RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 WDR97A6NE52 1622 aa21.87■■□□□ 1.09
CDH16-202ENST00000394055 CUL7Q14999 1698 aa21.87■■□□□ 1.09
CDH16-202ENST00000394055 DIEXFQ68CQ4 756 aaKnown RBP21.86■■□□□ 1.09
CDH16-202ENST00000394055 CCNB3Q8WWL7 1395 aa21.85■■□□□ 1.09
CDH16-202ENST00000394055 PCF11O94913 1555 aaKnown RBP21.83■■□□□ 1.08
CDH16-202ENST00000394055 FHAD1B1AJZ9 1412 aa21.83■■□□□ 1.08
CDH16-202ENST00000394055 GAPVD1Q14C86 1478 aa21.82■■□□□ 1.08
CDH16-202ENST00000394055 ABCA5Q8WWZ7 1642 aa21.81■■□□□ 1.08
CDH16-202ENST00000394055 LRRC9Q6ZRR7 1453 aa21.79■■□□□ 1.08
CDH16-202ENST00000394055 CTTNBP2Q8WZ74 1663 aa21.79■■□□□ 1.08
CDH16-202ENST00000394055 ZNF316A6NFI3 1004 aaPredicted RBP21.79■■□□□ 1.08
CDH16-202ENST00000394055 MAP3K1Q13233 1512 aa21.78■■□□□ 1.08
CDH16-202ENST00000394055 DHX57Q6P158 1386 aaKnown RBP21.77■■□□□ 1.08
CDH16-202ENST00000394055 SCAF1Q9H7N4 1312 aaKnown RBP21.75■■□□□ 1.07
CDH16-202ENST00000394055 EFCAB5A4FU69 1503 aa21.75■■□□□ 1.07
CDH16-202ENST00000394055 PHLDB1Q86UU1 1377 aa21.73■■□□□ 1.07
CDH16-202ENST00000394055 CFAP43Q8NDM7 1665 aa21.71■■□□□ 1.07
CDH16-202ENST00000394055 TARBP1Q13395 1621 aaKnown RBP21.71■■□□□ 1.07
CDH16-202ENST00000394055 FAM50AQ14320 339 aaKnown RBP21.69■■□□□ 1.06
CDH16-202ENST00000394055 FYCO1Q9BQS8 1478 aa21.69■■□□□ 1.06
CDH16-202ENST00000394055 CASKIN1Q8WXD9 1431 aa21.68■■□□□ 1.06
CDH16-202ENST00000394055 AQRO60306 1485 aaKnown RBP eCLIP21.65■■□□□ 1.06
CDH16-202ENST00000394055 FMN1Q68DA7 1419 aa21.64■■□□□ 1.05
CDH16-202ENST00000394055 MRC2Q9UBG0 1479 aa21.63■■□□□ 1.05
CDH16-202ENST00000394055 CLSPNQ9HAW4 1339 aa21.63■■□□□ 1.05
CDH16-202ENST00000394055 RAB3GAP2Q9H2M9 1393 aa21.62■■□□□ 1.05
CDH16-202ENST00000394055 SNAPC4Q5SXM2 1469 aa21.6■■□□□ 1.05
CDH16-202ENST00000394055 SAMD9Q5K651 1589 aa21.59■■□□□ 1.05
CDH16-202ENST00000394055 PBRM1Q86U86 1689 aa21.58■■□□□ 1.04
CDH16-202ENST00000394055 MTUS2Q5JR59 1369 aa21.54■■□□□ 1.04
CDH16-202ENST00000394055 SETD5Q9C0A6 1442 aa21.52■■□□□ 1.04
CDH16-202ENST00000394055 ZNF608Q9ULD9 1512 aaPredicted RBP21.52■■□□□ 1.04
CDH16-202ENST00000394055 ADAMTS12P58397 1594 aa21.5■■□□□ 1.03
CDH16-202ENST00000394055 LRRIQ1Q96JM4 1722 aa21.5■■□□□ 1.03
CDH16-202ENST00000394055 GRIN2BQ13224 1484 aa21.48■■□□□ 1.03
CDH16-202ENST00000394055 NEUROD1Q13562 356 aa21.45■■□□□ 1.02
CDH16-202ENST00000394055 MIER1Q8N108 512 aa21.45■■□□□ 1.02
CDH16-202ENST00000394055 FGD6Q6ZV73 1430 aa21.45■■□□□ 1.02
CDH16-202ENST00000394055 IQGAP2Q13576 1575 aa21.45■■□□□ 1.02
CDH16-202ENST00000394055 IFT140Q96RY7 1462 aa21.45■■□□□ 1.02
CDH16-202ENST00000394055 MAPKBP1O60336 1514 aa21.44■■□□□ 1.02
CDH16-202ENST00000394055 WDR62O43379 1518 aa21.44■■□□□ 1.02
CDH16-202ENST00000394055 ERCC6Q03468 1493 aa21.42■■□□□ 1.02
CDH16-202ENST00000394055 ARID3CA6NKF2 412 aa21.42■■□□□ 1.02
CDH16-202ENST00000394055 ACIN1Q9UKV3 1341 aaKnown RBP21.42■■□□□ 1.02
CDH16-202ENST00000394055 NCOA2Q15596 1464 aa21.4■■□□□ 1.02
CDH16-202ENST00000394055 YTHDC1Q96MU7 727 aaKnown RBP21.38■■□□□ 1.01
CDH16-202ENST00000394055 THOC2Q8NI27 1593 aaKnown RBP21.38■■□□□ 1.01
CDH16-202ENST00000394055 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.37■■□□□ 1.01
CDH16-202ENST00000394055 CENPBP07199 599 aaPredicted RBP21.36■■□□□ 1.01
CDH16-202ENST00000394055 SIN3AQ96ST3 1273 aa21.36■■□□□ 1.01
CDH16-202ENST00000394055 MAGI3Q5TCQ9 1506 aa21.36■■□□□ 1.01
CDH16-202ENST00000394055 EHBP1L1Q8N3D4 1523 aa21.35■■□□□ 1.01
CDH16-202ENST00000394055 MYOM3Q5VTT5 1437 aa21.34■■□□□ 1.01
CDH16-202ENST00000394055 SUPT6HQ7KZ85 1726 aaKnown RBP21.34■■□□□ 1.01
CDH16-202ENST00000394055 EIF4G3O43432 1585 aaKnown RBP21.33■■□□□ 1.01
CDH16-202ENST00000394055 PTPRKQ15262 1439 aa21.33■■□□□ 1.01
CDH16-202ENST00000394055 HECW1Q76N89 1606 aa21.31■■□□□ 1
CDH16-202ENST00000394055 CCDC18Q5T9S5 1454 aa21.31■■□□□ 1
CDH16-202ENST00000394055 CDK13Q14004 1512 aaKnown RBP21.31■■□□□ 1
CDH16-202ENST00000394055 EPRSP07814 1512 aaKnown RBP21.29■■□□□ 1
CDH16-202ENST00000394055 UGGT2Q9NYU1 1516 aa21.28■■□□□ 1
CDH16-202ENST00000394055 GRIN2AQ12879 1464 aa21.27■■□□□ 1
CDH16-202ENST00000394055 KIAA0586Q9BVV6 1533 aa21.26■□□□□ 0.99
CDH16-202ENST00000394055 FBLN2P98095 1184 aa21.26■□□□□ 0.99
CDH16-202ENST00000394055 PTPN23Q9H3S7 1636 aa21.24■□□□□ 0.99
CDH16-202ENST00000394055 ARHGEF11O15085 1522 aa21.23■□□□□ 0.99
CDH16-202ENST00000394055 CHMP7Q8WUX9 453 aaPredicted RBP21.23■□□□□ 0.99
CDH16-202ENST00000394055 DISP1Q96F81 1524 aa21.23■□□□□ 0.99
CDH16-202ENST00000394055 HFM1A2PYH4 1435 aa21.22■□□□□ 0.99
CDH16-202ENST00000394055 CHIC2Q9UKJ5 165 aa21.22■□□□□ 0.99
CDH16-202ENST00000394055 KIAA0556O60303 1618 aa21.22■□□□□ 0.99
CDH16-202ENST00000394055 NAIPQ13075 1403 aa21.19■□□□□ 0.98
CDH16-202ENST00000394055 RRP7BPQ9NSQ0 103 aa21.19■□□□□ 0.98
CDH16-202ENST00000394055 GTF3C3Q9Y5Q9 886 aa21.19■□□□□ 0.98
CDH16-202ENST00000394055 MAGI1Q96QZ7 1491 aaPredicted RBP21.16■□□□□ 0.98
CDH16-202ENST00000394055 UACAQ9BZF9 1416 aa21.14■□□□□ 0.97
CDH16-202ENST00000394055 CEP170Q5SW79 1584 aa21.14■□□□□ 0.97
CDH16-202ENST00000394055 SYNJ2O15056 1496 aa21.14■□□□□ 0.97
CDH16-202ENST00000394055 NUP153P49790 1475 aaKnown RBP21.13■□□□□ 0.97
CDH16-202ENST00000394055 TCOF1Q13428 1488 aaKnown RBP21.13■□□□□ 0.97
CDH16-202ENST00000394055 RAPGEF6Q8TEU7 1601 aa21.1■□□□□ 0.97
CDH16-202ENST00000394055 PPP1R15AO75807 674 aaPredicted RBP21.07■□□□□ 0.96
CDH16-202ENST00000394055 TIMELESSQ9UNS1 1208 aa21.07■□□□□ 0.96
CDH16-202ENST00000394055 MIA2Q96PC5 1412 aa21.07■□□□□ 0.96
CDH16-202ENST00000394055 HIRIP3Q9BW71 556 aaPredicted RBP21.07■□□□□ 0.96
CDH16-202ENST00000394055 TONSLQ96HA7 1378 aa21.06■□□□□ 0.96
CDH16-202ENST00000394055 PLB1Q6P1J6 1458 aa21.06■□□□□ 0.96
CDH16-202ENST00000394055 TRIM52Q96A61 297 aa21.05■□□□□ 0.96
CDH16-202ENST00000394055 JPH4Q96JJ6 628 aa21.05■□□□□ 0.96
CDH16-202ENST00000394055 ZNF644Q9H582 1327 aaPredicted RBP21.05■□□□□ 0.96
CDH16-202ENST00000394055 CDK11AQ9UQ88 783 aaPredicted RBP21.03■□□□□ 0.96
CDH16-202ENST00000394055 KDM6BO15054 1643 aa21.03■□□□□ 0.96
CDH16-202ENST00000394055 PRG4Q92954 1404 aaPredicted RBP21.02■□□□□ 0.96
CDH16-202ENST00000394055 NUP160Q12769 1436 aa21.01■□□□□ 0.95
CDH16-202ENST00000394055 GCC2Q8IWJ2 1684 aa21■□□□□ 0.95
CDH16-202ENST00000394055 CARMIL2Q6F5E8 1435 aa20.99■□□□□ 0.95
CDH16-202ENST00000394055 DDX10Q13206 875 aaKnown RBP20.99■□□□□ 0.95
CDH16-202ENST00000394055 DAPK1P53355 1430 aa20.97■□□□□ 0.95
CDH16-202ENST00000394055 AKNAQ7Z591 1439 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms