RNA–Protein interactions for RNA: ENST00000394829.6

PPP3CB-204, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-204ENST00000394829 RRBP1Q9P2E9 1410 aaKnown RBP18.38■□□□□ 0.53
PPP3CB-204ENST00000394829 CLSPNQ9HAW4 1339 aa18.37■□□□□ 0.53
PPP3CB-204ENST00000394829 WDR97A6NE52 1622 aa18.37■□□□□ 0.53
PPP3CB-204ENST00000394829 ABCA10Q8WWZ4 1543 aa18.35■□□□□ 0.53
PPP3CB-204ENST00000394829 IGF1RP08069 1367 aa18.31■□□□□ 0.52
PPP3CB-204ENST00000394829 CCNB3Q8WWL7 1395 aa18.31■□□□□ 0.52
PPP3CB-204ENST00000394829 MRC2Q9UBG0 1479 aa18.3■□□□□ 0.52
PPP3CB-204ENST00000394829 ITGAEP38570 1179 aa18.29■□□□□ 0.52
PPP3CB-204ENST00000394829 TARBP1Q13395 1621 aaKnown RBP18.27■□□□□ 0.51
PPP3CB-204ENST00000394829 ABCA5Q8WWZ7 1642 aa18.25■□□□□ 0.51
PPP3CB-204ENST00000394829 WDR62O43379 1518 aa18.23■□□□□ 0.51
PPP3CB-204ENST00000394829 CARMIL1Q5VZK9 1371 aa18.23■□□□□ 0.51
PPP3CB-204ENST00000394829 TIAM1Q13009 1591 aa18.22■□□□□ 0.51
PPP3CB-204ENST00000394829 THOC2Q8NI27 1593 aaKnown RBP18.2■□□□□ 0.5
PPP3CB-204ENST00000394829 RAB3GAP2Q9H2M9 1393 aa18.17■□□□□ 0.5
PPP3CB-204ENST00000394829 CUL7Q14999 1698 aa18.17■□□□□ 0.5
PPP3CB-204ENST00000394829 ERCC6Q03468 1493 aa18.17■□□□□ 0.5
PPP3CB-204ENST00000394829 TDRD9Q8NDG6 1382 aaKnown RBP18.16■□□□□ 0.5
PPP3CB-204ENST00000394829 MAP3K1Q13233 1512 aa18.16■□□□□ 0.5
PPP3CB-204ENST00000394829 LRRC9Q6ZRR7 1453 aa18.15■□□□□ 0.5
PPP3CB-204ENST00000394829 GAPVD1Q14C86 1478 aa18.14■□□□□ 0.49
PPP3CB-204ENST00000394829 P3H3Q8IVL6 736 aa18.13■□□□□ 0.49
PPP3CB-204ENST00000394829 MAPKBP1O60336 1514 aa18.12■□□□□ 0.49
PPP3CB-204ENST00000394829 PHLDB1Q86UU1 1377 aa18.12■□□□□ 0.49
PPP3CB-204ENST00000394829 PBRM1Q86U86 1689 aa18.12■□□□□ 0.49
PPP3CB-204ENST00000394829 PCF11O94913 1555 aaKnown RBP18.09■□□□□ 0.49
PPP3CB-204ENST00000394829 SETD5Q9C0A6 1442 aa18.08■□□□□ 0.48
PPP3CB-204ENST00000394829 ATP1B4Q9UN42 357 aaPredicted RBP18.07■□□□□ 0.48
PPP3CB-204ENST00000394829 CFAP43Q8NDM7 1665 aa18.07■□□□□ 0.48
PPP3CB-204ENST00000394829 IFT140Q96RY7 1462 aa18.07■□□□□ 0.48
PPP3CB-204ENST00000394829 FAM50AQ14320 339 aaKnown RBP18.07■□□□□ 0.48
PPP3CB-204ENST00000394829 FHAD1B1AJZ9 1412 aa18.07■□□□□ 0.48
PPP3CB-204ENST00000394829 AQRO60306 1485 aaKnown RBP eCLIP18.05■□□□□ 0.48
PPP3CB-204ENST00000394829 ZNF608Q9ULD9 1512 aaPredicted RBP18.05■□□□□ 0.48
PPP3CB-204ENST00000394829 CTTNBP2Q8WZ74 1663 aa18.04■□□□□ 0.48
PPP3CB-204ENST00000394829 FHOD3Q2V2M9 1422 aa18.04■□□□□ 0.48
PPP3CB-204ENST00000394829 SIN3AQ96ST3 1273 aa18.01■□□□□ 0.47
PPP3CB-204ENST00000394829 EIF4G3O43432 1585 aaKnown RBP17.99■□□□□ 0.47
PPP3CB-204ENST00000394829 ADAMTS12P58397 1594 aa17.99■□□□□ 0.47
PPP3CB-204ENST00000394829 BCL11AQ9H165 835 aa17.98■□□□□ 0.47
PPP3CB-204ENST00000394829 GRIN2BQ13224 1484 aa17.97■□□□□ 0.47
PPP3CB-204ENST00000394829 FYCO1Q9BQS8 1478 aa17.96■□□□□ 0.47
PPP3CB-204ENST00000394829 KCNH8Q96L42 1107 aa17.96■□□□□ 0.47
PPP3CB-204ENST00000394829 EFCAB5A4FU69 1503 aa17.94■□□□□ 0.46
PPP3CB-204ENST00000394829 CASKIN1Q8WXD9 1431 aa17.94■□□□□ 0.46
PPP3CB-204ENST00000394829 SUPT16HQ9Y5B9 1047 aaKnown RBP17.93■□□□□ 0.46
PPP3CB-204ENST00000394829 DDX10Q13206 875 aaKnown RBP17.88■□□□□ 0.45
PPP3CB-204ENST00000394829 SNAPC4Q5SXM2 1469 aa17.87■□□□□ 0.45
PPP3CB-204ENST00000394829 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.86■□□□□ 0.45
PPP3CB-204ENST00000394829 FMN1Q68DA7 1419 aa17.85■□□□□ 0.45
PPP3CB-204ENST00000394829 HIRIP3Q9BW71 556 aaPredicted RBP17.85■□□□□ 0.45
PPP3CB-204ENST00000394829 FGD6Q6ZV73 1430 aa17.84■□□□□ 0.45
PPP3CB-204ENST00000394829 SAMD9Q5K651 1589 aa17.84■□□□□ 0.45
PPP3CB-204ENST00000394829 LRRIQ1Q96JM4 1722 aa17.83■□□□□ 0.45
PPP3CB-204ENST00000394829 TIMELESSQ9UNS1 1208 aa17.82■□□□□ 0.44
PPP3CB-204ENST00000394829 PPP1R15AO75807 674 aaPredicted RBP17.82■□□□□ 0.44
PPP3CB-204ENST00000394829 MTUS2Q5JR59 1369 aa17.81■□□□□ 0.44
PPP3CB-204ENST00000394829 MAGI1Q96QZ7 1491 aaPredicted RBP17.8■□□□□ 0.44
PPP3CB-204ENST00000394829 PTPRKQ15262 1439 aa17.8■□□□□ 0.44
PPP3CB-204ENST00000394829 IQGAP2Q13576 1575 aa17.78■□□□□ 0.44
PPP3CB-204ENST00000394829 GRIN2AQ12879 1464 aa17.78■□□□□ 0.44
PPP3CB-204ENST00000394829 CCDC18Q5T9S5 1454 aa17.78■□□□□ 0.44
PPP3CB-204ENST00000394829 SYNJ2O15056 1496 aa17.75■□□□□ 0.43
PPP3CB-204ENST00000394829 NCOA2Q15596 1464 aa17.74■□□□□ 0.43
PPP3CB-204ENST00000394829 HFM1A2PYH4 1435 aa17.74■□□□□ 0.43
PPP3CB-204ENST00000394829 PTPN23Q9H3S7 1636 aa17.74■□□□□ 0.43
PPP3CB-204ENST00000394829 TONSLQ96HA7 1378 aa17.72■□□□□ 0.43
PPP3CB-204ENST00000394829 CEP170Q5SW79 1584 aa17.72■□□□□ 0.43
PPP3CB-204ENST00000394829 UACAQ9BZF9 1416 aa17.72■□□□□ 0.43
PPP3CB-204ENST00000394829 MYOM3Q5VTT5 1437 aa17.71■□□□□ 0.43
PPP3CB-204ENST00000394829 NAIPQ13075 1403 aa17.71■□□□□ 0.42
PPP3CB-204ENST00000394829 SUPT6HQ7KZ85 1726 aaKnown RBP17.7■□□□□ 0.42
PPP3CB-204ENST00000394829 UGGT2Q9NYU1 1516 aa17.69■□□□□ 0.42
PPP3CB-204ENST00000394829 KIAA0586Q9BVV6 1533 aa17.69■□□□□ 0.42
PPP3CB-204ENST00000394829 MAGI3Q5TCQ9 1506 aa17.67■□□□□ 0.42
PPP3CB-204ENST00000394829 EHBP1L1Q8N3D4 1523 aa17.67■□□□□ 0.42
PPP3CB-204ENST00000394829 ANP32CO43423 234 aa17.65■□□□□ 0.42
PPP3CB-204ENST00000394829 CHMP7Q8WUX9 453 aaPredicted RBP17.64■□□□□ 0.41
PPP3CB-204ENST00000394829 BCANQ96GW7 911 aa17.64■□□□□ 0.41
PPP3CB-204ENST00000394829 NUP160Q12769 1436 aa17.64■□□□□ 0.41
PPP3CB-204ENST00000394829 TSHZ2Q9NRE2 1034 aa17.64■□□□□ 0.41
PPP3CB-204ENST00000394829 CCER2I3L3R5 266 aa17.63■□□□□ 0.41
PPP3CB-204ENST00000394829 KIAA0556O60303 1618 aa17.63■□□□□ 0.41
PPP3CB-204ENST00000394829 TRIM52Q96A61 297 aa17.63■□□□□ 0.41
PPP3CB-204ENST00000394829 DISP1Q96F81 1524 aa17.63■□□□□ 0.41
PPP3CB-204ENST00000394829 ARHGEF11O15085 1522 aa17.62■□□□□ 0.41
PPP3CB-204ENST00000394829 FKBP8Q14318 412 aa17.62■□□□□ 0.41
PPP3CB-204ENST00000394829 RRP7BPQ9NSQ0 103 aa17.62■□□□□ 0.41
PPP3CB-204ENST00000394829 CHD1O14646 1710 aa17.61■□□□□ 0.41
PPP3CB-204ENST00000394829 CHIC2Q9UKJ5 165 aa17.61■□□□□ 0.41
PPP3CB-204ENST00000394829 KDM5BQ9UGL1 1544 aa17.6■□□□□ 0.41
PPP3CB-204ENST00000394829 FBLN2P98095 1184 aa17.6■□□□□ 0.41
PPP3CB-204ENST00000394829 PRKCSHP14314 528 aaPredicted RBP17.59■□□□□ 0.41
PPP3CB-204ENST00000394829 ANP32EQ9BTT0 268 aa17.56■□□□□ 0.4
PPP3CB-204ENST00000394829 DENND4BO75064 1496 aaPredicted RBP17.55■□□□□ 0.4
PPP3CB-204ENST00000394829 KDM6BO15054 1643 aa17.55■□□□□ 0.4
PPP3CB-204ENST00000394829 HECW1Q76N89 1606 aa17.55■□□□□ 0.4
PPP3CB-204ENST00000394829 GCC2Q8IWJ2 1684 aa17.55■□□□□ 0.4
PPP3CB-204ENST00000394829 TCOF1Q13428 1488 aaKnown RBP17.55■□□□□ 0.4
PPP3CB-204ENST00000394829 ARID3CA6NKF2 412 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms