506 aa21.68■■□□□ 1.06
GAPDH-204ENST00000396859 CDK11AQ9UQ88 783 aaPredicted RBP21.68■■□□□ 1.06
GAPDH-204ENST00000396859 CDK13Q14004 1512 aaKnown RBP21.68■■□□□ 1.06
GAPDH-204ENST00000396859 VPS8Q8N3P4 1428 aa21.66■■□□□ 1.06
GAPDH-204ENST00000396859 KIF13AQ9H1H9 1805 aa21.66■■□□□ 1.06
GAPDH-204ENST00000396859 KCNH8Q96L42 1107 aa21.65■■□□□ 1.06
GAPDH-204ENST00000396859 GLI2P10070 1586 aa21.62■■□□□ 1.05
GAPDH-204ENST00000396859 LRRIQ1Q96JM4 1722 aa21.62■■□□□ 1.05
GAPDH-204ENST00000396859 TROQ12816 1431 aaPredicted RBP21.54■■□□□ 1.04
GAPDH-204ENST00000396859 CFAP43Q8NDM7 1665 aa21.53■■□□□ 1.04
GAPDH-204ENST00000396859 APLP2Q06481 763 aa21.53■■□□□ 1.04
GAPDH-204ENST00000396859 MAP3K4Q9Y6R4 1608 aa21.53■■□□□ 1.04
GAPDH-204ENST00000396859 TSPOAP1O95153 1857 aa21.52■■□□□ 1.04
GAPDH-204ENST00000396859 CD109Q6YHK3 1445 aa21.51■■□□□ 1.03
GAPDH-204ENST00000396859 KIF14Q15058 1648 aa21.51■■□□□ 1.03
GAPDH-204ENST00000396859 ABCA9Q8IUA7 1624 aa21.51■■□□□ 1.03
GAPDH-204ENST00000396859 MTUS2Q5JR59 1369 aa21.49■■□□□ 1.03
GAPDH-204ENST00000396859 TEX14Q8IWB6 1497 aa21.47■■□□□ 1.03
GAPDH-204ENST00000396859 TIAM1Q13009 1591 aa21.47■■□□□ 1.03
GAPDH-204ENST00000396859 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.45■■□□□ 1.021e-323■■■□□ 18.8
GAPDH-204ENST00000396859 MAGI3Q5TCQ9 1506 aa21.45■■□□□ 1.02
GAPDH-204ENST00000396859 EHBP1L1Q8N3D4 1523 aa21.45■■□□□ 1.02
GAPDH-204ENST00000396859 MAP3K1Q13233 1512 aa21.44■■□□□ 1.02
GAPDH-204ENST00000396859 TTC37Q6PGP7 1564 aa21.42■■□□□ 1.02
GAPDH-204ENST00000396859 PPRC1Q5VV67 1664 aaKnown RBP21.41■■□□□ 1.02
GAPDH-204ENST00000396859 MYO5CQ9NQX4 1742 aa21.38■■□□□ 1.01
GAPDH-204ENST00000396859 LRRC9Q6ZRR7 1453 aa21.37■■□□□ 1.01
GAPDH-204ENST00000396859 CFAP74Q9C0B2 1584 aa21.36■■□□□ 1.01
GAPDH-204ENST00000396859 SUPT6HQ7KZ85 1726 aaKnown RBP21.35■■□□□ 1.01
GAPDH-204ENST00000396859 PLCH2O75038 1416 aa21.34■■□□□ 1.01
GAPDH-204ENST00000396859 PHLDB1Q86UU1 1377 aa21.33■■□□□ 1
GAPDH-204ENST00000396859 KDM6BO15054 1643 aa21.33■■□□□ 1
GAPDH-204ENST00000396859 NEO1Q92859 1461 aa21.32■■□□□ 1
GAPDH-204ENST00000396859 ARAP3Q8WWN8 1544 aa21.32■■□□□ 1
GAPDH-204ENST00000396859 CCNB3Q8WWL7 1395 aa21.32■■□□□ 1
GAPDH-204ENST00000396859 FANCAO15360 1455 aa21.32■■□□□ 1
GAPDH-204ENST00000396859 ARHGAP5Q13017 1502 aa21.31■■□□□ 1
GAPDH-204ENST00000396859 EFCAB2Q5VUJ9 269 aa21.31■■□□□ 1
GAPDH-204ENST00000396859 KANK4Q5T7N3 995 aaPredicted RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms