RNA–Protein interactions for RNA: ENST00000395601.7

SNTB1-201, Transcript of syntrophin beta 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNTB1, Length 5,164 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-201ENST00000395601 TONSLQ96HA7 1378 aa24.81■■□□□ 1.56
SNTB1-201ENST00000395601 DIEXFQ68CQ4 756 aaKnown RBP24.81■■□□□ 1.56
SNTB1-201ENST00000395601 ARID4BQ4LE39 1312 aaPredicted RBP24.76■■□□□ 1.55
SNTB1-201ENST00000395601 BICRAQ9NZM4 1560 aa24.73■■□□□ 1.55
SNTB1-201ENST00000395601 RAPGEF2Q9Y4G8 1499 aa24.73■■□□□ 1.55
SNTB1-201ENST00000395601 CCNB3Q8WWL7 1395 aa24.72■■□□□ 1.55
SNTB1-201ENST00000395601 JPH4Q96JJ6 628 aa24.69■■□□□ 1.54
SNTB1-201ENST00000395601 FGD5Q6ZNL6 1462 aa24.67■■□□□ 1.54
SNTB1-201ENST00000395601 ANP32CO43423 234 aa24.65■■□□□ 1.54
SNTB1-201ENST00000395601 HMGXB3Q12766 1538 aa24.64■■□□□ 1.54
SNTB1-201ENST00000395601 DNAJC5BQ9UF47 199 aa24.64■■□□□ 1.53
SNTB1-201ENST00000395601 NESP48681 1621 aa24.63■■□□□ 1.53
SNTB1-201ENST00000395601 ZNF316A6NFI3 1004 aaPredicted RBP24.62■■□□□ 1.53
SNTB1-201ENST00000395601 RAD54L2Q9Y4B4 1467 aa24.62■■□□□ 1.53
SNTB1-201ENST00000395601 OSCARQ8IYS5 282 aa24.61■■□□□ 1.53
SNTB1-201ENST00000395601 KDM2AQ9Y2K7 1162 aa24.61■■□□□ 1.53
SNTB1-201ENST00000395601 FMN1Q68DA7 1419 aa24.6■■□□□ 1.53
SNTB1-201ENST00000395601 CFTRP13569 1480 aa24.6■■□□□ 1.53
SNTB1-201ENST00000395601 GAPVD1Q14C86 1478 aa24.58■■□□□ 1.53
SNTB1-201ENST00000395601 VPS8Q8N3P4 1428 aa24.56■■□□□ 1.52
SNTB1-201ENST00000395601 ACIN1Q9UKV3 1341 aaKnown RBP24.55■■□□□ 1.52
SNTB1-201ENST00000395601 RUSC2Q8N2Y8 1516 aa24.52■■□□□ 1.52
SNTB1-201ENST00000395601 PPP1R15AO75807 674 aaPredicted RBP24.51■■□□□ 1.51
SNTB1-201ENST00000395601 FHOD3Q2V2M9 1422 aa24.5■■□□□ 1.51
SNTB1-201ENST00000395601 AQRO60306 1485 aaKnown RBP eCLIP24.49■■□□□ 1.511e-7■■■■■ 57.4
SNTB1-201ENST00000395601 MRC2Q9UBG0 1479 aa24.47■■□□□ 1.51
SNTB1-201ENST00000395601 IGF1RP08069 1367 aa24.46■■□□□ 1.51
SNTB1-201ENST00000395601 SENP3Q9H4L4 574 aaPredicted RBP24.46■■□□□ 1.51
SNTB1-201ENST00000395601 RGL3Q3MIN7 710 aa24.43■■□□□ 1.5
SNTB1-201ENST00000395601 CYB5RLQ6IPT4 315 aa24.43■■□□□ 1.5
SNTB1-201ENST00000395601 EFCAB2Q5VUJ9 269 aa24.43■■□□□ 1.5
SNTB1-201ENST00000395601 KANK4Q5T7N3 995 aaPredicted RBP24.43■■□□□ 1.5
SNTB1-201ENST00000395601 NEFMP07197 916 aa24.41■■□□□ 1.5
SNTB1-201ENST00000395601 PTPRGP23470 1445 aa24.4■■□□□ 1.5
SNTB1-201ENST00000395601 ARHGAP35Q9NRY4 1499 aa24.4■■□□□ 1.5
SNTB1-201ENST00000395601 MLECQ14165 292 aa24.39■■□□□ 1.49
SNTB1-201ENST00000395601 SLC24A1O60721 1099 aa24.33■■□□□ 1.49
SNTB1-201ENST00000395601 ERICH6Q7L0X2 663 aa24.32■■□□□ 1.48
SNTB1-201ENST00000395601 GRIN2BQ13224 1484 aa24.32■■□□□ 1.48
SNTB1-201ENST00000395601 KANK1Q14678 1352 aa24.29■■□□□ 1.48
SNTB1-201ENST00000395601 IFT140Q96RY7 1462 aa24.29■■□□□ 1.48
SNTB1-201ENST00000395601 TOPBP1Q92547 1522 aa24.29■■□□□ 1.48
SNTB1-201ENST00000395601 UNC13AQ9UPW8 1703 aa24.29■■□□□ 1.48
SNTB1-201ENST00000395601 GGT6Q6P531 493 aa24.28■■□□□ 1.48
SNTB1-201ENST00000395601 C14orf37Q86TY3 774 aa24.25■■□□□ 1.47
SNTB1-201ENST00000395601 DDX10Q13206 875 aaKnown RBP24.23■■□□□ 1.47
SNTB1-201ENST00000395601 CCDC18Q5T9S5 1454 aa24.22■■□□□ 1.47
SNTB1-201ENST00000395601 EIF4G2P78344 907 aaKnown RBP eCLIP24.2■■□□□ 1.47
SNTB1-201ENST00000395601 LAMC3Q9Y6N6 1575 aa24.2■■□□□ 1.46
SNTB1-201ENST00000395601 POLA1P09884 1462 aaPredicted RBP24.2■■□□□ 1.46
SNTB1-201ENST00000395601 SYNJ1O43426 1573 aa24.19■■□□□ 1.46
SNTB1-201ENST00000395601 HNRNPMP52272 730 aaKnown RBP eCLIP24.19■■□□□ 1.462e-7■■■■■ 29.9
SNTB1-201ENST00000395601 HIRIP3Q9BW71 556 aaPredicted RBP24.15■■□□□ 1.46
SNTB1-201ENST00000395601 CUX1P39880 1505 aa24.15■■□□□ 1.46
SNTB1-201ENST00000395601 SCAF1Q9H7N4 1312 aaKnown RBP24.13■■□□□ 1.45
SNTB1-201ENST00000395601 DNMBPQ6XZF7 1577 aa24.13■■□□□ 1.45
SNTB1-201ENST00000395601 SPAG9O60271 1321 aaKnown RBP24.12■■□□□ 1.45
SNTB1-201ENST00000395601 ANKRD30AQ9BXX3 1397 aa24.12■■□□□ 1.45
SNTB1-201ENST00000395601 RSPH4AQ5TD94 716 aa24.12■■□□□ 1.45
SNTB1-201ENST00000395601 SIN3AQ96ST3 1273 aa24.12■■□□□ 1.45
SNTB1-201ENST00000395601 SETD5Q9C0A6 1442 aa24.08■■□□□ 1.45
SNTB1-201ENST00000395601 TOP2BQ02880 1626 aa24.08■■□□□ 1.45
SNTB1-201ENST00000395601 TMC1Q8TDI8 760 aa24.08■■□□□ 1.44
SNTB1-201ENST00000395601 CARD11Q9BXL7 1154 aa24.08■■□□□ 1.44
SNTB1-201ENST00000395601 KIF3BO15066 747 aa24.07■■□□□ 1.44
SNTB1-201ENST00000395601 PEG3Q9GZU2 1588 aa24.07■■□□□ 1.44
SNTB1-201ENST00000395601 HDGFP51858 240 aaKnown RBP24.05■■□□□ 1.44
SNTB1-201ENST00000395601 PKD2Q13563 968 aa24.05■■□□□ 1.44
SNTB1-201ENST00000395601 SNAPC4Q5SXM2 1469 aa24.04■■□□□ 1.44
SNTB1-201ENST00000395601 CANXP27824 592 aaKnown RBP24.03■■□□□ 1.44
SNTB1-201ENST00000395601 CLSPNQ9HAW4 1339 aa24.02■■□□□ 1.44
SNTB1-201ENST00000395601 PLEKHG5O94827 1062 aa24.02■■□□□ 1.44
SNTB1-201ENST00000395601 POGKQ9P215 609 aa24.02■■□□□ 1.44
SNTB1-201ENST00000395601 NUP155O75694 1391 aa24.01■■□□□ 1.43
SNTB1-201ENST00000395601 PRG4Q92954 1404 aaPredicted RBP24.01■■□□□ 1.43
SNTB1-201ENST00000395601 DCAF11Q8TEB1 546 aa24.01■■□□□ 1.43
SNTB1-201ENST00000395601 FAM69CQ0P6D2 419 aa24■■□□□ 1.43
SNTB1-201ENST00000395601 CDCA8Q53HL2 280 aa23.98■■□□□ 1.43
SNTB1-201ENST00000395601 FAM9BQ8IZU0 186 aa23.96■■□□□ 1.43
SNTB1-201ENST00000395601 DAXXQ9UER7 740 aaPredicted RBP23.95■■□□□ 1.42
SNTB1-201ENST00000395601 FOXD1Q16676 465 aa23.95■■□□□ 1.42
SNTB1-201ENST00000395601 ZBTB7CA1YPR0 619 aa23.94■■□□□ 1.42
SNTB1-201ENST00000395601 WASHC2CQ9Y4E1 1318 aa23.92■■□□□ 1.42
SNTB1-201ENST00000395601 MPHOSPH9Q99550 1183 aa23.92■■□□□ 1.42
SNTB1-201ENST00000395601 ZBTB47Q9UFB7 747 aaPredicted RBP23.91■■□□□ 1.42
SNTB1-201ENST00000395601 WDR43Q15061 677 aaKnown RBP eCLIP23.91■■□□□ 1.42
SNTB1-201ENST00000395601 ERICH3Q5RHP9 1530 aa23.89■■□□□ 1.42
SNTB1-201ENST00000395601 RAB3GAP2Q9H2M9 1393 aa23.89■■□□□ 1.42
SNTB1-201ENST00000395601 ABCA10Q8WWZ4 1543 aa23.88■■□□□ 1.41
SNTB1-201ENST00000395601 PRDM2Q13029 1718 aa23.87■■□□□ 1.41
SNTB1-201ENST00000395601 HAP1P54257 671 aaPredicted RBP23.87■■□□□ 1.41
SNTB1-201ENST00000395601 SALL2Q9Y467 1007 aaPredicted RBP23.86■■□□□ 1.41
SNTB1-201ENST00000395601 MRS2Q9HD23 443 aa23.86■■□□□ 1.41
SNTB1-201ENST00000395601 KIF21BO75037 1637 aa23.84■■□□□ 1.41
SNTB1-201ENST00000395601 HNRNPUQ00839 825 aaKnown RBP eCLIP23.84■■□□□ 1.413e-6■□□□□ 9.6
SNTB1-201ENST00000395601 PRXQ9BXM0 1461 aa23.84■■□□□ 1.41
SNTB1-201ENST00000395601 URB2Q14146 1524 aaKnown RBP23.83■■□□□ 1.41
SNTB1-201ENST00000395601 KNSTRNQ9Y448 316 aa23.82■■□□□ 1.4
SNTB1-201ENST00000395601 TIMELESSQ9UNS1 1208 aa23.81■■□□□ 1.4
SNTB1-201ENST00000395601 SYNJ2O15056 1496 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms