RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 GOLGA3Q08378 1498 aa15.85■□□□□ 0.13
TUBB-208ENST00000396389 PBRM1Q86U86 1689 aa15.82■□□□□ 0.12
TUBB-208ENST00000396389 FHAD1B1AJZ9 1412 aa15.82■□□□□ 0.12
TUBB-208ENST00000396389 ERICH3Q5RHP9 1530 aa15.81■□□□□ 0.12
TUBB-208ENST00000396389 ATP1B4Q9UN42 357 aaPredicted RBP15.79■□□□□ 0.12
TUBB-208ENST00000396389 ACIN1Q9UKV3 1341 aaKnown RBP15.78■□□□□ 0.12
TUBB-208ENST00000396389 ARID3CA6NKF2 412 aa15.78■□□□□ 0.12
TUBB-208ENST00000396389 SYNJ2O15056 1496 aa15.76■□□□□ 0.11
TUBB-208ENST00000396389 ADAMTS12P58397 1594 aa15.76■□□□□ 0.11
TUBB-208ENST00000396389 GTF3C3Q9Y5Q9 886 aa15.76■□□□□ 0.11
TUBB-208ENST00000396389 MAGI1Q96QZ7 1491 aaPredicted RBP15.75■□□□□ 0.11
TUBB-208ENST00000396389 GRIN2AQ12879 1464 aa15.75■□□□□ 0.11
TUBB-208ENST00000396389 CEP162Q5TB80 1403 aa15.74■□□□□ 0.11
TUBB-208ENST00000396389 KIF21BO75037 1637 aa15.73■□□□□ 0.11
TUBB-208ENST00000396389 TNIKQ9UKE5 1360 aa15.73■□□□□ 0.11
TUBB-208ENST00000396389 CUL7Q14999 1698 aa15.71■□□□□ 0.11
TUBB-208ENST00000396389 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.7■□□□□ 0.1
TUBB-208ENST00000396389 OSCARQ8IYS5 282 aa15.7■□□□□ 0.1
TUBB-208ENST00000396389 CLIP1P30622 1438 aa15.69■□□□□ 0.1
TUBB-208ENST00000396389 JPH4Q96JJ6 628 aa15.69■□□□□ 0.1
TUBB-208ENST00000396389 CEP170Q5SW79 1584 aa15.66■□□□□ 0.1
TUBB-208ENST00000396389 CHD1O14646 1710 aa15.66■□□□□ 0.1
TUBB-208ENST00000396389 FHOD3Q2V2M9 1422 aa15.64■□□□□ 0.09
TUBB-208ENST00000396389 NUP160Q12769 1436 aa15.58■□□□□ 0.08
TUBB-208ENST00000396389 CCER1Q8TC90 406 aaPredicted RBP15.58■□□□□ 0.08
TUBB-208ENST00000396389 KIAA0586Q9BVV6 1533 aa15.58■□□□□ 0.08
TUBB-208ENST00000396389 ARHGAP35Q9NRY4 1499 aa15.57■□□□□ 0.08
TUBB-208ENST00000396389 PRG4Q92954 1404 aaPredicted RBP15.57■□□□□ 0.08
TUBB-208ENST00000396389 ARAP1Q96P48 1450 aa15.57■□□□□ 0.08
TUBB-208ENST00000396389 HNRNPUL2Q1KMD3 747 aaKnown RBP15.57■□□□□ 0.08
TUBB-208ENST00000396389 IQGAP2Q13576 1575 aa15.56■□□□□ 0.08
TUBB-208ENST00000396389 DIEXFQ68CQ4 756 aaKnown RBP15.56■□□□□ 0.08
TUBB-208ENST00000396389 PRKCSHP14314 528 aaPredicted RBP15.55■□□□□ 0.08
TUBB-208ENST00000396389 ERCC6L2Q5T890 1561 aa15.53■□□□□ 0.08
TUBB-208ENST00000396389 CYB5RLQ6IPT4 315 aa15.51■□□□□ 0.07
TUBB-208ENST00000396389 CTTNBP2Q8WZ74 1663 aa15.5■□□□□ 0.07
TUBB-208ENST00000396389 CENPBP07199 599 aaPredicted RBP15.5■□□□□ 0.07
TUBB-208ENST00000396389 YTHDC1Q96MU7 727 aaKnown RBP15.5■□□□□ 0.07
TUBB-208ENST00000396389 APLP2Q06481 763 aa15.49■□□□□ 0.07
TUBB-208ENST00000396389 DISP1Q96F81 1524 aa15.47■□□□□ 0.07
TUBB-208ENST00000396389 CARMIL2Q6F5E8 1435 aa15.45■□□□□ 0.06
TUBB-208ENST00000396389 PTPRGP23470 1445 aa15.43■□□□□ 0.06
TUBB-208ENST00000396389 PLB1Q6P1J6 1458 aa15.43■□□□□ 0.06
TUBB-208ENST00000396389 KANK4Q5T7N3 995 aaPredicted RBP15.43■□□□□ 0.06
TUBB-208ENST00000396389 VPS8Q8N3P4 1428 aa15.42■□□□□ 0.06
TUBB-208ENST00000396389 CLASP1Q7Z460 1538 aa15.41■□□□□ 0.06
TUBB-208ENST00000396389 UGGT2Q9NYU1 1516 aa15.4■□□□□ 0.06
TUBB-208ENST00000396389 KIAA0556O60303 1618 aa15.39■□□□□ 0.05
TUBB-208ENST00000396389 SAMD9Q5K651 1589 aa15.35■□□□□ 0.05
TUBB-208ENST00000396389 KCNH8Q96L42 1107 aa15.35■□□□□ 0.05
TUBB-208ENST00000396389 FMN1Q68DA7 1419 aa15.35■□□□□ 0.05
TUBB-208ENST00000396389 EFCAB5A4FU69 1503 aa15.35■□□□□ 0.05
TUBB-208ENST00000396389 PCF11O94913 1555 aaKnown RBP15.33■□□□□ 0.04
TUBB-208ENST00000396389 ARHGEF11O15085 1522 aa15.33■□□□□ 0.04
TUBB-208ENST00000396389 CDK13Q14004 1512 aaKnown RBP15.32■□□□□ 0.04
TUBB-208ENST00000396389 ERICH6Q7L0X2 663 aa15.28■□□□□ 0.04
TUBB-208ENST00000396389 SHROOM2Q13796 1616 aa15.28■□□□□ 0.04
TUBB-208ENST00000396389 ITGAEP38570 1179 aa15.27■□□□□ 0.03
TUBB-208ENST00000396389 CASKIN1Q8WXD9 1431 aa15.27■□□□□ 0.03
TUBB-208ENST00000396389 UACAQ9BZF9 1416 aa15.26■□□□□ 0.03
TUBB-208ENST00000396389 NUP153P49790 1475 aaKnown RBP15.26■□□□□ 0.03
TUBB-208ENST00000396389 MTUS2Q5JR59 1369 aa15.25■□□□□ 0.03
TUBB-208ENST00000396389 NPM1P06748 294 aaKnown RBP eCLIP15.25■□□□□ 0.03
TUBB-208ENST00000396389 MIER1Q8N108 512 aa15.23■□□□□ 0.03
TUBB-208ENST00000396389 RIMBP3CA6NJZ7 1639 aa15.23■□□□□ 0.03
TUBB-208ENST00000396389 RIMBP3BA6NNM3 1639 aa15.23■□□□□ 0.03
TUBB-208ENST00000396389 RIMBP3Q9UFD9 1639 aa15.23■□□□□ 0.03
TUBB-208ENST00000396389 PLEKHD1A6NEE1 506 aa15.22■□□□□ 0.03
TUBB-208ENST00000396389 DNAJC5Q9H3Z4 198 aa15.22■□□□□ 0.03
TUBB-208ENST00000396389 EPRSP07814 1512 aaKnown RBP15.22■□□□□ 0.03
TUBB-208ENST00000396389 FYCO1Q9BQS8 1478 aa15.21■□□□□ 0.03
TUBB-208ENST00000396389 ZNF316A6NFI3 1004 aaPredicted RBP15.2■□□□□ 0.02
TUBB-208ENST00000396389 ZNF777Q9ULD5 760 aaPredicted RBP15.2■□□□□ 0.02
TUBB-208ENST00000396389 ATP10BO94823 1461 aa15.2■□□□□ 0.02
TUBB-208ENST00000396389 RAPGEF6Q8TEU7 1601 aa15.2■□□□□ 0.02
TUBB-208ENST00000396389 CDK11AQ9UQ88 783 aaPredicted RBP15.18■□□□□ 0.02
TUBB-208ENST00000396389 FAM50AQ14320 339 aaKnown RBP15.17■□□□□ 0.02
TUBB-208ENST00000396389 MAGI3Q5TCQ9 1506 aa15.15■□□□□ 0.02
TUBB-208ENST00000396389 ABCA8O94911 1581 aa15.15■□□□□ 0.02
TUBB-208ENST00000396389 HECW1Q76N89 1606 aa15.15■□□□□ 0.02
TUBB-208ENST00000396389 LRRC9Q6ZRR7 1453 aa15.14■□□□□ 0.01
TUBB-208ENST00000396389 LRRIQ1Q96JM4 1722 aa15.14■□□□□ 0.01
TUBB-208ENST00000396389 TIAM1Q13009 1591 aa15.14■□□□□ 0.01
TUBB-208ENST00000396389 ABCC2Q92887 1545 aa15.14■□□□□ 0.01
TUBB-208ENST00000396389 ADCY10Q96PN6 1610 aa15.13■□□□□ 0.01
TUBB-208ENST00000396389 PHLDB1Q86UU1 1377 aa15.12■□□□□ 0.01
TUBB-208ENST00000396389 ZNF644Q9H582 1327 aaPredicted RBP15.11■□□□□ 0.01
TUBB-208ENST00000396389 TRHP20396 242 aaPredicted RBP15.11■□□□□ 0.01
TUBB-208ENST00000396389 CCDC18Q5T9S5 1454 aa15.08■□□□□ 0.01
TUBB-208ENST00000396389 ASXL2Q76L83 1435 aa15.07■□□□□ 0
TUBB-208ENST00000396389 FAM69CQ0P6D2 419 aa15.07■□□□□ 0
TUBB-208ENST00000396389 NCOA2Q15596 1464 aa15.06■□□□□ 0
TUBB-208ENST00000396389 CFDP1Q9UEE9 299 aaPredicted RBP15.06■□□□□ 0
TUBB-208ENST00000396389 CHIC2Q9UKJ5 165 aa15.05■□□□□ 0
TUBB-208ENST00000396389 TROQ12816 1431 aaPredicted RBP15.04■□□□□ -0
TUBB-208ENST00000396389 DAXXQ9UER7 740 aaPredicted RBP15.04■□□□□ -0
TUBB-208ENST00000396389 ZCCHC11Q5TAX3 1644 aaKnown RBP15.04■□□□□ -0
TUBB-208ENST00000396389 CCNB3Q8WWL7 1395 aa15.04■□□□□ -0
TUBB-208ENST00000396389 KDM5BQ9UGL1 1544 aa15.04■□□□□ -0
TUBB-208ENST00000396389 KIF14Q15058 1648 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms