RNA–Protein interactions for RNA: ENST00000394223.1

NDUFC1-201, Transcript of NADH:ubiquinone oxidoreductase subunit C1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene NDUFC1, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFC1-201ENST00000394223 ARHGEF11O15085 1522 aa25.07■■□□□ 1.6
NDUFC1-201ENST00000394223 SHROOM2Q13796 1616 aa25.06■■□□□ 1.6
NDUFC1-201ENST00000394223 RIMBP3CA6NJZ7 1639 aa25.04■■□□□ 1.6
NDUFC1-201ENST00000394223 RIMBP3BA6NNM3 1639 aa25.04■■□□□ 1.6
NDUFC1-201ENST00000394223 RIMBP3Q9UFD9 1639 aa25.04■■□□□ 1.6
NDUFC1-201ENST00000394223 IQGAP2Q13576 1575 aa25.03■■□□□ 1.6
NDUFC1-201ENST00000394223 CTTNBP2Q8WZ74 1663 aa25.02■■□□□ 1.6
NDUFC1-201ENST00000394223 JPH4Q96JJ6 628 aa25.01■■□□□ 1.59
NDUFC1-201ENST00000394223 GOLGA3Q08378 1498 aa24.96■■□□□ 1.59
NDUFC1-201ENST00000394223 PRG4Q92954 1404 aaPredicted RBP24.95■■□□□ 1.59
NDUFC1-201ENST00000394223 UGGT2Q9NYU1 1516 aa24.89■■□□□ 1.57
NDUFC1-201ENST00000394223 ERCC6L2Q5T890 1561 aa24.88■■□□□ 1.57
NDUFC1-201ENST00000394223 CARMIL2Q6F5E8 1435 aa24.87■■□□□ 1.57
NDUFC1-201ENST00000394223 ARAP1Q96P48 1450 aa24.87■■□□□ 1.57
NDUFC1-201ENST00000394223 UBTFP17480 764 aaKnown RBP24.84■■□□□ 1.57
NDUFC1-201ENST00000394223 EHMT2Q96KQ7 1210 aa24.82■■□□□ 1.56
NDUFC1-201ENST00000394223 CYB5RLQ6IPT4 315 aa24.8■■□□□ 1.56
NDUFC1-201ENST00000394223 DISP1Q96F81 1524 aa24.8■■□□□ 1.56
NDUFC1-201ENST00000394223 KIAA0556O60303 1618 aa24.78■■□□□ 1.56
NDUFC1-201ENST00000394223 TNIKQ9UKE5 1360 aa24.74■■□□□ 1.55
NDUFC1-201ENST00000394223 SAMD9Q5K651 1589 aa24.7■■□□□ 1.54
NDUFC1-201ENST00000394223 PTPRGP23470 1445 aa24.69■■□□□ 1.54
NDUFC1-201ENST00000394223 EFCAB5A4FU69 1503 aa24.68■■□□□ 1.54
NDUFC1-201ENST00000394223 RANGAP1P46060 587 aaPredicted RBP24.65■■□□□ 1.54
NDUFC1-201ENST00000394223 TTBK1Q5TCY1 1321 aaPredicted RBP24.61■■□□□ 1.53
NDUFC1-201ENST00000394223 P3H3Q8IVL6 736 aa24.59■■□□□ 1.53
NDUFC1-201ENST00000394223 UACAQ9BZF9 1416 aa24.55■■□□□ 1.52
NDUFC1-201ENST00000394223 FHOD3Q2V2M9 1422 aa24.54■■□□□ 1.52
NDUFC1-201ENST00000394223 ADCY10Q96PN6 1610 aa24.53■■□□□ 1.52
NDUFC1-201ENST00000394223 ARHGAP35Q9NRY4 1499 aa24.53■■□□□ 1.52
NDUFC1-201ENST00000394223 LOC105371045A0A1W2PR82 267 aa24.53■■□□□ 1.52
NDUFC1-201ENST00000394223 UHRF1BP1LA0JNW5 1464 aa24.52■■□□□ 1.52
NDUFC1-201ENST00000394223 ABCC2Q92887 1545 aa24.51■■□□□ 1.51
NDUFC1-201ENST00000394223 CLIP1P30622 1438 aa24.5■■□□□ 1.51
NDUFC1-201ENST00000394223 ABCA8O94911 1581 aa24.48■■□□□ 1.51
NDUFC1-201ENST00000394223 PLB1Q6P1J6 1458 aa24.48■■□□□ 1.51
NDUFC1-201ENST00000394223 NPM1P06748 294 aaKnown RBP eCLIP24.47■■□□□ 1.51
NDUFC1-201ENST00000394223 CEP162Q5TB80 1403 aa24.45■■□□□ 1.51
NDUFC1-201ENST00000394223 FMN1Q68DA7 1419 aa24.44■■□□□ 1.5
NDUFC1-201ENST00000394223 RAPGEF6Q8TEU7 1601 aa24.42■■□□□ 1.5
NDUFC1-201ENST00000394223 KDM5BQ9UGL1 1544 aa24.4■■□□□ 1.5
NDUFC1-201ENST00000394223 MAPKBP1O60336 1514 aa24.36■■□□□ 1.49
NDUFC1-201ENST00000394223 ZCCHC11Q5TAX3 1644 aaKnown RBP24.34■■□□□ 1.49
NDUFC1-201ENST00000394223 NUP153P49790 1475 aaKnown RBP24.31■■□□□ 1.48
NDUFC1-201ENST00000394223 HECW1Q76N89 1606 aa24.29■■□□□ 1.48
NDUFC1-201ENST00000394223 ATP10BO94823 1461 aa24.26■■□□□ 1.47
NDUFC1-201ENST00000394223 ASXL2Q76L83 1435 aa24.26■■□□□ 1.47
NDUFC1-201ENST00000394223 CASKIN1Q8WXD9 1431 aa24.26■■□□□ 1.47
NDUFC1-201ENST00000394223 PCF11O94913 1555 aaKnown RBP24.24■■□□□ 1.47
NDUFC1-201ENST00000394223 TRHP20396 242 aaPredicted RBP24.23■■□□□ 1.47
NDUFC1-201ENST00000394223 FYCO1Q9BQS8 1478 aa24.23■■□□□ 1.47
NDUFC1-201ENST00000394223 ARID3CA6NKF2 412 aa24.22■■□□□ 1.47
NDUFC1-201ENST00000394223 ATP1B4Q9UN42 357 aaPredicted RBP24.22■■□□□ 1.47
NDUFC1-201ENST00000394223 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.21■■□□□ 1.47
NDUFC1-201ENST00000394223 HNRNPUL2Q1KMD3 747 aaKnown RBP24.21■■□□□ 1.47
NDUFC1-201ENST00000394223 ABCC10Q5T3U5 1492 aa24.19■■□□□ 1.46
NDUFC1-201ENST00000394223 WDR7Q9Y4E6 1490 aa24.19■■□□□ 1.46
NDUFC1-201ENST00000394223 EPRSP07814 1512 aaKnown RBP24.19■■□□□ 1.46
NDUFC1-201ENST00000394223 DIP2BQ9P265 1576 aa24.17■■□□□ 1.46
NDUFC1-201ENST00000394223 CCDC18Q5T9S5 1454 aa24.16■■□□□ 1.46
NDUFC1-201ENST00000394223 VPS8Q8N3P4 1428 aa24.16■■□□□ 1.46
NDUFC1-201ENST00000394223 CDK13Q14004 1512 aaKnown RBP24.15■■□□□ 1.46
NDUFC1-201ENST00000394223 KIF13AQ9H1H9 1805 aa24.14■■□□□ 1.45
NDUFC1-201ENST00000394223 FAM69CQ0P6D2 419 aa24.12■■□□□ 1.45
NDUFC1-201ENST00000394223 PLEKHD1A6NEE1 506 aa24.11■■□□□ 1.45
NDUFC1-201ENST00000394223 CDK11AQ9UQ88 783 aaPredicted RBP24.11■■□□□ 1.45
NDUFC1-201ENST00000394223 LRRIQ1Q96JM4 1722 aa24.1■■□□□ 1.45
NDUFC1-201ENST00000394223 GLI2P10070 1586 aa24.1■■□□□ 1.45
NDUFC1-201ENST00000394223 KCNH8Q96L42 1107 aa24.06■■□□□ 1.44
NDUFC1-201ENST00000394223 TROQ12816 1431 aaPredicted RBP24■■□□□ 1.43
NDUFC1-201ENST00000394223 CFAP43Q8NDM7 1665 aa23.99■■□□□ 1.43
NDUFC1-201ENST00000394223 MAP3K4Q9Y6R4 1608 aa23.99■■□□□ 1.43
NDUFC1-201ENST00000394223 ABCA9Q8IUA7 1624 aa23.97■■□□□ 1.43
NDUFC1-201ENST00000394223 KIF14Q15058 1648 aa23.95■■□□□ 1.42
NDUFC1-201ENST00000394223 TIAM1Q13009 1591 aa23.94■■□□□ 1.42
NDUFC1-201ENST00000394223 CD109Q6YHK3 1445 aa23.93■■□□□ 1.42
NDUFC1-201ENST00000394223 TSPOAP1O95153 1857 aa23.93■■□□□ 1.42
NDUFC1-201ENST00000394223 MAP3K1Q13233 1512 aa23.93■■□□□ 1.42
NDUFC1-201ENST00000394223 MAGI3Q5TCQ9 1506 aa23.92■■□□□ 1.42
NDUFC1-201ENST00000394223 MTUS2Q5JR59 1369 aa23.91■■□□□ 1.42
NDUFC1-201ENST00000394223 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.91■■□□□ 1.425e-15■□□□□ 8.6
NDUFC1-201ENST00000394223 APLP2Q06481 763 aa23.91■■□□□ 1.42
NDUFC1-201ENST00000394223 TEX14Q8IWB6 1497 aa23.9■■□□□ 1.42
NDUFC1-201ENST00000394223 EHBP1L1Q8N3D4 1523 aa23.89■■□□□ 1.42
NDUFC1-201ENST00000394223 PPRC1Q5VV67 1664 aaKnown RBP23.88■■□□□ 1.41
NDUFC1-201ENST00000394223 TTC37Q6PGP7 1564 aa23.87■■□□□ 1.41
NDUFC1-201ENST00000394223 LRRC9Q6ZRR7 1453 aa23.82■■□□□ 1.4
NDUFC1-201ENST00000394223 MYO5CQ9NQX4 1742 aa23.81■■□□□ 1.4
NDUFC1-201ENST00000394223 ARAP3Q8WWN8 1544 aa23.79■■□□□ 1.4
NDUFC1-201ENST00000394223 PLCH2O75038 1416 aa23.78■■□□□ 1.4
NDUFC1-201ENST00000394223 SUPT6HQ7KZ85 1726 aaKnown RBP23.78■■□□□ 1.4
NDUFC1-201ENST00000394223 CFAP74Q9C0B2 1584 aa23.77■■□□□ 1.4
NDUFC1-201ENST00000394223 PHLDB1Q86UU1 1377 aa23.77■■□□□ 1.4
NDUFC1-201ENST00000394223 NEO1Q92859 1461 aa23.76■■□□□ 1.39
NDUFC1-201ENST00000394223 FANCAO15360 1455 aa23.74■■□□□ 1.39
NDUFC1-201ENST00000394223 PREX2Q70Z35 1606 aa23.73■■□□□ 1.39
NDUFC1-201ENST00000394223 KANK4Q5T7N3 995 aaPredicted RBP23.73■■□□□ 1.39
NDUFC1-201ENST00000394223 CCNB3Q8WWL7 1395 aa23.73■■□□□ 1.39
NDUFC1-201ENST00000394223 NCOA2Q15596 1464 aa23.72■■□□□ 1.39
NDUFC1-201ENST00000394223 KDM6BO15054 1643 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms