RNA–Protein interactions for RNA: ENST00000395972.2

RAB5CP1-201, Transcript of RAB5C, member RAS oncogene family pseudogene 1, humanhuman

BASIC

Gene RAB5CP1, Length 580 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP1-201ENST00000395972 TOPBP1Q92547 1522 aa12.89□□□□□ -0.35
RAB5CP1-201ENST00000395972 SYNJ1O43426 1573 aa12.88□□□□□ -0.35
RAB5CP1-201ENST00000395972 HOXD11P31277 338 aaPredicted RBP12.86□□□□□ -0.35
RAB5CP1-201ENST00000395972 FAM69CQ0P6D2 419 aa12.86□□□□□ -0.35
RAB5CP1-201ENST00000395972 FKBP8Q14318 412 aa12.85□□□□□ -0.35
RAB5CP1-201ENST00000395972 SNAPC4Q5SXM2 1469 aa12.84□□□□□ -0.35
RAB5CP1-201ENST00000395972 TDRD9Q8NDG6 1382 aaKnown RBP12.82□□□□□ -0.36
RAB5CP1-201ENST00000395972 DISP3Q9P2K9 1392 aa12.82□□□□□ -0.36
RAB5CP1-201ENST00000395972 SYNJ2O15056 1496 aa12.82□□□□□ -0.36
RAB5CP1-201ENST00000395972 WIZO95785 1651 aa12.81□□□□□ -0.36
RAB5CP1-201ENST00000395972 ADGRL1O94910 1474 aa12.8□□□□□ -0.36
RAB5CP1-201ENST00000395972 KIF13AQ9H1H9 1805 aa12.8□□□□□ -0.36
RAB5CP1-201ENST00000395972 KDM6BO15054 1643 aa12.79□□□□□ -0.36
RAB5CP1-201ENST00000395972 TARBP1Q13395 1621 aaKnown RBP12.79□□□□□ -0.36
RAB5CP1-201ENST00000395972 ABCC8Q09428 1581 aa12.77□□□□□ -0.36
RAB5CP1-201ENST00000395972 MYCNP04198 464 aaPredicted RBP12.75□□□□□ -0.37
RAB5CP1-201ENST00000395972 RAD54L2Q9Y4B4 1467 aa12.73□□□□□ -0.37
RAB5CP1-201ENST00000395972 DNMBPQ6XZF7 1577 aa12.72□□□□□ -0.37
RAB5CP1-201ENST00000395972 SLC4A2P04920 1241 aa12.71□□□□□ -0.37
RAB5CP1-201ENST00000395972 ABCC10Q5T3U5 1492 aa12.71□□□□□ -0.38
RAB5CP1-201ENST00000395972 MAGI1Q96QZ7 1491 aaPredicted RBP12.71□□□□□ -0.38
RAB5CP1-201ENST00000395972 POLA1P09884 1462 aaPredicted RBP12.7□□□□□ -0.38
RAB5CP1-201ENST00000395972 NPM1P06748 294 aaKnown RBP eCLIP12.69□□□□□ -0.38
RAB5CP1-201ENST00000395972 SOGA1O94964 1423 aa12.69□□□□□ -0.38
RAB5CP1-201ENST00000395972 RNF39Q9H2S5 420 aa12.66□□□□□ -0.38
RAB5CP1-201ENST00000395972 GRIN2BQ13224 1484 aa12.64□□□□□ -0.39
RAB5CP1-201ENST00000395972 PRDM2Q13029 1718 aa12.63□□□□□ -0.39
RAB5CP1-201ENST00000395972 DIP2BQ9P265 1576 aa12.6□□□□□ -0.39
RAB5CP1-201ENST00000395972 CEP170Q5SW79 1584 aa12.6□□□□□ -0.39
RAB5CP1-201ENST00000395972 TOP2AP11388 1531 aaKnown RBP12.57□□□□□ -0.4
RAB5CP1-201ENST00000395972 TSPOAP1O95153 1857 aa12.56□□□□□ -0.4
RAB5CP1-201ENST00000395972 MAPKBP1O60336 1514 aa12.53□□□□□ -0.4
RAB5CP1-201ENST00000395972 WDR97A6NE52 1622 aa12.53□□□□□ -0.4
RAB5CP1-201ENST00000395972 CCDC88BA6NC98 1476 aa12.5□□□□□ -0.41
RAB5CP1-201ENST00000395972 FGD5Q6ZNL6 1462 aa12.5□□□□□ -0.41
RAB5CP1-201ENST00000395972 CERKQ8TCT0 537 aa12.49□□□□□ -0.41
RAB5CP1-201ENST00000395972 SPATA31D1Q6ZQQ2 1576 aa12.48□□□□□ -0.41
RAB5CP1-201ENST00000395972 PRG4Q92954 1404 aaPredicted RBP12.48□□□□□ -0.41
RAB5CP1-201ENST00000395972 C1QBPQ07021 282 aaKnown RBP12.47□□□□□ -0.41
RAB5CP1-201ENST00000395972 GRIN2AQ12879 1464 aa12.46□□□□□ -0.41
RAB5CP1-201ENST00000395972 NUP160Q12769 1436 aa12.45□□□□□ -0.42
RAB5CP1-201ENST00000395972 TOP2BQ02880 1626 aa12.44□□□□□ -0.42
RAB5CP1-201ENST00000395972 COL17A1Q9UMD9 1497 aaPredicted RBP12.43□□□□□ -0.42
RAB5CP1-201ENST00000395972 SHROOM2Q13796 1616 aa12.43□□□□□ -0.42
RAB5CP1-201ENST00000395972 JPH4Q96JJ6 628 aa12.42□□□□□ -0.42
RAB5CP1-201ENST00000395972 PBRM1Q86U86 1689 aa12.42□□□□□ -0.42
RAB5CP1-201ENST00000395972 ADCY10Q96PN6 1610 aa12.38□□□□□ -0.43
RAB5CP1-201ENST00000395972 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.38□□□□□ -0.43
RAB5CP1-201ENST00000395972 HSPA2P54652 639 aa12.31□□□□□ -0.44
RAB5CP1-201ENST00000395972 PPRC1Q5VV67 1664 aaKnown RBP12.31□□□□□ -0.44
RAB5CP1-201ENST00000395972 TTBK1Q5TCY1 1321 aaPredicted RBP12.31□□□□□ -0.44
RAB5CP1-201ENST00000395972 CUX1P39880 1505 aa12.31□□□□□ -0.44
RAB5CP1-201ENST00000395972 PLCB2Q00722 1185 aa12.3□□□□□ -0.44
RAB5CP1-201ENST00000395972 PTPRMP28827 1452 aa12.29□□□□□ -0.44
RAB5CP1-201ENST00000395972 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.29□□□□□ -0.44
RAB5CP1-201ENST00000395972 HNRNPUL2Q1KMD3 747 aaKnown RBP12.29□□□□□ -0.44
RAB5CP1-201ENST00000395972 PCF11O94913 1555 aaKnown RBP12.29□□□□□ -0.44
RAB5CP1-201ENST00000395972 ADAMTS12P58397 1594 aa12.29□□□□□ -0.44
RAB5CP1-201ENST00000395972 ABCA5Q8WWZ7 1642 aa12.28□□□□□ -0.44
RAB5CP1-201ENST00000395972 FHAD1B1AJZ9 1412 aa12.28□□□□□ -0.44
RAB5CP1-201ENST00000395972 FBXO3Q9UK99 471 aa12.27□□□□□ -0.45
RAB5CP1-201ENST00000395972 ASXL2Q76L83 1435 aa12.27□□□□□ -0.45
RAB5CP1-201ENST00000395972 TEX14Q8IWB6 1497 aa12.26□□□□□ -0.45
RAB5CP1-201ENST00000395972 ABCA10Q8WWZ4 1543 aa12.26□□□□□ -0.45
RAB5CP1-201ENST00000395972 SAMD1Q6SPF0 538 aaPredicted RBP12.25□□□□□ -0.45
RAB5CP1-201ENST00000395972 GLI2P10070 1586 aa12.25□□□□□ -0.45
RAB5CP1-201ENST00000395972 PLB1Q6P1J6 1458 aa12.24□□□□□ -0.45
RAB5CP1-201ENST00000395972 KIF21BO75037 1637 aa12.19□□□□□ -0.46
RAB5CP1-201ENST00000395972 ATF5Q9Y2D1 282 aaPredicted RBP12.18□□□□□ -0.46
RAB5CP1-201ENST00000395972 ABCC2Q92887 1545 aa12.17□□□□□ -0.46
RAB5CP1-201ENST00000395972 PTPRGP23470 1445 aa12.17□□□□□ -0.46
RAB5CP1-201ENST00000395972 EPRSP07814 1512 aaKnown RBP12.16□□□□□ -0.46
RAB5CP1-201ENST00000395972 ARID4BQ4LE39 1312 aaPredicted RBP12.14□□□□□ -0.47
RAB5CP1-201ENST00000395972 BCANQ96GW7 911 aa12.14□□□□□ -0.47
RAB5CP1-201ENST00000395972 MAP3K4Q9Y6R4 1608 aa12.14□□□□□ -0.47
RAB5CP1-201ENST00000395972 RUSC2Q8N2Y8 1516 aa12.13□□□□□ -0.47
RAB5CP1-201ENST00000395972 ADAMTSL3P82987 1691 aa12.11□□□□□ -0.47
RAB5CP1-201ENST00000395972 HAP1P54257 671 aaPredicted RBP12.09□□□□□ -0.47
RAB5CP1-201ENST00000395972 KIAA0586Q9BVV6 1533 aa12.08□□□□□ -0.48
RAB5CP1-201ENST00000395972 WRNQ14191 1432 aaPredicted RBP eCLIP12.07□□□□□ -0.48
RAB5CP1-201ENST00000395972 ERICH3Q5RHP9 1530 aa12.06□□□□□ -0.48
RAB5CP1-201ENST00000395972 MADDQ8WXG6 1647 aa12.06□□□□□ -0.48
RAB5CP1-201ENST00000395972 CUL7Q14999 1698 aa12.06□□□□□ -0.48
RAB5CP1-201ENST00000395972 TNIKQ9UKE5 1360 aa12.04□□□□□ -0.48
RAB5CP1-201ENST00000395972 CD109Q6YHK3 1445 aa12.03□□□□□ -0.48
RAB5CP1-201ENST00000395972 U3KPZ7 1027 aaPredicted RBP12.03□□□□□ -0.48
RAB5CP1-201ENST00000395972 VSIG10Q8N0Z9 540 aa12.02□□□□□ -0.49
RAB5CP1-201ENST00000395972 KCNH8Q96L42 1107 aa12.02□□□□□ -0.49
RAB5CP1-201ENST00000395972 UACAQ9BZF9 1416 aa12.01□□□□□ -0.49
RAB5CP1-201ENST00000395972 UHRF1BP1LA0JNW5 1464 aa12□□□□□ -0.49
RAB5CP1-201ENST00000395972 MAGI3Q5TCQ9 1506 aa12□□□□□ -0.49
RAB5CP1-201ENST00000395972 SPDYE4A6NLX3 237 aa11.99□□□□□ -0.49
RAB5CP1-201ENST00000395972 UBAP1LF5GYI3 381 aa11.99□□□□□ -0.49
RAB5CP1-201ENST00000395972 VASPP50552 380 aaPredicted RBP11.99□□□□□ -0.49
RAB5CP1-201ENST00000395972 BCORL1Q5H9F3 1711 aa11.98□□□□□ -0.49
RAB5CP1-201ENST00000395972 RIMS1Q86UR5 1692 aaKnown RBP11.98□□□□□ -0.49
RAB5CP1-201ENST00000395972 CARMIL2Q6F5E8 1435 aa11.98□□□□□ -0.49
RAB5CP1-201ENST00000395972 YEATS2Q9ULM3 1422 aa11.98□□□□□ -0.49
RAB5CP1-201ENST00000395972 APLP2Q06481 763 aa11.98□□□□□ -0.49
RAB5CP1-201ENST00000395972 ZNF219Q9P2Y4 722 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms