RNA–Protein interactions for RNA: ENST00000395065.7

NXF3-201, Transcript of nuclear RNA export factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF3, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-201ENST00000395065 CCER2I3L3R5 266 aa8.95□□□□□ -0.98
NXF3-201ENST00000395065 RANGAP1P46060 587 aaPredicted RBP8.94□□□□□ -0.98
NXF3-201ENST00000395065 MAPKBP1O60336 1514 aa8.94□□□□□ -0.98
NXF3-201ENST00000395065 PPP1R15AO75807 674 aaPredicted RBP8.93□□□□□ -0.98
NXF3-201ENST00000395065 NEFLP07196 543 aa8.93□□□□□ -0.98
NXF3-201ENST00000395065 MYT1LQ9UL68 1186 aa8.93□□□□□ -0.98
NXF3-201ENST00000395065 ERICH3Q5RHP9 1530 aa8.93□□□□□ -0.98
NXF3-201ENST00000395065 CFTRP13569 1480 aa8.93□□□□□ -0.98
NXF3-201ENST00000395065 ARAP1Q96P48 1450 aa8.93□□□□□ -0.98
NXF3-201ENST00000395065 ADRA2BP18089 450 aa8.93□□□□□ -0.98
NXF3-201ENST00000395065 FOXD1Q16676 465 aa8.93□□□□□ -0.98
NXF3-201ENST00000395065 KANK4Q5T7N3 995 aaPredicted RBP8.92□□□□□ -0.98
NXF3-201ENST00000395065 PRXQ9BXM0 1461 aa8.91□□□□□ -0.98
NXF3-201ENST00000395065 NESP48681 1621 aa8.91□□□□□ -0.98
NXF3-201ENST00000395065 CCNB3Q8WWL7 1395 aa8.91□□□□□ -0.98
NXF3-201ENST00000395065 TIMELESSQ9UNS1 1208 aa8.9□□□□□ -0.98
NXF3-201ENST00000395065 DDX10Q13206 875 aaKnown RBP8.89□□□□□ -0.99
NXF3-201ENST00000395065 SLC4A1APQ9BWU0 796 aaKnown RBP8.88□□□□□ -0.99
NXF3-201ENST00000395065 WDR97A6NE52 1622 aa8.88□□□□□ -0.99
NXF3-201ENST00000395065 KIF27Q86VH2 1401 aa8.88□□□□□ -0.99
NXF3-201ENST00000395065 PRKCSHP14314 528 aaPredicted RBP8.88□□□□□ -0.99
NXF3-201ENST00000395065 RAB3GAP2Q9H2M9 1393 aa8.87□□□□□ -0.99
NXF3-201ENST00000395065 ITGAEP38570 1179 aa8.87□□□□□ -0.99
NXF3-201ENST00000395065 ERICH6BQ5W0A0 696 aa8.86□□□□□ -0.99
NXF3-201ENST00000395065 SETD5Q9C0A6 1442 aa8.84□□□□□ -0.99
NXF3-201ENST00000395065 ANP32CO43423 234 aa8.84□□□□□ -1
NXF3-201ENST00000395065 TRIM52Q96A61 297 aa8.84□□□□□ -1
NXF3-201ENST00000395065 CDK11AQ9UQ88 783 aaPredicted RBP8.84□□□□□ -1
NXF3-201ENST00000395065 MAP3K1Q13233 1512 aa8.83□□□□□ -1
NXF3-201ENST00000395065 CADPSQ9ULU8 1353 aa8.82□□□□□ -1
NXF3-201ENST00000395065 FGD5Q6ZNL6 1462 aa8.81□□□□□ -1
NXF3-201ENST00000395065 ERICH6Q7L0X2 663 aa8.81□□□□□ -1
NXF3-201ENST00000395065 ARHGAP35Q9NRY4 1499 aa8.81□□□□□ -1
NXF3-201ENST00000395065 DEKP35659 375 aaKnown RBP8.8□□□□□ -1
NXF3-201ENST00000395065 KIF21AQ7Z4S6 1674 aa8.78□□□□□ -1
NXF3-201ENST00000395065 SIN3AQ96ST3 1273 aa8.78□□□□□ -1
NXF3-201ENST00000395065 IGF1RP08069 1367 aa8.77□□□□□ -1.01
NXF3-201ENST00000395065 PPP4R2Q9NY27 417 aa8.77□□□□□ -1.01
NXF3-201ENST00000395065 TIAM1Q13009 1591 aa8.77□□□□□ -1.01
NXF3-201ENST00000395065 FANCD2Q9BXW9 1451 aa8.77□□□□□ -1.01
NXF3-201ENST00000395065 THOC2Q8NI27 1593 aaKnown RBP8.75□□□□□ -1.01
NXF3-201ENST00000395065 DNMBPQ6XZF7 1577 aa8.75□□□□□ -1.01
NXF3-201ENST00000395065 CARMIL1Q5VZK9 1371 aa8.73□□□□□ -1.01
NXF3-201ENST00000395065 LRRC9Q6ZRR7 1453 aa8.73□□□□□ -1.01
NXF3-201ENST00000395065 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.73□□□□□ -1.01
NXF3-201ENST00000395065 LAMC3Q9Y6N6 1575 aa8.72□□□□□ -1.01
NXF3-201ENST00000395065 PHLDB1Q86UU1 1377 aa8.72□□□□□ -1.01
NXF3-201ENST00000395065 RAD54L2Q9Y4B4 1467 aa8.72□□□□□ -1.01
NXF3-201ENST00000395065 HNRNPUQ00839 825 aaKnown RBP eCLIP8.72□□□□□ -1.01
NXF3-201ENST00000395065 HIRIP3Q9BW71 556 aaPredicted RBP8.72□□□□□ -1.01
NXF3-201ENST00000395065 PDS5BQ9NTI5 1447 aa8.71□□□□□ -1.01
NXF3-201ENST00000395065 TOPBP1Q92547 1522 aa8.71□□□□□ -1.02
NXF3-201ENST00000395065 AMER1Q5JTC6 1135 aaPredicted RBP8.71□□□□□ -1.02
NXF3-201ENST00000395065 NOP58Q9Y2X3 529 aaKnown RBP8.71□□□□□ -1.02
NXF3-201ENST00000395065 POLA1P09884 1462 aaPredicted RBP8.71□□□□□ -1.02
NXF3-201ENST00000395065 RTN4Q9NQC3 1192 aaKnown RBP8.7□□□□□ -1.02
NXF3-201ENST00000395065 PCF11O94913 1555 aaKnown RBP8.7□□□□□ -1.02
NXF3-201ENST00000395065 CFAP43Q8NDM7 1665 aa8.7□□□□□ -1.02
NXF3-201ENST00000395065 FHAD1B1AJZ9 1412 aa8.7□□□□□ -1.02
NXF3-201ENST00000395065 CTTNBP2Q8WZ74 1663 aa8.7□□□□□ -1.02
NXF3-201ENST00000395065 IRX6P78412 446 aaPredicted RBP8.7□□□□□ -1.02
NXF3-201ENST00000395065 ABCA10Q8WWZ4 1543 aa8.69□□□□□ -1.02
NXF3-201ENST00000395065 CUL7Q14999 1698 aa8.68□□□□□ -1.02
NXF3-201ENST00000395065 URB2Q14146 1524 aaKnown RBP8.68□□□□□ -1.02
NXF3-201ENST00000395065 KDM5BQ9UGL1 1544 aa8.68□□□□□ -1.02
NXF3-201ENST00000395065 PAK3O75914 559 aaPredicted RBP8.67□□□□□ -1.02
NXF3-201ENST00000395065 ANO8Q9HCE9 1232 aaPredicted RBP8.67□□□□□ -1.02
NXF3-201ENST00000395065 TONSLQ96HA7 1378 aa8.67□□□□□ -1.02
NXF3-201ENST00000395065 PPP6R1Q9UPN7 881 aa8.66□□□□□ -1.02
NXF3-201ENST00000395065 NCOA2Q15596 1464 aa8.66□□□□□ -1.02
NXF3-201ENST00000395065 P3H3Q8IVL6 736 aa8.65□□□□□ -1.02
NXF3-201ENST00000395065 ZBED9Q6R2W3 1325 aa8.65□□□□□ -1.02
NXF3-201ENST00000395065 FHOD3Q2V2M9 1422 aa8.65□□□□□ -1.03
NXF3-201ENST00000395065 UACAQ9BZF9 1416 aa8.65□□□□□ -1.03
NXF3-201ENST00000395065 B4GALNT3Q6L9W6 998 aa8.64□□□□□ -1.03
NXF3-201ENST00000395065 EFCAB5A4FU69 1503 aa8.64□□□□□ -1.03
NXF3-201ENST00000395065 FAM50AQ14320 339 aaKnown RBP8.64□□□□□ -1.03
NXF3-201ENST00000395065 IPO9Q96P70 1041 aaKnown RBP8.64□□□□□ -1.03
NXF3-201ENST00000395065 WASHC2AQ641Q2 1341 aa8.64□□□□□ -1.03
NXF3-201ENST00000395065 MRC2Q9UBG0 1479 aa8.63□□□□□ -1.03
NXF3-201ENST00000395065 ABCA5Q8WWZ7 1642 aa8.63□□□□□ -1.03
NXF3-201ENST00000395065 NBR1Q14596 966 aa8.62□□□□□ -1.03
NXF3-201ENST00000395065 RNF123Q5XPI4 1314 aa8.62□□□□□ -1.03
NXF3-201ENST00000395065 HFM1A2PYH4 1435 aa8.62□□□□□ -1.03
NXF3-201ENST00000395065 CNTLNQ9NXG0 1405 aa8.62□□□□□ -1.03
NXF3-201ENST00000395065 FYCO1Q9BQS8 1478 aa8.62□□□□□ -1.03
NXF3-201ENST00000395065 CCDC18Q5T9S5 1454 aa8.61□□□□□ -1.03
NXF3-201ENST00000395065 CCDC184Q52MB2 194 aa8.61□□□□□ -1.03
NXF3-201ENST00000395065 ATP1B4Q9UN42 357 aaPredicted RBP8.61□□□□□ -1.03
NXF3-201ENST00000395065 SALL2Q9Y467 1007 aaPredicted RBP8.61□□□□□ -1.03
NXF3-201ENST00000395065 LRRIQ1Q96JM4 1722 aa8.61□□□□□ -1.03
NXF3-201ENST00000395065 PRKRIP1Q9H875 184 aaPredicted RBP8.6□□□□□ -1.03
NXF3-201ENST00000395065 WDR62O43379 1518 aa8.6□□□□□ -1.03
NXF3-201ENST00000395065 ANP32AP39687 249 aaKnown RBP8.59□□□□□ -1.03
NXF3-201ENST00000395065 PTPN23Q9H3S7 1636 aa8.59□□□□□ -1.03
NXF3-201ENST00000395065 AQRO60306 1485 aaKnown RBP eCLIP8.59□□□□□ -1.03
NXF3-201ENST00000395065 SMG6Q86US8 1419 aaKnown RBP8.59□□□□□ -1.03
NXF3-201ENST00000395065 CASKIN1Q8WXD9 1431 aa8.59□□□□□ -1.03
NXF3-201ENST00000395065 TDRD9Q8NDG6 1382 aaKnown RBP8.59□□□□□ -1.03
NXF3-201ENST00000395065 SAMD9Q5K651 1589 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms