RNA–Protein interactions for RNA: ENST00000395360.6

RAPGEF3-203, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-203ENST00000395360 ADAMTS12P58397 1594 aa23.72■■□□□ 1.39
RAPGEF3-203ENST00000395360 RANGAP1P46060 587 aaPredicted RBP23.72■■□□□ 1.39
RAPGEF3-203ENST00000395360 FHAD1B1AJZ9 1412 aa23.71■■□□□ 1.39
RAPGEF3-203ENST00000395360 CCER1Q8TC90 406 aaPredicted RBP23.7■■□□□ 1.38
RAPGEF3-203ENST00000395360 VPS8Q8N3P4 1428 aa23.7■■□□□ 1.38
RAPGEF3-203ENST00000395360 CARMIL1Q5VZK9 1371 aa23.7■■□□□ 1.38
RAPGEF3-203ENST00000395360 SYNJ2O15056 1496 aa23.67■■□□□ 1.38
RAPGEF3-203ENST00000395360 CHMP7Q8WUX9 453 aaPredicted RBP23.59■■□□□ 1.37
RAPGEF3-203ENST00000395360 APLP2Q06481 763 aa23.58■■□□□ 1.37
RAPGEF3-203ENST00000395360 GRIN2AQ12879 1464 aa23.57■■□□□ 1.36
RAPGEF3-203ENST00000395360 CHD1O14646 1710 aa23.53■■□□□ 1.36
RAPGEF3-203ENST00000395360 FBLN2P98095 1184 aa23.53■■□□□ 1.36
RAPGEF3-203ENST00000395360 ARAP1Q96P48 1450 aa23.48■■□□□ 1.35
RAPGEF3-203ENST00000395360 NUP160Q12769 1436 aa23.46■■□□□ 1.35
RAPGEF3-203ENST00000395360 CEP170Q5SW79 1584 aa23.42■■□□□ 1.34
RAPGEF3-203ENST00000395360 HNRNPUL2Q1KMD3 747 aaKnown RBP23.41■■□□□ 1.34
RAPGEF3-203ENST00000395360 KIAA0586Q9BVV6 1533 aa23.37■■□□□ 1.33
RAPGEF3-203ENST00000395360 OSCARQ8IYS5 282 aa23.37■■□□□ 1.33
RAPGEF3-203ENST00000395360 CTTNBP2Q8WZ74 1663 aa23.37■■□□□ 1.33
RAPGEF3-203ENST00000395360 ARHGAP35Q9NRY4 1499 aa23.35■■□□□ 1.33
RAPGEF3-203ENST00000395360 CLASP1Q7Z460 1538 aa23.32■■□□□ 1.32
RAPGEF3-203ENST00000395360 IQGAP2Q13576 1575 aa23.31■■□□□ 1.32
RAPGEF3-203ENST00000395360 KANK4Q5T7N3 995 aaPredicted RBP23.3■■□□□ 1.32
RAPGEF3-203ENST00000395360 SHROOM2Q13796 1616 aa23.22■■□□□ 1.31
RAPGEF3-203ENST00000395360 UGGT2Q9NYU1 1516 aa23.21■■□□□ 1.31
RAPGEF3-203ENST00000395360 JPH4Q96JJ6 628 aa23.2■■□□□ 1.3
RAPGEF3-203ENST00000395360 EFCAB5A4FU69 1503 aa23.14■■□□□ 1.29
RAPGEF3-203ENST00000395360 SAMD9Q5K651 1589 aa23.12■■□□□ 1.29
RAPGEF3-203ENST00000395360 CARMIL2Q6F5E8 1435 aa23.11■■□□□ 1.29
RAPGEF3-203ENST00000395360 PRG4Q92954 1404 aaPredicted RBP23.11■■□□□ 1.29
RAPGEF3-203ENST00000395360 RRBP1Q9P2E9 1410 aaKnown RBP23.1■■□□□ 1.29
RAPGEF3-203ENST00000395360 DISP1Q96F81 1524 aa23.09■■□□□ 1.29
RAPGEF3-203ENST00000395360 KIAA0556O60303 1618 aa23.08■■□□□ 1.29
RAPGEF3-203ENST00000395360 DIEXFQ68CQ4 756 aaKnown RBP23.04■■□□□ 1.28
RAPGEF3-203ENST00000395360 P3H3Q8IVL6 736 aa23.04■■□□□ 1.28
RAPGEF3-203ENST00000395360 TIAM1Q13009 1591 aa23.04■■□□□ 1.28
RAPGEF3-203ENST00000395360 CCNB3Q8WWL7 1395 aa23.03■■□□□ 1.28
RAPGEF3-203ENST00000395360 MAP3K1Q13233 1512 aa23.02■■□□□ 1.28
RAPGEF3-203ENST00000395360 ERCC6L2Q5T890 1561 aa23■■□□□ 1.27
RAPGEF3-203ENST00000395360 ARHGEF11O15085 1522 aa22.98■■□□□ 1.27
RAPGEF3-203ENST00000395360 ZNF316A6NFI3 1004 aaPredicted RBP22.97■■□□□ 1.27
RAPGEF3-203ENST00000395360 FHOD3Q2V2M9 1422 aa22.97■■□□□ 1.27
RAPGEF3-203ENST00000395360 LRRC9Q6ZRR7 1453 aa22.96■■□□□ 1.27
RAPGEF3-203ENST00000395360 PCF11O94913 1555 aaKnown RBP22.95■■□□□ 1.26
RAPGEF3-203ENST00000395360 ATP1B4Q9UN42 357 aaPredicted RBP22.94■■□□□ 1.26
RAPGEF3-203ENST00000395360 DHX57Q6P158 1386 aaKnown RBP22.94■■□□□ 1.26
RAPGEF3-203ENST00000395360 ITGAEP38570 1179 aa22.92■■□□□ 1.26
RAPGEF3-203ENST00000395360 PTPRGP23470 1445 aa22.91■■□□□ 1.26
RAPGEF3-203ENST00000395360 FMN1Q68DA7 1419 aa22.91■■□□□ 1.26
RAPGEF3-203ENST00000395360 RIMBP3CA6NJZ7 1639 aa22.91■■□□□ 1.26
RAPGEF3-203ENST00000395360 RIMBP3BA6NNM3 1639 aa22.91■■□□□ 1.26
RAPGEF3-203ENST00000395360 RIMBP3Q9UFD9 1639 aa22.91■■□□□ 1.26
RAPGEF3-203ENST00000395360 CLSPNQ9HAW4 1339 aa22.9■■□□□ 1.26
RAPGEF3-203ENST00000395360 CFAP43Q8NDM7 1665 aa22.88■■□□□ 1.25
RAPGEF3-203ENST00000395360 DNAJC5Q9H3Z4 198 aa22.87■■□□□ 1.25
RAPGEF3-203ENST00000395360 FYCO1Q9BQS8 1478 aa22.86■■□□□ 1.25
RAPGEF3-203ENST00000395360 PHLDB1Q86UU1 1377 aa22.86■■□□□ 1.25
RAPGEF3-203ENST00000395360 CASKIN1Q8WXD9 1431 aa22.85■■□□□ 1.25
RAPGEF3-203ENST00000395360 ABCA8O94911 1581 aa22.79■■□□□ 1.24
RAPGEF3-203ENST00000395360 UACAQ9BZF9 1416 aa22.79■■□□□ 1.24
RAPGEF3-203ENST00000395360 RAPGEF6Q8TEU7 1601 aa22.77■■□□□ 1.24
RAPGEF3-203ENST00000395360 PLB1Q6P1J6 1458 aa22.77■■□□□ 1.24
RAPGEF3-203ENST00000395360 FAM50AQ14320 339 aaKnown RBP22.77■■□□□ 1.24
RAPGEF3-203ENST00000395360 UHRF1BP1LA0JNW5 1464 aa22.76■■□□□ 1.23
RAPGEF3-203ENST00000395360 PELP1Q8IZL8 1130 aaKnown RBP22.75■■□□□ 1.23
RAPGEF3-203ENST00000395360 RAB3GAP2Q9H2M9 1393 aa22.75■■□□□ 1.23
RAPGEF3-203ENST00000395360 ABCC2Q92887 1545 aa22.75■■□□□ 1.23
RAPGEF3-203ENST00000395360 HECW1Q76N89 1606 aa22.74■■□□□ 1.23
RAPGEF3-203ENST00000395360 CYB5RLQ6IPT4 315 aa22.7■■□□□ 1.22
RAPGEF3-203ENST00000395360 NUP153P49790 1475 aaKnown RBP22.69■■□□□ 1.22
RAPGEF3-203ENST00000395360 ADCY10Q96PN6 1610 aa22.68■■□□□ 1.22
RAPGEF3-203ENST00000395360 SETD5Q9C0A6 1442 aa22.68■■□□□ 1.22
RAPGEF3-203ENST00000395360 SCAF1Q9H7N4 1312 aaKnown RBP22.65■■□□□ 1.22
RAPGEF3-203ENST00000395360 CCDC18Q5T9S5 1454 aa22.65■■□□□ 1.22
RAPGEF3-203ENST00000395360 MTUS2Q5JR59 1369 aa22.65■■□□□ 1.22
RAPGEF3-203ENST00000395360 EPRSP07814 1512 aaKnown RBP22.64■■□□□ 1.21
RAPGEF3-203ENST00000395360 KDM5BQ9UGL1 1544 aa22.64■■□□□ 1.21
RAPGEF3-203ENST00000395360 LRRIQ1Q96JM4 1722 aa22.62■■□□□ 1.21
RAPGEF3-203ENST00000395360 ACIN1Q9UKV3 1341 aaKnown RBP22.61■■□□□ 1.21
RAPGEF3-203ENST00000395360 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.6■■□□□ 1.21
RAPGEF3-203ENST00000395360 MAPKBP1O60336 1514 aa22.59■■□□□ 1.21
RAPGEF3-203ENST00000395360 NEUROD1Q13562 356 aa22.59■■□□□ 1.21
RAPGEF3-203ENST00000395360 ATP10BO94823 1461 aa22.59■■□□□ 1.21
RAPGEF3-203ENST00000395360 FGD6Q6ZV73 1430 aa22.59■■□□□ 1.21
RAPGEF3-203ENST00000395360 MIER1Q8N108 512 aa22.57■■□□□ 1.2
RAPGEF3-203ENST00000395360 NPM1P06748 294 aaKnown RBP eCLIP22.57■■□□□ 1.2
RAPGEF3-203ENST00000395360 ZCCHC11Q5TAX3 1644 aaKnown RBP22.56■■□□□ 1.2
RAPGEF3-203ENST00000395360 CENPBP07199 599 aaPredicted RBP22.56■■□□□ 1.2
RAPGEF3-203ENST00000395360 CDK13Q14004 1512 aaKnown RBP22.55■■□□□ 1.2
RAPGEF3-203ENST00000395360 NCOA2Q15596 1464 aa22.53■■□□□ 1.2
RAPGEF3-203ENST00000395360 ARID3CA6NKF2 412 aa22.52■■□□□ 1.2
RAPGEF3-203ENST00000395360 CDK11AQ9UQ88 783 aaPredicted RBP22.52■■□□□ 1.2
RAPGEF3-203ENST00000395360 EHBP1L1Q8N3D4 1523 aa22.49■■□□□ 1.19
RAPGEF3-203ENST00000395360 SUPT6HQ7KZ85 1726 aaKnown RBP22.49■■□□□ 1.19
RAPGEF3-203ENST00000395360 MYOM3Q5VTT5 1437 aa22.48■■□□□ 1.19
RAPGEF3-203ENST00000395360 PLEKHD1A6NEE1 506 aa22.46■■□□□ 1.19
RAPGEF3-203ENST00000395360 MAGI3Q5TCQ9 1506 aa22.45■■□□□ 1.18
RAPGEF3-203ENST00000395360 ASXL2Q76L83 1435 aa22.44■■□□□ 1.18
RAPGEF3-203ENST00000395360 YTHDC1Q96MU7 727 aaKnown RBP22.43■■□□□ 1.18
RAPGEF3-203ENST00000395360 TROQ12816 1431 aaPredicted RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms