RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 VPS8Q8N3P4 1428 aa14.77□□□□□ -0.04
MTHFD2-201ENST00000394053 KANK4Q5T7N3 995 aaPredicted RBP14.76□□□□□ -0.05
MTHFD2-201ENST00000394053 KDM2AQ9Y2K7 1162 aa14.76□□□□□ -0.05
MTHFD2-201ENST00000394053 HIRIP3Q9BW71 556 aaPredicted RBP14.74□□□□□ -0.05
MTHFD2-201ENST00000394053 NCAPD3P42695 1498 aa14.74□□□□□ -0.05
MTHFD2-201ENST00000394053 FANCD2Q9BXW9 1451 aa14.73□□□□□ -0.05
MTHFD2-201ENST00000394053 STAG3Q9UJ98 1225 aa14.73□□□□□ -0.05
MTHFD2-201ENST00000394053 GTF3C3Q9Y5Q9 886 aa14.73□□□□□ -0.05
MTHFD2-201ENST00000394053 CCNB3Q8WWL7 1395 aa14.72□□□□□ -0.05
MTHFD2-201ENST00000394053 RAPGEF2Q9Y4G8 1499 aa14.72□□□□□ -0.05
MTHFD2-201ENST00000394053 PLPPR3Q6T4P5 718 aa14.71□□□□□ -0.06
MTHFD2-201ENST00000394053 SIN3AQ96ST3 1273 aa14.65□□□□□ -0.06
MTHFD2-201ENST00000394053 RGL3Q3MIN7 710 aa14.64□□□□□ -0.07
MTHFD2-201ENST00000394053 ACIN1Q9UKV3 1341 aaKnown RBP14.63□□□□□ -0.07
MTHFD2-201ENST00000394053 EIF4G2P78344 907 aaKnown RBP eCLIP14.61□□□□□ -0.07
MTHFD2-201ENST00000394053 FMN1Q68DA7 1419 aa14.61□□□□□ -0.07
MTHFD2-201ENST00000394053 CARMIL2Q6F5E8 1435 aa14.6□□□□□ -0.07
MTHFD2-201ENST00000394053 MIER1Q8N108 512 aa14.6□□□□□ -0.07
MTHFD2-201ENST00000394053 FHOD3Q2V2M9 1422 aa14.6□□□□□ -0.07
MTHFD2-201ENST00000394053 JPH4Q96JJ6 628 aa14.58□□□□□ -0.08
MTHFD2-201ENST00000394053 IGF1RP08069 1367 aa14.58□□□□□ -0.08
MTHFD2-201ENST00000394053 FGD5Q6ZNL6 1462 aa14.58□□□□□ -0.08
MTHFD2-201ENST00000394053 FAM9BQ8IZU0 186 aa14.58□□□□□ -0.08
MTHFD2-201ENST00000394053 SENP3Q9H4L4 574 aaPredicted RBP14.56□□□□□ -0.08
MTHFD2-201ENST00000394053 HNRNPUQ00839 825 aaKnown RBP eCLIP14.56□□□□□ -0.08
MTHFD2-201ENST00000394053 RAD54L2Q9Y4B4 1467 aa14.55□□□□□ -0.08
MTHFD2-201ENST00000394053 DAXXQ9UER7 740 aaPredicted RBP14.55□□□□□ -0.08
MTHFD2-201ENST00000394053 ARHGAP35Q9NRY4 1499 aa14.55□□□□□ -0.08
MTHFD2-201ENST00000394053 CLSPNQ9HAW4 1339 aa14.54□□□□□ -0.08
MTHFD2-201ENST00000394053 NEFMP07197 916 aa14.51□□□□□ -0.09
MTHFD2-201ENST00000394053 TMC1Q8TDI8 760 aa14.51□□□□□ -0.09
MTHFD2-201ENST00000394053 CFTRP13569 1480 aa14.51□□□□□ -0.09
MTHFD2-201ENST00000394053 BICRAQ9NZM4 1560 aa14.51□□□□□ -0.09
MTHFD2-201ENST00000394053 SETD5Q9C0A6 1442 aa14.5□□□□□ -0.09
MTHFD2-201ENST00000394053 SALL2Q9Y467 1007 aaPredicted RBP14.49□□□□□ -0.09
MTHFD2-201ENST00000394053 MRS2Q9HD23 443 aa14.49□□□□□ -0.09
MTHFD2-201ENST00000394053 GAPVD1Q14C86 1478 aa14.49□□□□□ -0.09
MTHFD2-201ENST00000394053 NESP48681 1621 aa14.48□□□□□ -0.09
MTHFD2-201ENST00000394053 CC2D2AQ9P2K1 1620 aa14.46□□□□□ -0.09
MTHFD2-201ENST00000394053 SLC24A1O60721 1099 aa14.45□□□□□ -0.1
MTHFD2-201ENST00000394053 CARD11Q9BXL7 1154 aa14.45□□□□□ -0.1
MTHFD2-201ENST00000394053 ARID4BQ4LE39 1312 aaPredicted RBP14.45□□□□□ -0.1
MTHFD2-201ENST00000394053 RAB3GAP2Q9H2M9 1393 aa14.45□□□□□ -0.1
MTHFD2-201ENST00000394053 FOXD1Q16676 465 aa14.44□□□□□ -0.1
MTHFD2-201ENST00000394053 CANXP27824 592 aaKnown RBP14.44□□□□□ -0.1
MTHFD2-201ENST00000394053 AQRO60306 1485 aaKnown RBP eCLIP14.43□□□□□ -0.19e-8■■■■■ 30.5
MTHFD2-201ENST00000394053 HMGXB3Q12766 1538 aa14.42□□□□□ -0.1
MTHFD2-201ENST00000394053 SYNJ1O43426 1573 aa14.42□□□□□ -0.1
MTHFD2-201ENST00000394053 PPP1R15AO75807 674 aaPredicted RBP14.42□□□□□ -0.1
MTHFD2-201ENST00000394053 EFCAB2Q5VUJ9 269 aa14.42□□□□□ -0.1
MTHFD2-201ENST00000394053 DNAJC5BQ9UF47 199 aa14.42□□□□□ -0.1
MTHFD2-201ENST00000394053 PKD2Q13563 968 aa14.41□□□□□ -0.1
MTHFD2-201ENST00000394053 FKBP8Q14318 412 aa14.41□□□□□ -0.1
MTHFD2-201ENST00000394053 TIMELESSQ9UNS1 1208 aa14.4□□□□□ -0.1
MTHFD2-201ENST00000394053 DCAF11Q8TEB1 546 aa14.4□□□□□ -0.1
MTHFD2-201ENST00000394053 HNRNPMP52272 730 aaKnown RBP eCLIP14.39□□□□□ -0.11
MTHFD2-201ENST00000394053 MPHOSPH9Q99550 1183 aa14.38□□□□□ -0.11
MTHFD2-201ENST00000394053 GGT6Q6P531 493 aa14.37□□□□□ -0.11
MTHFD2-201ENST00000394053 PTPRGP23470 1445 aa14.35□□□□□ -0.11
MTHFD2-201ENST00000394053 BCL11AQ9H165 835 aa14.35□□□□□ -0.11
MTHFD2-201ENST00000394053 WDR43Q15061 677 aaKnown RBP eCLIP14.35□□□□□ -0.11
MTHFD2-201ENST00000394053 CCDC18Q5T9S5 1454 aa14.35□□□□□ -0.11
MTHFD2-201ENST00000394053 NUP155O75694 1391 aa14.34□□□□□ -0.11
MTHFD2-201ENST00000394053 ANKRD30AQ9BXX3 1397 aa14.33□□□□□ -0.12
MTHFD2-201ENST00000394053 MLECQ14165 292 aa14.33□□□□□ -0.12
MTHFD2-201ENST00000394053 TRHP20396 242 aaPredicted RBP14.33□□□□□ -0.12
MTHFD2-201ENST00000394053 CUX1P39880 1505 aa14.32□□□□□ -0.12
MTHFD2-201ENST00000394053 KANK1Q14678 1352 aa14.31□□□□□ -0.12
MTHFD2-201ENST00000394053 ZBTB47Q9UFB7 747 aaPredicted RBP14.31□□□□□ -0.12
MTHFD2-201ENST00000394053 SENP3-EIF4A1A0A087X0R7 540 aa14.31□□□□□ -0.12
MTHFD2-201ENST00000394053 CDCA8Q53HL2 280 aa14.31□□□□□ -0.12
MTHFD2-201ENST00000394053 TOPBP1Q92547 1522 aa14.3□□□□□ -0.12
MTHFD2-201ENST00000394053 KIF21BO75037 1637 aa14.29□□□□□ -0.12
MTHFD2-201ENST00000394053 RSPH4AQ5TD94 716 aa14.29□□□□□ -0.12
MTHFD2-201ENST00000394053 KNSTRNQ9Y448 316 aa14.29□□□□□ -0.12
MTHFD2-201ENST00000394053 TOP2BQ02880 1626 aa14.28□□□□□ -0.12
MTHFD2-201ENST00000394053 POLA1P09884 1462 aaPredicted RBP14.28□□□□□ -0.12
MTHFD2-201ENST00000394053 OSCARQ8IYS5 282 aa14.28□□□□□ -0.12
MTHFD2-201ENST00000394053 KIF3BO15066 747 aa14.27□□□□□ -0.12
MTHFD2-201ENST00000394053 GRIN2BQ13224 1484 aa14.27□□□□□ -0.13
MTHFD2-201ENST00000394053 PRXQ9BXM0 1461 aa14.26□□□□□ -0.13
MTHFD2-201ENST00000394053 SPAG9O60271 1321 aaKnown RBP14.26□□□□□ -0.13
MTHFD2-201ENST00000394053 HSPA5P11021 654 aaKnown RBP14.25□□□□□ -0.13
MTHFD2-201ENST00000394053 CYB5RLQ6IPT4 315 aa14.25□□□□□ -0.13
MTHFD2-201ENST00000394053 ARAP1Q96P48 1450 aa14.25□□□□□ -0.13
MTHFD2-201ENST00000394053 L3MBTL2Q969R5 705 aa14.24□□□□□ -0.13
MTHFD2-201ENST00000394053 UNC13AQ9UPW8 1703 aa14.24□□□□□ -0.13
MTHFD2-201ENST00000394053 POGKQ9P215 609 aa14.24□□□□□ -0.13
MTHFD2-201ENST00000394053 MRC2Q9UBG0 1479 aa14.24□□□□□ -0.13
MTHFD2-201ENST00000394053 IRX6P78412 446 aaPredicted RBP14.23□□□□□ -0.13
MTHFD2-201ENST00000394053 ERICH3Q5RHP9 1530 aa14.23□□□□□ -0.13
MTHFD2-201ENST00000394053 DHX57Q6P158 1386 aaKnown RBP14.23□□□□□ -0.13
MTHFD2-201ENST00000394053 PLEKHG5O94827 1062 aa14.22□□□□□ -0.13
MTHFD2-201ENST00000394053 ZNF644Q9H582 1327 aaPredicted RBP14.22□□□□□ -0.13
MTHFD2-201ENST00000394053 C14orf37Q86TY3 774 aa14.21□□□□□ -0.13
MTHFD2-201ENST00000394053 PHLDB1Q86UU1 1377 aa14.2□□□□□ -0.14
MTHFD2-201ENST00000394053 TMF1P82094 1093 aa14.2□□□□□ -0.14
MTHFD2-201ENST00000394053 SCAF1Q9H7N4 1312 aaKnown RBP14.2□□□□□ -0.14
MTHFD2-201ENST00000394053 PEG3Q9GZU2 1588 aa14.19□□□□□ -0.14
MTHFD2-201ENST00000394053 CC2D1BQ5T0F9 858 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms