RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 FHOD3Q2V2M9 1422 aa20.39■□□□□ 0.85
CCDC142-202ENST00000393965 PELP1Q8IZL8 1130 aaKnown RBP20.37■□□□□ 0.85
CCDC142-202ENST00000393965 LAMC3Q9Y6N6 1575 aa20.37■□□□□ 0.85
CCDC142-202ENST00000393965 RRBP1Q9P2E9 1410 aaKnown RBP20.36■□□□□ 0.85
CCDC142-202ENST00000393965 TIAM1Q13009 1591 aa20.35■□□□□ 0.85
CCDC142-202ENST00000393965 PCF11O94913 1555 aaKnown RBP20.35■□□□□ 0.85
CCDC142-202ENST00000393965 ZNF316A6NFI3 1004 aaPredicted RBP20.35■□□□□ 0.85
CCDC142-202ENST00000393965 DHX57Q6P158 1386 aaKnown RBP20.35■□□□□ 0.85
CCDC142-202ENST00000393965 WDR97A6NE52 1622 aa20.34■□□□□ 0.85
CCDC142-202ENST00000393965 CCNB3Q8WWL7 1395 aa20.32■□□□□ 0.84
CCDC142-202ENST00000393965 PHLDB1Q86UU1 1377 aa20.3■□□□□ 0.84
CCDC142-202ENST00000393965 LRRC9Q6ZRR7 1453 aa20.27■□□□□ 0.84
CCDC142-202ENST00000393965 CTTNBP2Q8WZ74 1663 aa20.27■□□□□ 0.83
CCDC142-202ENST00000393965 PDS5BQ9NTI5 1447 aa20.26■□□□□ 0.83
CCDC142-202ENST00000393965 ABCA5Q8WWZ7 1642 aa20.25■□□□□ 0.83
CCDC142-202ENST00000393965 CUL7Q14999 1698 aa20.25■□□□□ 0.83
CCDC142-202ENST00000393965 MIER1Q8N108 512 aa20.24■□□□□ 0.83
CCDC142-202ENST00000393965 GAPVD1Q14C86 1478 aa20.22■□□□□ 0.83
CCDC142-202ENST00000393965 FAM50AQ14320 339 aaKnown RBP20.21■□□□□ 0.83
CCDC142-202ENST00000393965 CFAP43Q8NDM7 1665 aa20.2■□□□□ 0.82
CCDC142-202ENST00000393965 FHAD1B1AJZ9 1412 aa20.17■□□□□ 0.82
CCDC142-202ENST00000393965 LRRIQ1Q96JM4 1722 aa20.17■□□□□ 0.82
CCDC142-202ENST00000393965 RAB3GAP2Q9H2M9 1393 aa20.17■□□□□ 0.82
CCDC142-202ENST00000393965 TARBP1Q13395 1621 aaKnown RBP20.17■□□□□ 0.82
CCDC142-202ENST00000393965 AQRO60306 1485 aaKnown RBP eCLIP20.16■□□□□ 0.825e-7■■■□□ 17.7
CCDC142-202ENST00000393965 MAP3K1Q13233 1512 aa20.15■□□□□ 0.82
CCDC142-202ENST00000393965 EFCAB5A4FU69 1503 aa20.11■□□□□ 0.81
CCDC142-202ENST00000393965 SNAPC4Q5SXM2 1469 aa20.11■□□□□ 0.81
CCDC142-202ENST00000393965 CASKIN1Q8WXD9 1431 aa20.1■□□□□ 0.81
CCDC142-202ENST00000393965 FYCO1Q9BQS8 1478 aa20.1■□□□□ 0.81
CCDC142-202ENST00000393965 MAPKBP1O60336 1514 aa20.07■□□□□ 0.8
CCDC142-202ENST00000393965 ARID3CA6NKF2 412 aa20.07■□□□□ 0.8
CCDC142-202ENST00000393965 PBRM1Q86U86 1689 aa20.07■□□□□ 0.8
CCDC142-202ENST00000393965 SAMD9Q5K651 1589 aa20.06■□□□□ 0.8
CCDC142-202ENST00000393965 ZNF608Q9ULD9 1512 aaPredicted RBP20.05■□□□□ 0.8
CCDC142-202ENST00000393965 SIN3AQ96ST3 1273 aa20.04■□□□□ 0.8
CCDC142-202ENST00000393965 SETD5Q9C0A6 1442 aa20.02■□□□□ 0.8
CCDC142-202ENST00000393965 CLSPNQ9HAW4 1339 aa20.01■□□□□ 0.79
CCDC142-202ENST00000393965 FMN1Q68DA7 1419 aa20.01■□□□□ 0.79
CCDC142-202ENST00000393965 MRC2Q9UBG0 1479 aa19.99■□□□□ 0.79
CCDC142-202ENST00000393965 MTUS2Q5JR59 1369 aa19.98■□□□□ 0.79
CCDC142-202ENST00000393965 MAGI3Q5TCQ9 1506 aa19.98■□□□□ 0.79
CCDC142-202ENST00000393965 GRIN2BQ13224 1484 aa19.97■□□□□ 0.79
CCDC142-202ENST00000393965 PTPRKQ15262 1439 aa19.97■□□□□ 0.79
CCDC142-202ENST00000393965 ERCC6Q03468 1493 aa19.95■□□□□ 0.78
CCDC142-202ENST00000393965 FGD6Q6ZV73 1430 aa19.94■□□□□ 0.78
CCDC142-202ENST00000393965 ADAMTS12P58397 1594 aa19.94■□□□□ 0.78
CCDC142-202ENST00000393965 BCANQ96GW7 911 aa19.94■□□□□ 0.78
CCDC142-202ENST00000393965 NCOA2Q15596 1464 aa19.91■□□□□ 0.78
CCDC142-202ENST00000393965 IQGAP2Q13576 1575 aa19.89■□□□□ 0.77
CCDC142-202ENST00000393965 CDK13Q14004 1512 aaKnown RBP19.88■□□□□ 0.77
CCDC142-202ENST00000393965 FBLN2P98095 1184 aa19.86■□□□□ 0.77
CCDC142-202ENST00000393965 HIRIP3Q9BW71 556 aaPredicted RBP19.85■□□□□ 0.77
CCDC142-202ENST00000393965 CHIC2Q9UKJ5 165 aa19.84■□□□□ 0.77
CCDC142-202ENST00000393965 WDR62O43379 1518 aa19.83■□□□□ 0.77
CCDC142-202ENST00000393965 SUPT6HQ7KZ85 1726 aaKnown RBP19.82■□□□□ 0.76
CCDC142-202ENST00000393965 MYOM3Q5VTT5 1437 aa19.82■□□□□ 0.76
CCDC142-202ENST00000393965 EIF4G3O43432 1585 aaKnown RBP19.81■□□□□ 0.76
CCDC142-202ENST00000393965 IFT140Q96RY7 1462 aa19.79■□□□□ 0.76
CCDC142-202ENST00000393965 RRP7BPQ9NSQ0 103 aa19.79■□□□□ 0.76
CCDC142-202ENST00000393965 EPRSP07814 1512 aaKnown RBP19.79■□□□□ 0.76
CCDC142-202ENST00000393965 UGGT2Q9NYU1 1516 aa19.79■□□□□ 0.76
CCDC142-202ENST00000393965 CCDC18Q5T9S5 1454 aa19.78■□□□□ 0.76
CCDC142-202ENST00000393965 PTPN23Q9H3S7 1636 aa19.78■□□□□ 0.76
CCDC142-202ENST00000393965 EHBP1L1Q8N3D4 1523 aa19.78■□□□□ 0.76
CCDC142-202ENST00000393965 THOC2Q8NI27 1593 aaKnown RBP19.78■□□□□ 0.76
CCDC142-202ENST00000393965 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.77■□□□□ 0.75
CCDC142-202ENST00000393965 KCNH8Q96L42 1107 aa19.75■□□□□ 0.75
CCDC142-202ENST00000393965 HECW1Q76N89 1606 aa19.75■□□□□ 0.75
CCDC142-202ENST00000393965 ARHGEF11O15085 1522 aa19.74■□□□□ 0.75
CCDC142-202ENST00000393965 NAIPQ13075 1403 aa19.74■□□□□ 0.75
CCDC142-202ENST00000393965 DISP1Q96F81 1524 aa19.74■□□□□ 0.75
CCDC142-202ENST00000393965 KDM6BO15054 1643 aa19.74■□□□□ 0.75
CCDC142-202ENST00000393965 HFM1A2PYH4 1435 aa19.72■□□□□ 0.75
CCDC142-202ENST00000393965 GRIN2AQ12879 1464 aa19.71■□□□□ 0.75
CCDC142-202ENST00000393965 KIAA0556O60303 1618 aa19.7■□□□□ 0.74
CCDC142-202ENST00000393965 ZNF644Q9H582 1327 aaPredicted RBP19.69■□□□□ 0.74
CCDC142-202ENST00000393965 CHMP7Q8WUX9 453 aaPredicted RBP19.69■□□□□ 0.74
CCDC142-202ENST00000393965 CEP170Q5SW79 1584 aa19.67■□□□□ 0.74
CCDC142-202ENST00000393965 KIAA0586Q9BVV6 1533 aa19.67■□□□□ 0.74
CCDC142-202ENST00000393965 DDX10Q13206 875 aaKnown RBP19.66■□□□□ 0.74
CCDC142-202ENST00000393965 PPP1R15AO75807 674 aaPredicted RBP19.65■□□□□ 0.74
CCDC142-202ENST00000393965 NUP153P49790 1475 aaKnown RBP19.65■□□□□ 0.74
CCDC142-202ENST00000393965 FOXD1Q16676 465 aa19.64■□□□□ 0.74
CCDC142-202ENST00000393965 UACAQ9BZF9 1416 aa19.64■□□□□ 0.73
CCDC142-202ENST00000393965 DENND4BO75064 1496 aaPredicted RBP19.64■□□□□ 0.73
CCDC142-202ENST00000393965 PLB1Q6P1J6 1458 aa19.62■□□□□ 0.73
CCDC142-202ENST00000393965 CNGB1Q14028 1251 aaPredicted RBP19.61■□□□□ 0.73
CCDC142-202ENST00000393965 TCOF1Q13428 1488 aaKnown RBP19.61■□□□□ 0.73
CCDC142-202ENST00000393965 TRIM52Q96A61 297 aa19.6■□□□□ 0.73
CCDC142-202ENST00000393965 RAPGEF6Q8TEU7 1601 aa19.6■□□□□ 0.73
CCDC142-202ENST00000393965 PRG4Q92954 1404 aaPredicted RBP19.58■□□□□ 0.73
CCDC142-202ENST00000393965 TONSLQ96HA7 1378 aa19.57■□□□□ 0.72
CCDC142-202ENST00000393965 GCC2Q8IWJ2 1684 aa19.56■□□□□ 0.72
CCDC142-202ENST00000393965 KDM5BQ9UGL1 1544 aa19.55■□□□□ 0.72
CCDC142-202ENST00000393965 SYNJ2O15056 1496 aa19.55■□□□□ 0.72
CCDC142-202ENST00000393965 MAGI1Q96QZ7 1491 aaPredicted RBP19.53■□□□□ 0.72
CCDC142-202ENST00000393965 SUPT16HQ9Y5B9 1047 aaKnown RBP19.53■□□□□ 0.72
CCDC142-202ENST00000393965 KIF14Q15058 1648 aa19.52■□□□□ 0.72
CCDC142-202ENST00000393965 JPH4Q96JJ6 628 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms