RNA–Protein interactions for RNA: ENST00000395667.7

CDRT1-203, CMT1A duplicated region transcript 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDRT1, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-203ENST00000395667 ABCA10Q8WWZ4 1543 aa13.56□□□□□ -0.24
CDRT1-203ENST00000395667 MAP3K1Q13233 1512 aa13.55□□□□□ -0.24
CDRT1-203ENST00000395667 MIER1Q8N108 512 aa13.54□□□□□ -0.24
CDRT1-203ENST00000395667 YTHDC1Q96MU7 727 aaKnown RBP13.54□□□□□ -0.24
CDRT1-203ENST00000395667 LRRC9Q6ZRR7 1453 aa13.53□□□□□ -0.24
CDRT1-203ENST00000395667 GTF3C3Q9Y5Q9 886 aa13.52□□□□□ -0.25
CDRT1-203ENST00000395667 FHOD3Q2V2M9 1422 aa13.51□□□□□ -0.25
CDRT1-203ENST00000395667 FAM50AQ14320 339 aaKnown RBP13.5□□□□□ -0.25
CDRT1-203ENST00000395667 PCF11O94913 1555 aaKnown RBP13.5□□□□□ -0.25
CDRT1-203ENST00000395667 LAMC3Q9Y6N6 1575 aa13.49□□□□□ -0.25
CDRT1-203ENST00000395667 CUL7Q14999 1698 aa13.49□□□□□ -0.25
CDRT1-203ENST00000395667 PHLDB1Q86UU1 1377 aa13.49□□□□□ -0.25
CDRT1-203ENST00000395667 RAB3GAP2Q9H2M9 1393 aa13.48□□□□□ -0.25
CDRT1-203ENST00000395667 URB2Q14146 1524 aaKnown RBP13.48□□□□□ -0.25
CDRT1-203ENST00000395667 EFCAB5A4FU69 1503 aa13.47□□□□□ -0.25
CDRT1-203ENST00000395667 CFAP43Q8NDM7 1665 aa13.46□□□□□ -0.25
CDRT1-203ENST00000395667 TDRD9Q8NDG6 1382 aaKnown RBP13.46□□□□□ -0.26
CDRT1-203ENST00000395667 SETD5Q9C0A6 1442 aa13.44□□□□□ -0.26
CDRT1-203ENST00000395667 PDS5BQ9NTI5 1447 aa13.44□□□□□ -0.26
CDRT1-203ENST00000395667 FYCO1Q9BQS8 1478 aa13.44□□□□□ -0.26
CDRT1-203ENST00000395667 CTTNBP2Q8WZ74 1663 aa13.44□□□□□ -0.26
CDRT1-203ENST00000395667 CASKIN1Q8WXD9 1431 aa13.43□□□□□ -0.26
CDRT1-203ENST00000395667 FMN1Q68DA7 1419 aa13.41□□□□□ -0.26
CDRT1-203ENST00000395667 DNAJC5BQ9UF47 199 aa13.41□□□□□ -0.26
CDRT1-203ENST00000395667 GAPVD1Q14C86 1478 aa13.41□□□□□ -0.26
CDRT1-203ENST00000395667 AQRO60306 1485 aaKnown RBP eCLIP13.41□□□□□ -0.26
CDRT1-203ENST00000395667 WDR97A6NE52 1622 aa13.41□□□□□ -0.26
CDRT1-203ENST00000395667 PELP1Q8IZL8 1130 aaKnown RBP13.4□□□□□ -0.26
CDRT1-203ENST00000395667 ABCA5Q8WWZ7 1642 aa13.38□□□□□ -0.27
CDRT1-203ENST00000395667 MAPKBP1O60336 1514 aa13.37□□□□□ -0.27
CDRT1-203ENST00000395667 MTUS2Q5JR59 1369 aa13.37□□□□□ -0.27
CDRT1-203ENST00000395667 KIF21AQ7Z4S6 1674 aa13.35□□□□□ -0.27
CDRT1-203ENST00000395667 SNAPC4Q5SXM2 1469 aa13.34□□□□□ -0.27
CDRT1-203ENST00000395667 SIN3AQ96ST3 1273 aa13.33□□□□□ -0.28
CDRT1-203ENST00000395667 FGD6Q6ZV73 1430 aa13.32□□□□□ -0.28
CDRT1-203ENST00000395667 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.32□□□□□ -0.28
CDRT1-203ENST00000395667 SAMD9Q5K651 1589 aa13.32□□□□□ -0.28
CDRT1-203ENST00000395667 TARBP1Q13395 1621 aaKnown RBP13.28□□□□□ -0.28
CDRT1-203ENST00000395667 GRIN2BQ13224 1484 aa13.27□□□□□ -0.28
CDRT1-203ENST00000395667 NCOA2Q15596 1464 aa13.26□□□□□ -0.29
CDRT1-203ENST00000395667 LRRIQ1Q96JM4 1722 aa13.25□□□□□ -0.29
CDRT1-203ENST00000395667 MYOM3Q5VTT5 1437 aa13.25□□□□□ -0.29
CDRT1-203ENST00000395667 TIMELESSQ9UNS1 1208 aa13.25□□□□□ -0.29
CDRT1-203ENST00000395667 THOC2Q8NI27 1593 aaKnown RBP13.25□□□□□ -0.29
CDRT1-203ENST00000395667 SUPT6HQ7KZ85 1726 aaKnown RBP13.23□□□□□ -0.29
CDRT1-203ENST00000395667 CCDC18Q5T9S5 1454 aa13.23□□□□□ -0.29
CDRT1-203ENST00000395667 EHBP1L1Q8N3D4 1523 aa13.23□□□□□ -0.29
CDRT1-203ENST00000395667 PBRM1Q86U86 1689 aa13.23□□□□□ -0.29
CDRT1-203ENST00000395667 MRC2Q9UBG0 1479 aa13.22□□□□□ -0.29
CDRT1-203ENST00000395667 PTPRKQ15262 1439 aa13.22□□□□□ -0.29
CDRT1-203ENST00000395667 HFM1A2PYH4 1435 aa13.21□□□□□ -0.29
CDRT1-203ENST00000395667 IQGAP2Q13576 1575 aa13.2□□□□□ -0.3
CDRT1-203ENST00000395667 PPP1R15AO75807 674 aaPredicted RBP13.19□□□□□ -0.3
CDRT1-203ENST00000395667 ADAMTS12P58397 1594 aa13.19□□□□□ -0.3
CDRT1-203ENST00000395667 TONSLQ96HA7 1378 aa13.19□□□□□ -0.3
CDRT1-203ENST00000395667 DDX10Q13206 875 aaKnown RBP13.19□□□□□ -0.3
CDRT1-203ENST00000395667 PTPN23Q9H3S7 1636 aa13.19□□□□□ -0.3
CDRT1-203ENST00000395667 ARID3CA6NKF2 412 aa13.18□□□□□ -0.3
CDRT1-203ENST00000395667 UACAQ9BZF9 1416 aa13.18□□□□□ -0.3
CDRT1-203ENST00000395667 HECW1Q76N89 1606 aa13.18□□□□□ -0.3
CDRT1-203ENST00000395667 UGGT2Q9NYU1 1516 aa13.18□□□□□ -0.3
CDRT1-203ENST00000395667 NAIPQ13075 1403 aa13.17□□□□□ -0.3
CDRT1-203ENST00000395667 MAGI3Q5TCQ9 1506 aa13.17□□□□□ -0.3
CDRT1-203ENST00000395667 HIRIP3Q9BW71 556 aaPredicted RBP13.16□□□□□ -0.3
CDRT1-203ENST00000395667 CHIC2Q9UKJ5 165 aa13.16□□□□□ -0.3
CDRT1-203ENST00000395667 EPRSP07814 1512 aaKnown RBP13.15□□□□□ -0.3
CDRT1-203ENST00000395667 RRP7BPQ9NSQ0 103 aa13.15□□□□□ -0.3
CDRT1-203ENST00000395667 IFT140Q96RY7 1462 aa13.14□□□□□ -0.31
CDRT1-203ENST00000395667 ARHGEF11O15085 1522 aa13.14□□□□□ -0.31
CDRT1-203ENST00000395667 ZNF608Q9ULD9 1512 aaPredicted RBP13.14□□□□□ -0.31
CDRT1-203ENST00000395667 CDK13Q14004 1512 aaKnown RBP13.13□□□□□ -0.31
CDRT1-203ENST00000395667 KCNH8Q96L42 1107 aa13.13□□□□□ -0.31
CDRT1-203ENST00000395667 TRIM52Q96A61 297 aa13.12□□□□□ -0.31
CDRT1-203ENST00000395667 WDR62O43379 1518 aa13.11□□□□□ -0.31
CDRT1-203ENST00000395667 TCOF1Q13428 1488 aaKnown RBP13.1□□□□□ -0.31
CDRT1-203ENST00000395667 MIA2Q96PC5 1412 aa13.08□□□□□ -0.32
CDRT1-203ENST00000395667 KIAA0586Q9BVV6 1533 aa13.08□□□□□ -0.32
CDRT1-203ENST00000395667 ANP32CO43423 234 aa13.06□□□□□ -0.32
CDRT1-203ENST00000395667 ERCC6Q03468 1493 aa13.05□□□□□ -0.32
CDRT1-203ENST00000395667 KIAA0556O60303 1618 aa13.05□□□□□ -0.32
CDRT1-203ENST00000395667 CDK11AQ9UQ88 783 aaPredicted RBP13.05□□□□□ -0.32
CDRT1-203ENST00000395667 GCC2Q8IWJ2 1684 aa13.05□□□□□ -0.32
CDRT1-203ENST00000395667 GRIN2AQ12879 1464 aa13.05□□□□□ -0.32
CDRT1-203ENST00000395667 AKNAQ7Z591 1439 aa13.04□□□□□ -0.32
CDRT1-203ENST00000395667 DISP1Q96F81 1524 aa13.04□□□□□ -0.32
CDRT1-203ENST00000395667 SUPT16HQ9Y5B9 1047 aaKnown RBP13.04□□□□□ -0.32
CDRT1-203ENST00000395667 CHMP7Q8WUX9 453 aaPredicted RBP13.04□□□□□ -0.32
CDRT1-203ENST00000395667 EIF4G3O43432 1585 aaKnown RBP13.03□□□□□ -0.32
CDRT1-203ENST00000395667 FBLN2P98095 1184 aa13.03□□□□□ -0.32
CDRT1-203ENST00000395667 MPHOSPH9Q99550 1183 aa13.02□□□□□ -0.33
CDRT1-203ENST00000395667 NUP153P49790 1475 aaKnown RBP13.01□□□□□ -0.33
CDRT1-203ENST00000395667 KDM6BO15054 1643 aa13.01□□□□□ -0.33
CDRT1-203ENST00000395667 RAPGEF6Q8TEU7 1601 aa13□□□□□ -0.33
CDRT1-203ENST00000395667 CCER2I3L3R5 266 aa13□□□□□ -0.33
CDRT1-203ENST00000395667 ZNF644Q9H582 1327 aaPredicted RBP12.99□□□□□ -0.33
CDRT1-203ENST00000395667 DAPK1P53355 1430 aa12.99□□□□□ -0.33
CDRT1-203ENST00000395667 FOXD1Q16676 465 aa12.99□□□□□ -0.33
CDRT1-203ENST00000395667 MAGI1Q96QZ7 1491 aaPredicted RBP12.98□□□□□ -0.33
CDRT1-203ENST00000395667 KDM5BQ9UGL1 1544 aa12.98□□□□□ -0.33
CDRT1-203ENST00000395667 DENND4BO75064 1496 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms