RNA–Protein interactions for RNA: ENST00000392900.3

TCAF1-202, Transcript of TRPM8 channel associated factor 1, humanhuman

TSL 2

Gene TCAF1, Length 2,513 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1-202ENST00000392900 ERICH3Q5RHP9 1530 aa19.26■□□□□ 0.67
TCAF1-202ENST00000392900 EIF4G3O43432 1585 aaKnown RBP19.24■□□□□ 0.67
TCAF1-202ENST00000392900 PBRM1Q86U86 1689 aa19.2■□□□□ 0.66
TCAF1-202ENST00000392900 ARAP1Q96P48 1450 aa19.18■□□□□ 0.66
TCAF1-202ENST00000392900 CARMIL1Q5VZK9 1371 aa19.17■□□□□ 0.66
TCAF1-202ENST00000392900 GRIN2BQ13224 1484 aa19.14■□□□□ 0.65
TCAF1-202ENST00000392900 SNAPC4Q5SXM2 1469 aa19.11■□□□□ 0.65
TCAF1-202ENST00000392900 KANK4Q5T7N3 995 aaPredicted RBP19.09■□□□□ 0.65
TCAF1-202ENST00000392900 CUL7Q14999 1698 aa19.08■□□□□ 0.65
TCAF1-202ENST00000392900 ADAMTS12P58397 1594 aa19.07■□□□□ 0.64
TCAF1-202ENST00000392900 ARHGAP35Q9NRY4 1499 aa19.05■□□□□ 0.64
TCAF1-202ENST00000392900 DIEXFQ68CQ4 756 aaKnown RBP19.03■□□□□ 0.64
TCAF1-202ENST00000392900 FHAD1B1AJZ9 1412 aa19.03■□□□□ 0.64
TCAF1-202ENST00000392900 MAGI1Q96QZ7 1491 aaPredicted RBP18.99■□□□□ 0.63
TCAF1-202ENST00000392900 FBLN2P98095 1184 aa18.99■□□□□ 0.63
TCAF1-202ENST00000392900 SCAF1Q9H7N4 1312 aaKnown RBP18.96■□□□□ 0.63
TCAF1-202ENST00000392900 SYNJ2O15056 1496 aa18.95■□□□□ 0.62
TCAF1-202ENST00000392900 GRIN2AQ12879 1464 aa18.94■□□□□ 0.62
TCAF1-202ENST00000392900 CHMP7Q8WUX9 453 aaPredicted RBP18.94■□□□□ 0.62
TCAF1-202ENST00000392900 ZNF316A6NFI3 1004 aaPredicted RBP18.92■□□□□ 0.62
TCAF1-202ENST00000392900 CHD1O14646 1710 aa18.9■□□□□ 0.62
TCAF1-202ENST00000392900 CEP170Q5SW79 1584 aa18.89■□□□□ 0.61
TCAF1-202ENST00000392900 P3H3Q8IVL6 736 aa18.88■□□□□ 0.61
TCAF1-202ENST00000392900 CTTNBP2Q8WZ74 1663 aa18.88■□□□□ 0.61
TCAF1-202ENST00000392900 RRBP1Q9P2E9 1410 aaKnown RBP18.86■□□□□ 0.61
TCAF1-202ENST00000392900 ITGAEP38570 1179 aa18.85■□□□□ 0.61
TCAF1-202ENST00000392900 CCNB3Q8WWL7 1395 aa18.82■□□□□ 0.6
TCAF1-202ENST00000392900 DHX57Q6P158 1386 aaKnown RBP18.82■□□□□ 0.6
TCAF1-202ENST00000392900 NUP160Q12769 1436 aa18.81■□□□□ 0.6
TCAF1-202ENST00000392900 TIAM1Q13009 1591 aa18.8■□□□□ 0.6
TCAF1-202ENST00000392900 ATP1B4Q9UN42 357 aaPredicted RBP18.79■□□□□ 0.6
TCAF1-202ENST00000392900 IQGAP2Q13576 1575 aa18.77■□□□□ 0.6
TCAF1-202ENST00000392900 NEUROD1Q13562 356 aa18.77■□□□□ 0.6
TCAF1-202ENST00000392900 KIAA0586Q9BVV6 1533 aa18.77■□□□□ 0.59
TCAF1-202ENST00000392900 FHOD3Q2V2M9 1422 aa18.76■□□□□ 0.59
TCAF1-202ENST00000392900 PCF11O94913 1555 aaKnown RBP18.74■□□□□ 0.59
TCAF1-202ENST00000392900 ACIN1Q9UKV3 1341 aaKnown RBP18.74■□□□□ 0.59
TCAF1-202ENST00000392900 LRRC9Q6ZRR7 1453 aa18.73■□□□□ 0.59
TCAF1-202ENST00000392900 PHLDB1Q86UU1 1377 aa18.7■□□□□ 0.58
TCAF1-202ENST00000392900 MAP3K1Q13233 1512 aa18.7■□□□□ 0.58
TCAF1-202ENST00000392900 SAMD9Q5K651 1589 aa18.69■□□□□ 0.58
TCAF1-202ENST00000392900 CLSPNQ9HAW4 1339 aa18.68■□□□□ 0.58
TCAF1-202ENST00000392900 JPH4Q96JJ6 628 aa18.68■□□□□ 0.58
TCAF1-202ENST00000392900 DISP1Q96F81 1524 aa18.67■□□□□ 0.58
TCAF1-202ENST00000392900 UGGT2Q9NYU1 1516 aa18.67■□□□□ 0.58
TCAF1-202ENST00000392900 MIER1Q8N108 512 aa18.66■□□□□ 0.58
TCAF1-202ENST00000392900 FAM50AQ14320 339 aaKnown RBP18.66■□□□□ 0.58
TCAF1-202ENST00000392900 CFAP43Q8NDM7 1665 aa18.66■□□□□ 0.58
TCAF1-202ENST00000392900 CLASP1Q7Z460 1538 aa18.65■□□□□ 0.58
TCAF1-202ENST00000392900 YTHDC1Q96MU7 727 aaKnown RBP18.65■□□□□ 0.58
TCAF1-202ENST00000392900 RAB3GAP2Q9H2M9 1393 aa18.64■□□□□ 0.57
TCAF1-202ENST00000392900 CENPBP07199 599 aaPredicted RBP18.63■□□□□ 0.57
TCAF1-202ENST00000392900 EFCAB5A4FU69 1503 aa18.63■□□□□ 0.57
TCAF1-202ENST00000392900 ERCC6L2Q5T890 1561 aa18.63■□□□□ 0.57
TCAF1-202ENST00000392900 KIAA0556O60303 1618 aa18.61■□□□□ 0.57
TCAF1-202ENST00000392900 FYCO1Q9BQS8 1478 aa18.6■□□□□ 0.57
TCAF1-202ENST00000392900 SHROOM2Q13796 1616 aa18.59■□□□□ 0.57
TCAF1-202ENST00000392900 PRG4Q92954 1404 aaPredicted RBP18.59■□□□□ 0.57
TCAF1-202ENST00000392900 CASKIN1Q8WXD9 1431 aa18.58■□□□□ 0.57
TCAF1-202ENST00000392900 OSCARQ8IYS5 282 aa18.58■□□□□ 0.56
TCAF1-202ENST00000392900 GTF3C3Q9Y5Q9 886 aa18.55■□□□□ 0.56
TCAF1-202ENST00000392900 SETD5Q9C0A6 1442 aa18.55■□□□□ 0.56
TCAF1-202ENST00000392900 MAPKBP1O60336 1514 aa18.53■□□□□ 0.56
TCAF1-202ENST00000392900 FMN1Q68DA7 1419 aa18.53■□□□□ 0.56
TCAF1-202ENST00000392900 CARMIL2Q6F5E8 1435 aa18.48■□□□□ 0.55
TCAF1-202ENST00000392900 LRRIQ1Q96JM4 1722 aa18.48■□□□□ 0.55
TCAF1-202ENST00000392900 MTUS2Q5JR59 1369 aa18.47■□□□□ 0.55
TCAF1-202ENST00000392900 ARID3CA6NKF2 412 aa18.47■□□□□ 0.55
TCAF1-202ENST00000392900 PLB1Q6P1J6 1458 aa18.46■□□□□ 0.55
TCAF1-202ENST00000392900 SIN3AQ96ST3 1273 aa18.46■□□□□ 0.55
TCAF1-202ENST00000392900 FGD6Q6ZV73 1430 aa18.43■□□□□ 0.54
TCAF1-202ENST00000392900 PTPRGP23470 1445 aa18.41■□□□□ 0.54
TCAF1-202ENST00000392900 NUP153P49790 1475 aaKnown RBP18.38■□□□□ 0.53
TCAF1-202ENST00000392900 RAPGEF6Q8TEU7 1601 aa18.38■□□□□ 0.53
TCAF1-202ENST00000392900 CDK13Q14004 1512 aaKnown RBP18.37■□□□□ 0.53
TCAF1-202ENST00000392900 NCOA2Q15596 1464 aa18.37■□□□□ 0.53
TCAF1-202ENST00000392900 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.36■□□□□ 0.53
TCAF1-202ENST00000392900 ABCA8O94911 1581 aa18.36■□□□□ 0.53
TCAF1-202ENST00000392900 PTPRKQ15262 1439 aa18.36■□□□□ 0.53
TCAF1-202ENST00000392900 EPRSP07814 1512 aaKnown RBP18.33■□□□□ 0.53
TCAF1-202ENST00000392900 MAGI3Q5TCQ9 1506 aa18.33■□□□□ 0.53
TCAF1-202ENST00000392900 PRKCSHP14314 528 aaPredicted RBP18.33■□□□□ 0.53
TCAF1-202ENST00000392900 HECW1Q76N89 1606 aa18.32■□□□□ 0.52
TCAF1-202ENST00000392900 ARHGEF11O15085 1522 aa18.32■□□□□ 0.52
TCAF1-202ENST00000392900 SUPT6HQ7KZ85 1726 aaKnown RBP18.32■□□□□ 0.52
TCAF1-202ENST00000392900 MYOM3Q5VTT5 1437 aa18.32■□□□□ 0.52
TCAF1-202ENST00000392900 EHBP1L1Q8N3D4 1523 aa18.31■□□□□ 0.52
TCAF1-202ENST00000392900 BCL11AQ9H165 835 aa18.3■□□□□ 0.52
TCAF1-202ENST00000392900 CCDC18Q5T9S5 1454 aa18.29■□□□□ 0.52
TCAF1-202ENST00000392900 UACAQ9BZF9 1416 aa18.29■□□□□ 0.52
TCAF1-202ENST00000392900 RIMBP3CA6NJZ7 1639 aa18.27■□□□□ 0.52
TCAF1-202ENST00000392900 RIMBP3BA6NNM3 1639 aa18.27■□□□□ 0.52
TCAF1-202ENST00000392900 RIMBP3Q9UFD9 1639 aa18.27■□□□□ 0.52
TCAF1-202ENST00000392900 ATP10BO94823 1461 aa18.27■□□□□ 0.51
TCAF1-202ENST00000392900 PTPN23Q9H3S7 1636 aa18.26■□□□□ 0.51
TCAF1-202ENST00000392900 HFM1A2PYH4 1435 aa18.26■□□□□ 0.51
TCAF1-202ENST00000392900 ADCY10Q96PN6 1610 aa18.24■□□□□ 0.51
TCAF1-202ENST00000392900 HIRIP3Q9BW71 556 aaPredicted RBP18.24■□□□□ 0.51
TCAF1-202ENST00000392900 CHIC2Q9UKJ5 165 aa18.24■□□□□ 0.51
TCAF1-202ENST00000392900 ABCC2Q92887 1545 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms