RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 SNAPC4Q5SXM2 1469 aa13.33□□□□□ -0.27
MSH5-205ENST00000395853 TDRD9Q8NDG6 1382 aaKnown RBP13.32□□□□□ -0.28
MSH5-205ENST00000395853 GRIN2BQ13224 1484 aa13.31□□□□□ -0.28
MSH5-205ENST00000395853 TRIM26Q12899 539 aaPredicted RBP13.3□□□□□ -0.28
MSH5-205ENST00000395853 CHMP7Q8WUX9 453 aaPredicted RBP13.3□□□□□ -0.28
MSH5-205ENST00000395853 FGD5Q6ZNL6 1462 aa13.3□□□□□ -0.28
MSH5-205ENST00000395853 SYNJ2O15056 1496 aa13.29□□□□□ -0.28
MSH5-205ENST00000395853 LOC105371045A0A1W2PR82 267 aa13.26□□□□□ -0.29
MSH5-205ENST00000395853 PLEKHG5O94827 1062 aa13.26□□□□□ -0.29
MSH5-205ENST00000395853 CUX1P39880 1505 aa13.25□□□□□ -0.29
MSH5-205ENST00000395853 GAPVD1Q14C86 1478 aa13.23□□□□□ -0.29
MSH5-205ENST00000395853 PBRM1Q86U86 1689 aa13.21□□□□□ -0.29
MSH5-205ENST00000395853 ABCA10Q8WWZ4 1543 aa13.18□□□□□ -0.3
MSH5-205ENST00000395853 TSHZ2Q9NRE2 1034 aa13.17□□□□□ -0.3
MSH5-205ENST00000395853 ABCA5Q8WWZ7 1642 aa13.17□□□□□ -0.3
MSH5-205ENST00000395853 DIEXFQ68CQ4 756 aaKnown RBP13.13□□□□□ -0.31
MSH5-205ENST00000395853 PODXL2Q9NZ53 605 aa13.13□□□□□ -0.31
MSH5-205ENST00000395853 GRIN2AQ12879 1464 aa13.12□□□□□ -0.31
MSH5-205ENST00000395853 NUP160Q12769 1436 aa13.12□□□□□ -0.31
MSH5-205ENST00000395853 PKNOX2Q96KN3 472 aa13.12□□□□□ -0.31
MSH5-205ENST00000395853 SALL2Q9Y467 1007 aaPredicted RBP13.1□□□□□ -0.31
MSH5-205ENST00000395853 SHROOM2Q13796 1616 aa13.09□□□□□ -0.31
MSH5-205ENST00000395853 CEP170Q5SW79 1584 aa13.09□□□□□ -0.31
MSH5-205ENST00000395853 ADAMTS12P58397 1594 aa13.08□□□□□ -0.32
MSH5-205ENST00000395853 ERCC6L2Q5T890 1561 aa13.06□□□□□ -0.32
MSH5-205ENST00000395853 WRNQ14191 1432 aaPredicted RBP eCLIP13.06□□□□□ -0.32
MSH5-205ENST00000395853 FHAD1B1AJZ9 1412 aa13.06□□□□□ -0.32
MSH5-205ENST00000395853 ERICH6BQ5W0A0 696 aa13.04□□□□□ -0.32
MSH5-205ENST00000395853 CCDC136Q96JN2 1154 aa13.04□□□□□ -0.32
MSH5-205ENST00000395853 ERICH3Q5RHP9 1530 aa13.03□□□□□ -0.32
MSH5-205ENST00000395853 CLSPNQ9HAW4 1339 aa13.02□□□□□ -0.33
MSH5-205ENST00000395853 BIVM-ERCC5R4GMW8 1640 aa13.01□□□□□ -0.33
MSH5-205ENST00000395853 KIF13AQ9H1H9 1805 aa13.01□□□□□ -0.33
MSH5-205ENST00000395853 EHMT2Q96KQ7 1210 aa13□□□□□ -0.33
MSH5-205ENST00000395853 TOP2BQ02880 1626 aa13□□□□□ -0.33
MSH5-205ENST00000395853 MYT1LQ9UL68 1186 aa12.99□□□□□ -0.33
MSH5-205ENST00000395853 YTHDC1Q96MU7 727 aaKnown RBP12.97□□□□□ -0.33
MSH5-205ENST00000395853 PRG4Q92954 1404 aaPredicted RBP12.96□□□□□ -0.34
MSH5-205ENST00000395853 SUPT16HQ9Y5B9 1047 aaKnown RBP12.95□□□□□ -0.34
MSH5-205ENST00000395853 ABCC10Q5T3U5 1492 aa12.95□□□□□ -0.34
MSH5-205ENST00000395853 MAPKBP1O60336 1514 aa12.94□□□□□ -0.34
MSH5-205ENST00000395853 JPH4Q96JJ6 628 aa12.94□□□□□ -0.34
MSH5-205ENST00000395853 NPM1P06748 294 aaKnown RBP eCLIP12.91□□□□□ -0.34
MSH5-205ENST00000395853 RUSC2Q8N2Y8 1516 aa12.9□□□□□ -0.34
MSH5-205ENST00000395853 FAM69CQ0P6D2 419 aa12.89□□□□□ -0.35
MSH5-205ENST00000395853 DIP2BQ9P265 1576 aa12.89□□□□□ -0.35
MSH5-205ENST00000395853 DEKP35659 375 aaKnown RBP12.87□□□□□ -0.35
MSH5-205ENST00000395853 ADCY10Q96PN6 1610 aa12.85□□□□□ -0.35
MSH5-205ENST00000395853 KDM6BO15054 1643 aa12.84□□□□□ -0.35
MSH5-205ENST00000395853 KIAA0586Q9BVV6 1533 aa12.83□□□□□ -0.35
MSH5-205ENST00000395853 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.81□□□□□ -0.36
MSH5-205ENST00000395853 KDM4FA0A1W2PPD8 638 aa12.79□□□□□ -0.36
MSH5-205ENST00000395853 CUL7Q14999 1698 aa12.78□□□□□ -0.36
MSH5-205ENST00000395853 RBM19Q9Y4C8 960 aaKnown RBP12.77□□□□□ -0.36
MSH5-205ENST00000395853 NEFLP07196 543 aa12.76□□□□□ -0.37
MSH5-205ENST00000395853 GLI2P10070 1586 aa12.75□□□□□ -0.37
MSH5-205ENST00000395853 IGF1RP08069 1367 aa12.75□□□□□ -0.37
MSH5-205ENST00000395853 KIF27Q86VH2 1401 aa12.74□□□□□ -0.37
MSH5-205ENST00000395853 TSPOAP1O95153 1857 aa12.74□□□□□ -0.37
MSH5-205ENST00000395853 PTPRGP23470 1445 aa12.74□□□□□ -0.37
MSH5-205ENST00000395853 PLB1Q6P1J6 1458 aa12.73□□□□□ -0.37
MSH5-205ENST00000395853 MSH5O43196 834 aa12.73□□□□□ -0.37
MSH5-205ENST00000395853 ABCC2Q92887 1545 aa12.73□□□□□ -0.37
MSH5-205ENST00000395853 PHF23Q9BUL5 403 aaPredicted RBP12.72□□□□□ -0.37
MSH5-205ENST00000395853 CARMIL2Q6F5E8 1435 aa12.72□□□□□ -0.37
MSH5-205ENST00000395853 UHRF1BP1LA0JNW5 1464 aa12.72□□□□□ -0.37
MSH5-205ENST00000395853 TNIKQ9UKE5 1360 aa12.71□□□□□ -0.37
MSH5-205ENST00000395853 EEA1Q15075 1411 aa12.71□□□□□ -0.38
MSH5-205ENST00000395853 PPRC1Q5VV67 1664 aaKnown RBP12.68□□□□□ -0.38
MSH5-205ENST00000395853 ASXL2Q76L83 1435 aa12.68□□□□□ -0.38
MSH5-205ENST00000395853 CARMIL1Q5VZK9 1371 aa12.66□□□□□ -0.38
MSH5-205ENST00000395853 ILDR1Q86SU0 546 aaPredicted RBP12.66□□□□□ -0.38
MSH5-205ENST00000395853 ADGRL1O94910 1474 aa12.65□□□□□ -0.38
MSH5-205ENST00000395853 IQGAP2Q13576 1575 aa12.65□□□□□ -0.38
MSH5-205ENST00000395853 MIER1Q8N108 512 aa12.65□□□□□ -0.38
MSH5-205ENST00000395853 UACAQ9BZF9 1416 aa12.65□□□□□ -0.38
MSH5-205ENST00000395853 TEX14Q8IWB6 1497 aa12.64□□□□□ -0.39
MSH5-205ENST00000395853 UBTFP17480 764 aaKnown RBP12.64□□□□□ -0.39
MSH5-205ENST00000395853 KDM5BQ9UGL1 1544 aa12.63□□□□□ -0.39
MSH5-205ENST00000395853 CEP162Q5TB80 1403 aa12.63□□□□□ -0.39
MSH5-205ENST00000395853 MAP3K4Q9Y6R4 1608 aa12.63□□□□□ -0.39
MSH5-205ENST00000395853 PDE4CQ08493 712 aa12.63□□□□□ -0.39
MSH5-205ENST00000395853 ZNF316A6NFI3 1004 aaPredicted RBP12.62□□□□□ -0.39
MSH5-205ENST00000395853 EPRSP07814 1512 aaKnown RBP12.62□□□□□ -0.39
MSH5-205ENST00000395853 CCER1Q8TC90 406 aaPredicted RBP12.61□□□□□ -0.39
MSH5-205ENST00000395853 GOLGA3Q08378 1498 aa12.61□□□□□ -0.39
MSH5-205ENST00000395853 PDIA4P13667 645 aaKnown RBP12.61□□□□□ -0.39
MSH5-205ENST00000395853 GLIPR1L2Q4G1C9 344 aa12.61□□□□□ -0.39
MSH5-205ENST00000395853 FANCIQ9NVI1 1328 aa12.6□□□□□ -0.39
MSH5-205ENST00000395853 DISP1Q96F81 1524 aa12.6□□□□□ -0.39
MSH5-205ENST00000395853 IL27Q8NEV9 243 aa12.6□□□□□ -0.39
MSH5-205ENST00000395853 UGGT2Q9NYU1 1516 aa12.59□□□□□ -0.39
MSH5-205ENST00000395853 COL17A1Q9UMD9 1497 aaPredicted RBP12.58□□□□□ -0.4
MSH5-205ENST00000395853 RTN4Q9NQC3 1192 aaKnown RBP12.58□□□□□ -0.4
MSH5-205ENST00000395853 KIF21BO75037 1637 aa12.57□□□□□ -0.4
MSH5-205ENST00000395853 ZMYND15Q9H091 742 aa12.57□□□□□ -0.4
MSH5-205ENST00000395853 ZCCHC11Q5TAX3 1644 aaKnown RBP12.56□□□□□ -0.4
MSH5-205ENST00000395853 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.55□□□□□ -0.4
MSH5-205ENST00000395853 HECW2Q9P2P5 1572 aa12.55□□□□□ -0.4
MSH5-205ENST00000395853 NCBP3Q53F19 620 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms