RNA–Protein interactions for RNA: ENST00000393780.3

GAP43-202, Transcript of growth associated protein 43, humanhuman

TSL 1 (best) BASIC

Gene GAP43, Length 1,901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43-202ENST00000393780 FHAD1B1AJZ9 1412 aa20.59■□□□□ 0.89
GAP43-202ENST00000393780 LRRC9Q6ZRR7 1453 aa20.58■□□□□ 0.89
GAP43-202ENST00000393780 ABCA10Q8WWZ4 1543 aa20.58■□□□□ 0.88
GAP43-202ENST00000393780 CUL7Q14999 1698 aa20.55■□□□□ 0.88
GAP43-202ENST00000393780 EFCAB5A4FU69 1503 aa20.55■□□□□ 0.88
GAP43-202ENST00000393780 PCF11O94913 1555 aaKnown RBP20.52■□□□□ 0.88
GAP43-202ENST00000393780 TOPBP1Q92547 1522 aa20.52■□□□□ 0.88
GAP43-202ENST00000393780 CTTNBP2Q8WZ74 1663 aa20.5■□□□□ 0.87
GAP43-202ENST00000393780 AQRO60306 1485 aaKnown RBP eCLIP20.5■□□□□ 0.87
GAP43-202ENST00000393780 POLA1P09884 1462 aaPredicted RBP20.49■□□□□ 0.87
GAP43-202ENST00000393780 FYCO1Q9BQS8 1478 aa20.48■□□□□ 0.87
GAP43-202ENST00000393780 RAB3GAP2Q9H2M9 1393 aa20.48■□□□□ 0.87
GAP43-202ENST00000393780 MAPKBP1O60336 1514 aa20.47■□□□□ 0.87
GAP43-202ENST00000393780 WDR97A6NE52 1622 aa20.47■□□□□ 0.87
GAP43-202ENST00000393780 SETD5Q9C0A6 1442 aa20.46■□□□□ 0.87
GAP43-202ENST00000393780 YTHDC1Q96MU7 727 aaKnown RBP20.45■□□□□ 0.86
GAP43-202ENST00000393780 PHLDB1Q86UU1 1377 aa20.44■□□□□ 0.86
GAP43-202ENST00000393780 RAD54L2Q9Y4B4 1467 aa20.44■□□□□ 0.86
GAP43-202ENST00000393780 CASKIN1Q8WXD9 1431 aa20.43■□□□□ 0.86
GAP43-202ENST00000393780 LAMC3Q9Y6N6 1575 aa20.42■□□□□ 0.86
GAP43-202ENST00000393780 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.42■□□□□ 0.86
GAP43-202ENST00000393780 FHOD3Q2V2M9 1422 aa20.37■□□□□ 0.85
GAP43-202ENST00000393780 ABCA5Q8WWZ7 1642 aa20.36■□□□□ 0.85
GAP43-202ENST00000393780 NESP48681 1621 aa20.35■□□□□ 0.85
GAP43-202ENST00000393780 ITGAEP38570 1179 aa20.35■□□□□ 0.85
GAP43-202ENST00000393780 FMN1Q68DA7 1419 aa20.34■□□□□ 0.85
GAP43-202ENST00000393780 SAMD9Q5K651 1589 aa20.33■□□□□ 0.85
GAP43-202ENST00000393780 URB2Q14146 1524 aaKnown RBP20.32■□□□□ 0.84
GAP43-202ENST00000393780 SNAPC4Q5SXM2 1469 aa20.31■□□□□ 0.84
GAP43-202ENST00000393780 TIMELESSQ9UNS1 1208 aa20.29■□□□□ 0.84
GAP43-202ENST00000393780 THOC2Q8NI27 1593 aaKnown RBP20.28■□□□□ 0.84
GAP43-202ENST00000393780 KIF21AQ7Z4S6 1674 aa20.27■□□□□ 0.84
GAP43-202ENST00000393780 P3H3Q8IVL6 736 aa20.26■□□□□ 0.83
GAP43-202ENST00000393780 FAM50AQ14320 339 aaKnown RBP20.25■□□□□ 0.83
GAP43-202ENST00000393780 FGD6Q6ZV73 1430 aa20.23■□□□□ 0.83
GAP43-202ENST00000393780 LRRIQ1Q96JM4 1722 aa20.22■□□□□ 0.83
GAP43-202ENST00000393780 GAPVD1Q14C86 1478 aa20.22■□□□□ 0.83
GAP43-202ENST00000393780 GRIN2BQ13224 1484 aa20.2■□□□□ 0.82
GAP43-202ENST00000393780 PDS5BQ9NTI5 1447 aa20.2■□□□□ 0.82
GAP43-202ENST00000393780 ATP1B4Q9UN42 357 aaPredicted RBP20.17■□□□□ 0.82
GAP43-202ENST00000393780 SUPT6HQ7KZ85 1726 aaKnown RBP20.16■□□□□ 0.82
GAP43-202ENST00000393780 EHBP1L1Q8N3D4 1523 aa20.16■□□□□ 0.82
GAP43-202ENST00000393780 TARBP1Q13395 1621 aaKnown RBP20.15■□□□□ 0.82
GAP43-202ENST00000393780 HFM1A2PYH4 1435 aa20.14■□□□□ 0.82
GAP43-202ENST00000393780 MTUS2Q5JR59 1369 aa20.13■□□□□ 0.81
GAP43-202ENST00000393780 PTPN23Q9H3S7 1636 aa20.13■□□□□ 0.81
GAP43-202ENST00000393780 TDRD9Q8NDG6 1382 aaKnown RBP20.13■□□□□ 0.81
GAP43-202ENST00000393780 SIN3AQ96ST3 1273 aa20.12■□□□□ 0.81
GAP43-202ENST00000393780 MYOM3Q5VTT5 1437 aa20.11■□□□□ 0.81
GAP43-202ENST00000393780 NCOA2Q15596 1464 aa20.11■□□□□ 0.81
GAP43-202ENST00000393780 CCDC18Q5T9S5 1454 aa20.11■□□□□ 0.81
GAP43-202ENST00000393780 ARHGEF11O15085 1522 aa20.11■□□□□ 0.81
GAP43-202ENST00000393780 UACAQ9BZF9 1416 aa20.1■□□□□ 0.81
GAP43-202ENST00000393780 PBRM1Q86U86 1689 aa20.09■□□□□ 0.81
GAP43-202ENST00000393780 UGGT2Q9NYU1 1516 aa20.08■□□□□ 0.81
GAP43-202ENST00000393780 PPP1R15AO75807 674 aaPredicted RBP20.08■□□□□ 0.8
GAP43-202ENST00000393780 PTPRKQ15262 1439 aa20.07■□□□□ 0.8
GAP43-202ENST00000393780 HECW1Q76N89 1606 aa20.04■□□□□ 0.8
GAP43-202ENST00000393780 TCOF1Q13428 1488 aaKnown RBP20.04■□□□□ 0.8
GAP43-202ENST00000393780 NAIPQ13075 1403 aa20.04■□□□□ 0.8
GAP43-202ENST00000393780 GCC2Q8IWJ2 1684 aa20.02■□□□□ 0.8
GAP43-202ENST00000393780 ADAMTS12P58397 1594 aa20.02■□□□□ 0.79
GAP43-202ENST00000393780 IQGAP2Q13576 1575 aa20■□□□□ 0.79
GAP43-202ENST00000393780 MAGI3Q5TCQ9 1506 aa20■□□□□ 0.79
GAP43-202ENST00000393780 SUPT16HQ9Y5B9 1047 aaKnown RBP20■□□□□ 0.79
GAP43-202ENST00000393780 AKNAQ7Z591 1439 aa19.99■□□□□ 0.79
GAP43-202ENST00000393780 TONSLQ96HA7 1378 aa19.97■□□□□ 0.79
GAP43-202ENST00000393780 DDX10Q13206 875 aaKnown RBP19.95■□□□□ 0.78
GAP43-202ENST00000393780 CCER2I3L3R5 266 aa19.94■□□□□ 0.78
GAP43-202ENST00000393780 MYT1Q01538 1121 aa19.94■□□□□ 0.78
GAP43-202ENST00000393780 WDR62O43379 1518 aa19.93■□□□□ 0.78
GAP43-202ENST00000393780 EPRSP07814 1512 aaKnown RBP19.93■□□□□ 0.78
GAP43-202ENST00000393780 KDM5BQ9UGL1 1544 aa19.93■□□□□ 0.78
GAP43-202ENST00000393780 MIA2Q96PC5 1412 aa19.92■□□□□ 0.78
GAP43-202ENST00000393780 MRC2Q9UBG0 1479 aa19.91■□□□□ 0.78
GAP43-202ENST00000393780 KCNH8Q96L42 1107 aa19.9■□□□□ 0.78
GAP43-202ENST00000393780 ANP32CO43423 234 aa19.84■□□□□ 0.77
GAP43-202ENST00000393780 DNAJC5BQ9UF47 199 aa19.83■□□□□ 0.77
GAP43-202ENST00000393780 DENND4BO75064 1496 aaPredicted RBP19.83■□□□□ 0.76
GAP43-202ENST00000393780 IFT140Q96RY7 1462 aa19.83■□□□□ 0.76
GAP43-202ENST00000393780 CDK13Q14004 1512 aaKnown RBP19.82■□□□□ 0.76
GAP43-202ENST00000393780 KIAA0556O60303 1618 aa19.8■□□□□ 0.76
GAP43-202ENST00000393780 KDM6BO15054 1643 aa19.79■□□□□ 0.76
GAP43-202ENST00000393780 KIAA0586Q9BVV6 1533 aa19.78■□□□□ 0.76
GAP43-202ENST00000393780 ROCK1Q13464 1354 aa19.78■□□□□ 0.76
GAP43-202ENST00000393780 DNMT1P26358 1616 aaKnown RBP19.76■□□□□ 0.75
GAP43-202ENST00000393780 HIRIP3Q9BW71 556 aaPredicted RBP19.76■□□□□ 0.75
GAP43-202ENST00000393780 DISP1Q96F81 1524 aa19.75■□□□□ 0.75
GAP43-202ENST00000393780 RRP7BPQ9NSQ0 103 aa19.74■□□□□ 0.75
GAP43-202ENST00000393780 RAPGEF6Q8TEU7 1601 aa19.74■□□□□ 0.75
GAP43-202ENST00000393780 DAPK1P53355 1430 aa19.72■□□□□ 0.75
GAP43-202ENST00000393780 ZNF608Q9ULD9 1512 aaPredicted RBP19.7■□□□□ 0.74
GAP43-202ENST00000393780 NUP153P49790 1475 aaKnown RBP19.7■□□□□ 0.74
GAP43-202ENST00000393780 CHIC2Q9UKJ5 165 aa19.69■□□□□ 0.74
GAP43-202ENST00000393780 MPHOSPH9Q99550 1183 aa19.68■□□□□ 0.74
GAP43-202ENST00000393780 GRIN2AQ12879 1464 aa19.68■□□□□ 0.74
GAP43-202ENST00000393780 ABCC5O15440 1437 aa19.67■□□□□ 0.74
GAP43-202ENST00000393780 EIF4G3O43432 1585 aaKnown RBP19.67■□□□□ 0.74
GAP43-202ENST00000393780 TRIM52Q96A61 297 aa19.66■□□□□ 0.74
GAP43-202ENST00000393780 TSHZ2Q9NRE2 1034 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms