RNA–Protein interactions for RNA: ENST00000396330.6

SNX16-203, Transcript of sorting nexin 16, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX16, Length 3,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16-203ENST00000396330 TOPBP1Q92547 1522 aa17.81■□□□□ 0.44
SNX16-203ENST00000396330 DHX57Q6P158 1386 aaKnown RBP17.8■□□□□ 0.44
SNX16-203ENST00000396330 FBLN2P98095 1184 aa17.8■□□□□ 0.44
SNX16-203ENST00000396330 FHAD1B1AJZ9 1412 aa17.77■□□□□ 0.44
SNX16-203ENST00000396330 MTUS2Q5JR59 1369 aa17.77■□□□□ 0.44
SNX16-203ENST00000396330 PDS5BQ9NTI5 1447 aa17.77■□□□□ 0.43
SNX16-203ENST00000396330 SIN3AQ96ST3 1273 aa17.77■□□□□ 0.43
SNX16-203ENST00000396330 RAB3GAP2Q9H2M9 1393 aa17.75■□□□□ 0.43
SNX16-203ENST00000396330 CHIC2Q9UKJ5 165 aa17.73■□□□□ 0.43
SNX16-203ENST00000396330 PHLDB1Q86UU1 1377 aa17.73■□□□□ 0.43
SNX16-203ENST00000396330 HIRIP3Q9BW71 556 aaPredicted RBP17.73■□□□□ 0.43
SNX16-203ENST00000396330 DNMBPQ6XZF7 1577 aa17.71■□□□□ 0.43
SNX16-203ENST00000396330 RRBP1Q9P2E9 1410 aaKnown RBP17.69■□□□□ 0.42
SNX16-203ENST00000396330 TRIM52Q96A61 297 aa17.67■□□□□ 0.42
SNX16-203ENST00000396330 URB2Q14146 1524 aaKnown RBP17.67■□□□□ 0.42
SNX16-203ENST00000396330 GAPVD1Q14C86 1478 aa17.67■□□□□ 0.42
SNX16-203ENST00000396330 LRRC9Q6ZRR7 1453 aa17.67■□□□□ 0.42
SNX16-203ENST00000396330 ABCA10Q8WWZ4 1543 aa17.66■□□□□ 0.42
SNX16-203ENST00000396330 CLSPNQ9HAW4 1339 aa17.66■□□□□ 0.42
SNX16-203ENST00000396330 PRDM2Q13029 1718 aa17.65■□□□□ 0.42
SNX16-203ENST00000396330 SETD5Q9C0A6 1442 aa17.64■□□□□ 0.41
SNX16-203ENST00000396330 RRP7BPQ9NSQ0 103 aa17.64■□□□□ 0.41
SNX16-203ENST00000396330 TIAM1Q13009 1591 aa17.63■□□□□ 0.41
SNX16-203ENST00000396330 AQRO60306 1485 aaKnown RBP eCLIP17.62■□□□□ 0.41
SNX16-203ENST00000396330 DDX10Q13206 875 aaKnown RBP17.6■□□□□ 0.41
SNX16-203ENST00000396330 FMN1Q68DA7 1419 aa17.6■□□□□ 0.41
SNX16-203ENST00000396330 PCF11O94913 1555 aaKnown RBP17.58■□□□□ 0.41
SNX16-203ENST00000396330 LAMC3Q9Y6N6 1575 aa17.57■□□□□ 0.4
SNX16-203ENST00000396330 CHMP7Q8WUX9 453 aaPredicted RBP17.55■□□□□ 0.4
SNX16-203ENST00000396330 ZNF777Q9ULD5 760 aaPredicted RBP17.54■□□□□ 0.4
SNX16-203ENST00000396330 CASKIN1Q8WXD9 1431 aa17.53■□□□□ 0.4
SNX16-203ENST00000396330 TONSLQ96HA7 1378 aa17.51■□□□□ 0.39
SNX16-203ENST00000396330 ERCC6Q03468 1493 aa17.51■□□□□ 0.39
SNX16-203ENST00000396330 FYCO1Q9BQS8 1478 aa17.48■□□□□ 0.39
SNX16-203ENST00000396330 FGD6Q6ZV73 1430 aa17.45■□□□□ 0.38
SNX16-203ENST00000396330 CUL7Q14999 1698 aa17.45■□□□□ 0.38
SNX16-203ENST00000396330 EFCAB5A4FU69 1503 aa17.45■□□□□ 0.38
SNX16-203ENST00000396330 CNGB1Q14028 1251 aaPredicted RBP17.45■□□□□ 0.38
SNX16-203ENST00000396330 KIF21AQ7Z4S6 1674 aa17.43■□□□□ 0.38
SNX16-203ENST00000396330 FOXD1Q16676 465 aa17.43■□□□□ 0.38
SNX16-203ENST00000396330 KCNH8Q96L42 1107 aa17.43■□□□□ 0.38
SNX16-203ENST00000396330 MAP3K1Q13233 1512 aa17.41■□□□□ 0.38
SNX16-203ENST00000396330 CDK11AQ9UQ88 783 aaPredicted RBP17.41■□□□□ 0.38
SNX16-203ENST00000396330 NCOA2Q15596 1464 aa17.4■□□□□ 0.38
SNX16-203ENST00000396330 ZNF608Q9ULD9 1512 aaPredicted RBP17.39■□□□□ 0.37
SNX16-203ENST00000396330 POLR3GLQ9BT43 218 aa17.38■□□□□ 0.37
SNX16-203ENST00000396330 MRC2Q9UBG0 1479 aa17.37■□□□□ 0.37
SNX16-203ENST00000396330 PPP1R15AO75807 674 aaPredicted RBP17.37■□□□□ 0.37
SNX16-203ENST00000396330 ZNF326Q5BKZ1 582 aaKnown RBP17.37■□□□□ 0.37
SNX16-203ENST00000396330 CTTNBP2Q8WZ74 1663 aa17.35■□□□□ 0.37
SNX16-203ENST00000396330 ANP32CO43423 234 aa17.35■□□□□ 0.37
SNX16-203ENST00000396330 MYOM3Q5VTT5 1437 aa17.35■□□□□ 0.37
SNX16-203ENST00000396330 CCDC18Q5T9S5 1454 aa17.35■□□□□ 0.37
SNX16-203ENST00000396330 ZNF644Q9H582 1327 aaPredicted RBP17.34■□□□□ 0.37
SNX16-203ENST00000396330 GRIN2BQ13224 1484 aa17.34■□□□□ 0.37
SNX16-203ENST00000396330 MAPKBP1O60336 1514 aa17.33■□□□□ 0.37
SNX16-203ENST00000396330 CFDP1Q9UEE9 299 aaPredicted RBP17.32■□□□□ 0.36
SNX16-203ENST00000396330 PTPRKQ15262 1439 aa17.31■□□□□ 0.36
SNX16-203ENST00000396330 SNAPC4Q5SXM2 1469 aa17.31■□□□□ 0.36
SNX16-203ENST00000396330 ABCA5Q8WWZ7 1642 aa17.31■□□□□ 0.36
SNX16-203ENST00000396330 CDK13Q14004 1512 aaKnown RBP17.31■□□□□ 0.36
SNX16-203ENST00000396330 BCANQ96GW7 911 aa17.31■□□□□ 0.36
SNX16-203ENST00000396330 CFAP43Q8NDM7 1665 aa17.3■□□□□ 0.36
SNX16-203ENST00000396330 SLC4A1APQ9BWU0 796 aaKnown RBP17.3■□□□□ 0.36
SNX16-203ENST00000396330 WDR97A6NE52 1622 aa17.3■□□□□ 0.36
SNX16-203ENST00000396330 PELP1Q8IZL8 1130 aaKnown RBP17.29■□□□□ 0.36
SNX16-203ENST00000396330 JPH4Q96JJ6 628 aa17.27■□□□□ 0.36
SNX16-203ENST00000396330 MPHOSPH9Q99550 1183 aa17.26■□□□□ 0.35
SNX16-203ENST00000396330 IQGAP2Q13576 1575 aa17.25■□□□□ 0.35
SNX16-203ENST00000396330 TIMELESSQ9UNS1 1208 aa17.25■□□□□ 0.35
SNX16-203ENST00000396330 IFT140Q96RY7 1462 aa17.24■□□□□ 0.35
SNX16-203ENST00000396330 PLEKHD1A6NEE1 506 aa17.24■□□□□ 0.35
SNX16-203ENST00000396330 EPRSP07814 1512 aaKnown RBP17.23■□□□□ 0.35
SNX16-203ENST00000396330 TARBP1Q13395 1621 aaKnown RBP17.23■□□□□ 0.35
SNX16-203ENST00000396330 NAIPQ13075 1403 aa17.23■□□□□ 0.35
SNX16-203ENST00000396330 HFM1A2PYH4 1435 aa17.22■□□□□ 0.35
SNX16-203ENST00000396330 UACAQ9BZF9 1416 aa17.22■□□□□ 0.35
SNX16-203ENST00000396330 EHBP1L1Q8N3D4 1523 aa17.21■□□□□ 0.34
SNX16-203ENST00000396330 SUPT6HQ7KZ85 1726 aaKnown RBP17.2■□□□□ 0.34
SNX16-203ENST00000396330 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.2■□□□□ 0.34
SNX16-203ENST00000396330 L3MBTL2Q969R5 705 aa17.18■□□□□ 0.34
SNX16-203ENST00000396330 SAMD9Q5K651 1589 aa17.18■□□□□ 0.34
SNX16-203ENST00000396330 NEFLP07196 543 aa17.17■□□□□ 0.34
SNX16-203ENST00000396330 HSPA5P11021 654 aaKnown RBP17.17■□□□□ 0.34
SNX16-203ENST00000396330 EIF4G2P78344 907 aaKnown RBP eCLIP17.17■□□□□ 0.34
SNX16-203ENST00000396330 MAGI3Q5TCQ9 1506 aa17.16■□□□□ 0.34
SNX16-203ENST00000396330 PTPN23Q9H3S7 1636 aa17.16■□□□□ 0.34
SNX16-203ENST00000396330 PRG4Q92954 1404 aaPredicted RBP17.16■□□□□ 0.34
SNX16-203ENST00000396330 HECW1Q76N89 1606 aa17.15■□□□□ 0.34
SNX16-203ENST00000396330 PBRM1Q86U86 1689 aa17.15■□□□□ 0.34
SNX16-203ENST00000396330 ADAMTS12P58397 1594 aa17.15■□□□□ 0.34
SNX16-203ENST00000396330 THOC2Q8NI27 1593 aaKnown RBP17.15■□□□□ 0.34
SNX16-203ENST00000396330 KIAA0586Q9BVV6 1533 aa17.14■□□□□ 0.34
SNX16-203ENST00000396330 TSPY4P0CV99 314 aa17.14■□□□□ 0.33
SNX16-203ENST00000396330 TSPY10P0CW01 314 aa17.14■□□□□ 0.33
SNX16-203ENST00000396330 CARMIL2Q6F5E8 1435 aa17.13■□□□□ 0.33
SNX16-203ENST00000396330 KDM2AQ9Y2K7 1162 aa17.13■□□□□ 0.33
SNX16-203ENST00000396330 GRIN2AQ12879 1464 aa17.13■□□□□ 0.33
SNX16-203ENST00000396330 FKBP8Q14318 412 aa17.12■□□□□ 0.33
SNX16-203ENST00000396330 PLB1Q6P1J6 1458 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms