RNA–Protein interactions for RNA: ENST00000394303.7

CACNB1-202, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNB1, Length 3,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-202ENST00000394303 SALL2Q9Y467 1007 aaPredicted RBP18.43■□□□□ 0.54
CACNB1-202ENST00000394303 MTUS2Q5JR59 1369 aa18.43■□□□□ 0.54
CACNB1-202ENST00000394303 FAM9BQ8IZU0 186 aa18.42■□□□□ 0.54
CACNB1-202ENST00000394303 HNRNPUQ00839 825 aaKnown RBP eCLIP18.4■□□□□ 0.54
CACNB1-202ENST00000394303 KIF27Q86VH2 1401 aa18.38■□□□□ 0.53
CACNB1-202ENST00000394303 KIF21BO75037 1637 aa18.38■□□□□ 0.53
CACNB1-202ENST00000394303 KDM2AQ9Y2K7 1162 aa18.36■□□□□ 0.53
CACNB1-202ENST00000394303 RBM19Q9Y4C8 960 aaKnown RBP18.36■□□□□ 0.53
CACNB1-202ENST00000394303 RAPGEF2Q9Y4G8 1499 aa18.36■□□□□ 0.53
CACNB1-202ENST00000394303 SENP3Q9H4L4 574 aaPredicted RBP18.35■□□□□ 0.53
CACNB1-202ENST00000394303 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.33■□□□□ 0.52
CACNB1-202ENST00000394303 CUX2O14529 1486 aa18.33■□□□□ 0.52
CACNB1-202ENST00000394303 ATAD2BQ9ULI0 1458 aa18.32■□□□□ 0.52
CACNB1-202ENST00000394303 SYNJ1O43426 1573 aa18.27■□□□□ 0.52
CACNB1-202ENST00000394303 CARMIL1Q5VZK9 1371 aa18.27■□□□□ 0.52
CACNB1-202ENST00000394303 FOXD1Q16676 465 aa18.26■□□□□ 0.51
CACNB1-202ENST00000394303 CHMP7Q8WUX9 453 aaPredicted RBP18.26■□□□□ 0.51
CACNB1-202ENST00000394303 TDRD9Q8NDG6 1382 aaKnown RBP18.25■□□□□ 0.51
CACNB1-202ENST00000394303 CCNB3Q8WWL7 1395 aa18.23■□□□□ 0.51
CACNB1-202ENST00000394303 CDK11AQ9UQ88 783 aaPredicted RBP18.23■□□□□ 0.51
CACNB1-202ENST00000394303 PEG3Q9GZU2 1588 aa18.22■□□□□ 0.51
CACNB1-202ENST00000394303 RGL3Q3MIN7 710 aa18.18■□□□□ 0.5
CACNB1-202ENST00000394303 MRS2Q9HD23 443 aa18.16■□□□□ 0.5
CACNB1-202ENST00000394303 RRBP1Q9P2E9 1410 aaKnown RBP18.15■□□□□ 0.5
CACNB1-202ENST00000394303 RAB3GAP2Q9H2M9 1393 aa18.13■□□□□ 0.49
CACNB1-202ENST00000394303 ARAP1Q96P48 1450 aa18.12■□□□□ 0.49
CACNB1-202ENST00000394303 CHGAP10645 457 aaKnown RBP18.12■□□□□ 0.49
CACNB1-202ENST00000394303 MSH5O43196 834 aa18.1■□□□□ 0.49
CACNB1-202ENST00000394303 EIF4G2P78344 907 aaKnown RBP eCLIP18.07■□□□□ 0.482e-8■■■■■ 35.8
CACNB1-202ENST00000394303 TSPY4P0CV99 314 aa18.07■□□□□ 0.48
CACNB1-202ENST00000394303 TSPY10P0CW01 314 aa18.07■□□□□ 0.48
CACNB1-202ENST00000394303 CCER2I3L3R5 266 aa18.06■□□□□ 0.48
CACNB1-202ENST00000394303 FHOD3Q2V2M9 1422 aa18.06■□□□□ 0.48
CACNB1-202ENST00000394303 CFDP1Q9UEE9 299 aaPredicted RBP18.06■□□□□ 0.48
CACNB1-202ENST00000394303 PPP1R15AO75807 674 aaPredicted RBP18.05■□□□□ 0.48
CACNB1-202ENST00000394303 NPM2Q86SE8 214 aaKnown RBP18.04■□□□□ 0.48
CACNB1-202ENST00000394303 WDR97A6NE52 1622 aa18.02■□□□□ 0.48
CACNB1-202ENST00000394303 TMC1Q8TDI8 760 aa18.02■□□□□ 0.47
CACNB1-202ENST00000394303 MAPKBP1O60336 1514 aa18.01■□□□□ 0.47
CACNB1-202ENST00000394303 DAXXQ9UER7 740 aaPredicted RBP18■□□□□ 0.47
CACNB1-202ENST00000394303 SETD5Q9C0A6 1442 aa18■□□□□ 0.47
CACNB1-202ENST00000394303 PLPPR3Q6T4P5 718 aa17.99■□□□□ 0.47
CACNB1-202ENST00000394303 FANCIQ9NVI1 1328 aa17.99■□□□□ 0.47
CACNB1-202ENST00000394303 ERICH3Q5RHP9 1530 aa17.98■□□□□ 0.47
CACNB1-202ENST00000394303 PRXQ9BXM0 1461 aa17.97■□□□□ 0.47
CACNB1-202ENST00000394303 PLEKHD1A6NEE1 506 aa17.97■□□□□ 0.47
CACNB1-202ENST00000394303 CADPSQ9ULU8 1353 aa17.96■□□□□ 0.47
CACNB1-202ENST00000394303 TOP2BQ02880 1626 aa17.96■□□□□ 0.47
CACNB1-202ENST00000394303 DNAJC5BQ9UF47 199 aa17.95■□□□□ 0.46
CACNB1-202ENST00000394303 NCAPD3P42695 1498 aa17.9■□□□□ 0.46
CACNB1-202ENST00000394303 TIMELESSQ9UNS1 1208 aa17.9■□□□□ 0.46
CACNB1-202ENST00000394303 FHAD1B1AJZ9 1412 aa17.89■□□□□ 0.45
CACNB1-202ENST00000394303 IGF1RP08069 1367 aa17.89■□□□□ 0.45
CACNB1-202ENST00000394303 HSPA5P11021 654 aaKnown RBP17.89■□□□□ 0.45
CACNB1-202ENST00000394303 ARHGAP35Q9NRY4 1499 aa17.88■□□□□ 0.45
CACNB1-202ENST00000394303 RAD54L2Q9Y4B4 1467 aa17.88■□□□□ 0.45
CACNB1-202ENST00000394303 CUX1P39880 1505 aa17.87■□□□□ 0.45
CACNB1-202ENST00000394303 DEKP35659 375 aaKnown RBP17.86■□□□□ 0.45
CACNB1-202ENST00000394303 CARD11Q9BXL7 1154 aa17.86■□□□□ 0.45
CACNB1-202ENST00000394303 CCDC136Q96JN2 1154 aa17.85■□□□□ 0.45
CACNB1-202ENST00000394303 HMGXB3Q12766 1538 aa17.83■□□□□ 0.45
CACNB1-202ENST00000394303 B4GALNT3Q6L9W6 998 aa17.83■□□□□ 0.44
CACNB1-202ENST00000394303 DCAF11Q8TEB1 546 aa17.83■□□□□ 0.44
CACNB1-202ENST00000394303 BIVM-ERCC5R4GMW8 1640 aa17.82■□□□□ 0.44
CACNB1-202ENST00000394303 L3MBTL2Q969R5 705 aa17.82■□□□□ 0.44
CACNB1-202ENST00000394303 PPP4R2Q9NY27 417 aa17.81■□□□□ 0.44
CACNB1-202ENST00000394303 CANXP27824 592 aaKnown RBP17.81■□□□□ 0.44
CACNB1-202ENST00000394303 NBR1Q14596 966 aa17.81■□□□□ 0.44
CACNB1-202ENST00000394303 RTL5Q5HYW3 569 aaPredicted RBP17.81■□□□□ 0.44
CACNB1-202ENST00000394303 MPHOSPH9Q99550 1183 aa17.81■□□□□ 0.44
CACNB1-202ENST00000394303 PHLDB1Q86UU1 1377 aa17.81■□□□□ 0.44
CACNB1-202ENST00000394303 PKD2Q13563 968 aa17.79■□□□□ 0.44
CACNB1-202ENST00000394303 ERCC6Q03468 1493 aa17.78■□□□□ 0.44
CACNB1-202ENST00000394303 CFTRP13569 1480 aa17.78■□□□□ 0.44
CACNB1-202ENST00000394303 ZNF644Q9H582 1327 aaPredicted RBP17.77■□□□□ 0.44
CACNB1-202ENST00000394303 CC2D1BQ5T0F9 858 aaKnown RBP17.76■□□□□ 0.43
CACNB1-202ENST00000394303 TIAM1Q13009 1591 aa17.76■□□□□ 0.43
CACNB1-202ENST00000394303 FANCD2Q9BXW9 1451 aa17.76■□□□□ 0.43
CACNB1-202ENST00000394303 FGD5Q6ZNL6 1462 aa17.76■□□□□ 0.43
CACNB1-202ENST00000394303 LRRC9Q6ZRR7 1453 aa17.75■□□□□ 0.43
CACNB1-202ENST00000394303 SLC24A1O60721 1099 aa17.74■□□□□ 0.43
CACNB1-202ENST00000394303 ERICH6BQ5W0A0 696 aa17.74■□□□□ 0.43
CACNB1-202ENST00000394303 NESP48681 1621 aa17.73■□□□□ 0.43
CACNB1-202ENST00000394303 TNNT2P45379 298 aaPredicted RBP17.73■□□□□ 0.43
CACNB1-202ENST00000394303 NOP58Q9Y2X3 529 aaKnown RBP17.73■□□□□ 0.43
CACNB1-202ENST00000394303 HNRNPMP52272 730 aaKnown RBP eCLIP17.72■□□□□ 0.43
CACNB1-202ENST00000394303 NPM1P06748 294 aaKnown RBP eCLIP17.7■□□□□ 0.42
CACNB1-202ENST00000394303 NEUROD2Q15784 382 aa17.7■□□□□ 0.42
CACNB1-202ENST00000394303 PRKCSHP14314 528 aaPredicted RBP17.68■□□□□ 0.42
CACNB1-202ENST00000394303 STAG3Q9UJ98 1225 aa17.68■□□□□ 0.42
CACNB1-202ENST00000394303 PLEKHG5O94827 1062 aa17.67■□□□□ 0.42
CACNB1-202ENST00000394303 ANP32AP39687 249 aaKnown RBP17.67■□□□□ 0.42
CACNB1-202ENST00000394303 MAP3K1Q13233 1512 aa17.66■□□□□ 0.42
CACNB1-202ENST00000394303 FMN1Q68DA7 1419 aa17.65■□□□□ 0.42
CACNB1-202ENST00000394303 PDS5BQ9NTI5 1447 aa17.65■□□□□ 0.42
CACNB1-202ENST00000394303 WDR43Q15061 677 aaKnown RBP eCLIP17.64■□□□□ 0.42
CACNB1-202ENST00000394303 PAK3O75914 559 aaPredicted RBP17.62■□□□□ 0.41
CACNB1-202ENST00000394303 JPH4Q96JJ6 628 aa17.62■□□□□ 0.41
CACNB1-202ENST00000394303 NUP155O75694 1391 aa17.61■□□□□ 0.41
CACNB1-202ENST00000394303 AQRO60306 1485 aaKnown RBP eCLIP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms