RNA–Protein interactions for RNA: ENST00000393308.5

RAB43-205, Transcript of RAB43, member RAS oncogene family, humanhuman

APPRIS P1 TSL 4 BASIC

Gene RAB43, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43-205ENST00000393308 IFT140Q96RY7 1462 aa18.19■□□□□ 0.5
RAB43-205ENST00000393308 TRHP20396 242 aaPredicted RBP18.18■□□□□ 0.5
RAB43-205ENST00000393308 CYB5RLQ6IPT4 315 aa18.17■□□□□ 0.5
RAB43-205ENST00000393308 URB2Q14146 1524 aaKnown RBP18.15■□□□□ 0.5
RAB43-205ENST00000393308 BCL11AQ9H165 835 aa18.15■□□□□ 0.5
RAB43-205ENST00000393308 CARMIL1Q5VZK9 1371 aa18.14■□□□□ 0.49
RAB43-205ENST00000393308 MYT1LQ9UL68 1186 aa18.14■□□□□ 0.49
RAB43-205ENST00000393308 POLA1P09884 1462 aaPredicted RBP18.12■□□□□ 0.49
RAB43-205ENST00000393308 GAPVD1Q14C86 1478 aa18.12■□□□□ 0.49
RAB43-205ENST00000393308 DNMBPQ6XZF7 1577 aa18.09■□□□□ 0.49
RAB43-205ENST00000393308 TOP2BQ02880 1626 aa18.06■□□□□ 0.48
RAB43-205ENST00000393308 KIF21AQ7Z4S6 1674 aa18.06■□□□□ 0.48
RAB43-205ENST00000393308 JPH4Q96JJ6 628 aa18.04■□□□□ 0.48
RAB43-205ENST00000393308 CUX1P39880 1505 aa18.03■□□□□ 0.48
RAB43-205ENST00000393308 GRIN2BQ13224 1484 aa18.02■□□□□ 0.48
RAB43-205ENST00000393308 ZNF608Q9ULD9 1512 aaPredicted RBP18.02■□□□□ 0.47
RAB43-205ENST00000393308 DHX57Q6P158 1386 aaKnown RBP17.99■□□□□ 0.47
RAB43-205ENST00000393308 BIVM-ERCC5R4GMW8 1640 aa17.98■□□□□ 0.47
RAB43-205ENST00000393308 ARAP1Q96P48 1450 aa17.98■□□□□ 0.47
RAB43-205ENST00000393308 EIF5BO60841 1220 aaKnown RBP17.98■□□□□ 0.47
RAB43-205ENST00000393308 PRXQ9BXM0 1461 aa17.97■□□□□ 0.47
RAB43-205ENST00000393308 ERICH3Q5RHP9 1530 aa17.97■□□□□ 0.47
RAB43-205ENST00000393308 CLSPNQ9HAW4 1339 aa17.97■□□□□ 0.47
RAB43-205ENST00000393308 KCNH8Q96L42 1107 aa17.94■□□□□ 0.46
RAB43-205ENST00000393308 KANK4Q5T7N3 995 aaPredicted RBP17.94■□□□□ 0.46
RAB43-205ENST00000393308 SNAPC4Q5SXM2 1469 aa17.93■□□□□ 0.46
RAB43-205ENST00000393308 WDR62O43379 1518 aa17.92■□□□□ 0.46
RAB43-205ENST00000393308 CDK11AQ9UQ88 783 aaPredicted RBP17.91■□□□□ 0.46
RAB43-205ENST00000393308 IGF1RP08069 1367 aa17.91■□□□□ 0.46
RAB43-205ENST00000393308 CARMIL2Q6F5E8 1435 aa17.89■□□□□ 0.45
RAB43-205ENST00000393308 FHAD1B1AJZ9 1412 aa17.88■□□□□ 0.45
RAB43-205ENST00000393308 RRBP1Q9P2E9 1410 aaKnown RBP17.87■□□□□ 0.45
RAB43-205ENST00000393308 ABCA10Q8WWZ4 1543 aa17.82■□□□□ 0.44
RAB43-205ENST00000393308 DNAJC5Q9H3Z4 198 aa17.81■□□□□ 0.44
RAB43-205ENST00000393308 DAXXQ9UER7 740 aaPredicted RBP17.81■□□□□ 0.44
RAB43-205ENST00000393308 PLEKHD1A6NEE1 506 aa17.79■□□□□ 0.44
RAB43-205ENST00000393308 ARHGAP35Q9NRY4 1499 aa17.77■□□□□ 0.44
RAB43-205ENST00000393308 THOC2Q8NI27 1593 aaKnown RBP17.77■□□□□ 0.43
RAB43-205ENST00000393308 ZNF777Q9ULD5 760 aaPredicted RBP17.76■□□□□ 0.43
RAB43-205ENST00000393308 CCNB3Q8WWL7 1395 aa17.76■□□□□ 0.43
RAB43-205ENST00000393308 SYNJ2O15056 1496 aa17.76■□□□□ 0.43
RAB43-205ENST00000393308 MAGI1Q96QZ7 1491 aaPredicted RBP17.75■□□□□ 0.43
RAB43-205ENST00000393308 PTPRGP23470 1445 aa17.75■□□□□ 0.43
RAB43-205ENST00000393308 SUPT16HQ9Y5B9 1047 aaKnown RBP17.73■□□□□ 0.43
RAB43-205ENST00000393308 ITGAEP38570 1179 aa17.72■□□□□ 0.43
RAB43-205ENST00000393308 PRG4Q92954 1404 aaPredicted RBP17.71■□□□□ 0.43
RAB43-205ENST00000393308 MAPKBP1O60336 1514 aa17.66■□□□□ 0.42
RAB43-205ENST00000393308 RAB3GAP2Q9H2M9 1393 aa17.66■□□□□ 0.42
RAB43-205ENST00000393308 GRIN2AQ12879 1464 aa17.65■□□□□ 0.42
RAB43-205ENST00000393308 EIF4G3O43432 1585 aaKnown RBP17.64■□□□□ 0.41
RAB43-205ENST00000393308 PRDM2Q13029 1718 aa17.62■□□□□ 0.41
RAB43-205ENST00000393308 FAM69CQ0P6D2 419 aa17.62■□□□□ 0.41
RAB43-205ENST00000393308 TIAM1Q13009 1591 aa17.61■□□□□ 0.41
RAB43-205ENST00000393308 FAM50AQ14320 339 aaKnown RBP17.61■□□□□ 0.41
RAB43-205ENST00000393308 PLPPR3Q6T4P5 718 aa17.6■□□□□ 0.41
RAB43-205ENST00000393308 MAP3K1Q13233 1512 aa17.59■□□□□ 0.41
RAB43-205ENST00000393308 MTUS2Q5JR59 1369 aa17.57■□□□□ 0.4
RAB43-205ENST00000393308 SETD5Q9C0A6 1442 aa17.56■□□□□ 0.4
RAB43-205ENST00000393308 LRRC9Q6ZRR7 1453 aa17.55■□□□□ 0.4
RAB43-205ENST00000393308 PHLDB1Q86UU1 1377 aa17.54■□□□□ 0.4
RAB43-205ENST00000393308 KIAA0586Q9BVV6 1533 aa17.54■□□□□ 0.4
RAB43-205ENST00000393308 ESF1Q9H501 851 aaKnown RBP17.54■□□□□ 0.4
RAB43-205ENST00000393308 FHOD3Q2V2M9 1422 aa17.53■□□□□ 0.4
RAB43-205ENST00000393308 TSHZ2Q9NRE2 1034 aa17.52■□□□□ 0.39
RAB43-205ENST00000393308 WDR97A6NE52 1622 aa17.52■□□□□ 0.39
RAB43-205ENST00000393308 ARID4BQ4LE39 1312 aaPredicted RBP17.5■□□□□ 0.39
RAB43-205ENST00000393308 TARBP1Q13395 1621 aaKnown RBP17.5■□□□□ 0.39
RAB43-205ENST00000393308 SIN3AQ96ST3 1273 aa17.5■□□□□ 0.39
RAB43-205ENST00000393308 DDX10Q13206 875 aaKnown RBP17.46■□□□□ 0.39
RAB43-205ENST00000393308 CFAP43Q8NDM7 1665 aa17.45■□□□□ 0.38
RAB43-205ENST00000393308 PCF11O94913 1555 aaKnown RBP17.44■□□□□ 0.38
RAB43-205ENST00000393308 FMN1Q68DA7 1419 aa17.44■□□□□ 0.38
RAB43-205ENST00000393308 CFDP1Q9UEE9 299 aaPredicted RBP17.43■□□□□ 0.38
RAB43-205ENST00000393308 PPP1R15AO75807 674 aaPredicted RBP17.43■□□□□ 0.38
RAB43-205ENST00000393308 TSPY4P0CV99 314 aa17.4■□□□□ 0.38
RAB43-205ENST00000393308 TSPY10P0CW01 314 aa17.4■□□□□ 0.38
RAB43-205ENST00000393308 CUL7Q14999 1698 aa17.4■□□□□ 0.38
RAB43-205ENST00000393308 TIMELESSQ9UNS1 1208 aa17.39■□□□□ 0.37
RAB43-205ENST00000393308 ADAMTS12P58397 1594 aa17.37■□□□□ 0.37
RAB43-205ENST00000393308 BCANQ96GW7 911 aa17.36■□□□□ 0.37
RAB43-205ENST00000393308 PLEKHG5O94827 1062 aa17.36■□□□□ 0.37
RAB43-205ENST00000393308 EFCAB2Q5VUJ9 269 aa17.36■□□□□ 0.37
RAB43-205ENST00000393308 HIRIP3Q9BW71 556 aaPredicted RBP17.36■□□□□ 0.37
RAB43-205ENST00000393308 IQGAP2Q13576 1575 aa17.36■□□□□ 0.37
RAB43-205ENST00000393308 FKBP8Q14318 412 aa17.35■□□□□ 0.37
RAB43-205ENST00000393308 NUP160Q12769 1436 aa17.34■□□□□ 0.37
RAB43-205ENST00000393308 ABCA5Q8WWZ7 1642 aa17.34■□□□□ 0.37
RAB43-205ENST00000393308 FYCO1Q9BQS8 1478 aa17.33■□□□□ 0.37
RAB43-205ENST00000393308 UACAQ9BZF9 1416 aa17.33■□□□□ 0.37
RAB43-205ENST00000393308 MLECQ14165 292 aa17.33■□□□□ 0.36
RAB43-205ENST00000393308 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.33■□□□□ 0.363e-9■■■□□ 17
RAB43-205ENST00000393308 PBRM1Q86U86 1689 aa17.32■□□□□ 0.36
RAB43-205ENST00000393308 CASKIN1Q8WXD9 1431 aa17.31■□□□□ 0.36
RAB43-205ENST00000393308 CHIC2Q9UKJ5 165 aa17.31■□□□□ 0.36
RAB43-205ENST00000393308 CCER2I3L3R5 266 aa17.3■□□□□ 0.36
RAB43-205ENST00000393308 ARHGEF11O15085 1522 aa17.3■□□□□ 0.36
RAB43-205ENST00000393308 PODXL2Q9NZ53 605 aa17.29■□□□□ 0.36
RAB43-205ENST00000393308 EFCAB5A4FU69 1503 aa17.29■□□□□ 0.36
RAB43-205ENST00000393308 TRIM52Q96A61 297 aa17.29■□□□□ 0.36
RAB43-205ENST00000393308 ANP32EQ9BTT0 268 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms