RNA–Protein interactions for RNA: ENST00000392842.5

RFX4-203, Transcript of regulatory factor X4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX4, Length 3,955 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-203ENST00000392842 PLPPR3Q6T4P5 718 aa9.18□□□□□ -0.94
RFX4-203ENST00000392842 ZNF316A6NFI3 1004 aaPredicted RBP9.17□□□□□ -0.94
RFX4-203ENST00000392842 NEUROD1Q13562 356 aa9.17□□□□□ -0.94
RFX4-203ENST00000392842 POLR3GLQ9BT43 218 aa9.16□□□□□ -0.94
RFX4-203ENST00000392842 RAPGEF2Q9Y4G8 1499 aa9.16□□□□□ -0.94
RFX4-203ENST00000392842 ERICH6Q7L0X2 663 aa9.14□□□□□ -0.95
RFX4-203ENST00000392842 CLIP1P30622 1438 aa9.13□□□□□ -0.95
RFX4-203ENST00000392842 KIF21AQ7Z4S6 1674 aa9.13□□□□□ -0.95
RFX4-203ENST00000392842 ACIN1Q9UKV3 1341 aaKnown RBP9.12□□□□□ -0.95
RFX4-203ENST00000392842 SNAPC4Q5SXM2 1469 aa9.12□□□□□ -0.95
RFX4-203ENST00000392842 IFT140Q96RY7 1462 aa9.12□□□□□ -0.95
RFX4-203ENST00000392842 GOLGA3Q08378 1498 aa9.11□□□□□ -0.95
RFX4-203ENST00000392842 DNMBPQ6XZF7 1577 aa9.11□□□□□ -0.95
RFX4-203ENST00000392842 CEP162Q5TB80 1403 aa9.09□□□□□ -0.95
RFX4-203ENST00000392842 EEA1Q15075 1411 aa9.09□□□□□ -0.95
RFX4-203ENST00000392842 GRIN2BQ13224 1484 aa9.09□□□□□ -0.95
RFX4-203ENST00000392842 CHIC2Q9UKJ5 165 aa9.08□□□□□ -0.96
RFX4-203ENST00000392842 FHOD3Q2V2M9 1422 aa9.08□□□□□ -0.96
RFX4-203ENST00000392842 PLEKHD1A6NEE1 506 aa9.07□□□□□ -0.96
RFX4-203ENST00000392842 CDK11AQ9UQ88 783 aaPredicted RBP9.07□□□□□ -0.96
RFX4-203ENST00000392842 TOP2BQ02880 1626 aa9.06□□□□□ -0.96
RFX4-203ENST00000392842 TRIM52Q96A61 297 aa9.06□□□□□ -0.96
RFX4-203ENST00000392842 BCANQ96GW7 911 aa9.05□□□□□ -0.96
RFX4-203ENST00000392842 TNIKQ9UKE5 1360 aa9.04□□□□□ -0.96
RFX4-203ENST00000392842 FHAD1B1AJZ9 1412 aa9.03□□□□□ -0.96
RFX4-203ENST00000392842 MTUS2Q5JR59 1369 aa9.03□□□□□ -0.96
RFX4-203ENST00000392842 SCAF1Q9H7N4 1312 aaKnown RBP9.03□□□□□ -0.96
RFX4-203ENST00000392842 KANK4Q5T7N3 995 aaPredicted RBP9.03□□□□□ -0.96
RFX4-203ENST00000392842 PTPRGP23470 1445 aa9.02□□□□□ -0.97
RFX4-203ENST00000392842 SENP3Q9H4L4 574 aaPredicted RBP9.02□□□□□ -0.97
RFX4-203ENST00000392842 ABCA10Q8WWZ4 1543 aa9.02□□□□□ -0.97
RFX4-203ENST00000392842 CARMIL2Q6F5E8 1435 aa9.01□□□□□ -0.97
RFX4-203ENST00000392842 PRG4Q92954 1404 aaPredicted RBP9.01□□□□□ -0.97
RFX4-203ENST00000392842 MIER1Q8N108 512 aa8.98□□□□□ -0.97
RFX4-203ENST00000392842 MYT1Q01538 1121 aa8.97□□□□□ -0.97
RFX4-203ENST00000392842 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.97□□□□□ -0.97
RFX4-203ENST00000392842 WDR62O43379 1518 aa8.97□□□□□ -0.97
RFX4-203ENST00000392842 ANP32CO43423 234 aa8.97□□□□□ -0.97
RFX4-203ENST00000392842 FAM69CQ0P6D2 419 aa8.97□□□□□ -0.97
RFX4-203ENST00000392842 ZNF326Q5BKZ1 582 aaKnown RBP8.97□□□□□ -0.97
RFX4-203ENST00000392842 CFDP1Q9UEE9 299 aaPredicted RBP8.96□□□□□ -0.97
RFX4-203ENST00000392842 MLECQ14165 292 aa8.96□□□□□ -0.98
RFX4-203ENST00000392842 RRP7BPQ9NSQ0 103 aa8.95□□□□□ -0.98
RFX4-203ENST00000392842 DDX10Q13206 875 aaKnown RBP8.95□□□□□ -0.98
RFX4-203ENST00000392842 SYNJ2O15056 1496 aa8.94□□□□□ -0.98
RFX4-203ENST00000392842 ARID4BQ4LE39 1312 aaPredicted RBP8.94□□□□□ -0.98
RFX4-203ENST00000392842 GRIN2AQ12879 1464 aa8.94□□□□□ -0.98
RFX4-203ENST00000392842 PRXQ9BXM0 1461 aa8.93□□□□□ -0.98
RFX4-203ENST00000392842 HIRIP3Q9BW71 556 aaPredicted RBP8.93□□□□□ -0.98
RFX4-203ENST00000392842 EIF4G3O43432 1585 aaKnown RBP8.92□□□□□ -0.98
RFX4-203ENST00000392842 THOC2Q8NI27 1593 aaKnown RBP8.91□□□□□ -0.98
RFX4-203ENST00000392842 TSPY4P0CV99 314 aa8.9□□□□□ -0.98
RFX4-203ENST00000392842 TSPY10P0CW01 314 aa8.9□□□□□ -0.98
RFX4-203ENST00000392842 MAGI1Q96QZ7 1491 aaPredicted RBP8.9□□□□□ -0.99
RFX4-203ENST00000392842 HNRNPMP52272 730 aaKnown RBP eCLIP8.89□□□□□ -0.99
RFX4-203ENST00000392842 BIVM-ERCC5R4GMW8 1640 aa8.88□□□□□ -0.99
RFX4-203ENST00000392842 ZNF644Q9H582 1327 aaPredicted RBP8.87□□□□□ -0.99
RFX4-203ENST00000392842 ESF1Q9H501 851 aaKnown RBP8.87□□□□□ -0.99
RFX4-203ENST00000392842 PLB1Q6P1J6 1458 aa8.87□□□□□ -0.99
RFX4-203ENST00000392842 KIAA0586Q9BVV6 1533 aa8.87□□□□□ -0.99
RFX4-203ENST00000392842 CHGAP10645 457 aaKnown RBP8.86□□□□□ -0.99
RFX4-203ENST00000392842 ARAP1Q96P48 1450 aa8.86□□□□□ -0.99
RFX4-203ENST00000392842 CCNB3Q8WWL7 1395 aa8.86□□□□□ -0.99
RFX4-203ENST00000392842 FMN1Q68DA7 1419 aa8.86□□□□□ -0.99
RFX4-203ENST00000392842 ERICH3Q5RHP9 1530 aa8.86□□□□□ -0.99
RFX4-203ENST00000392842 VPS8Q8N3P4 1428 aa8.85□□□□□ -0.99
RFX4-203ENST00000392842 FKBP8Q14318 412 aa8.85□□□□□ -0.99
RFX4-203ENST00000392842 TARBP1Q13395 1621 aaKnown RBP8.85□□□□□ -0.99
RFX4-203ENST00000392842 ARHGAP35Q9NRY4 1499 aa8.85□□□□□ -0.99
RFX4-203ENST00000392842 TONSLQ96HA7 1378 aa8.85□□□□□ -0.99
RFX4-203ENST00000392842 DNAJC5Q9H3Z4 198 aa8.84□□□□□ -0.99
RFX4-203ENST00000392842 GGT6Q6P531 493 aa8.84□□□□□ -0.99
RFX4-203ENST00000392842 PRDM2Q13029 1718 aa8.83□□□□□ -1
RFX4-203ENST00000392842 SLC4A1APQ9BWU0 796 aaKnown RBP8.83□□□□□ -1
RFX4-203ENST00000392842 RAPGEF3O95398 923 aa8.82□□□□□ -1
RFX4-203ENST00000392842 EFCAB2Q5VUJ9 269 aa8.81□□□□□ -1
RFX4-203ENST00000392842 AFAP1Q8N556 730 aa8.81□□□□□ -1
RFX4-203ENST00000392842 HNRNPUQ00839 825 aaKnown RBP eCLIP8.81□□□□□ -1
RFX4-203ENST00000392842 IQGAP2Q13576 1575 aa8.79□□□□□ -1
RFX4-203ENST00000392842 KIF21BO75037 1637 aa8.79□□□□□ -1
RFX4-203ENST00000392842 DAXXQ9UER7 740 aaPredicted RBP8.79□□□□□ -1
RFX4-203ENST00000392842 FAM9BQ8IZU0 186 aa8.79□□□□□ -1
RFX4-203ENST00000392842 SIN3AQ96ST3 1273 aa8.79□□□□□ -1
RFX4-203ENST00000392842 UACAQ9BZF9 1416 aa8.78□□□□□ -1
RFX4-203ENST00000392842 CDK13Q14004 1512 aaKnown RBP8.78□□□□□ -1
RFX4-203ENST00000392842 ADAMTS12P58397 1594 aa8.78□□□□□ -1
RFX4-203ENST00000392842 STAG3Q9UJ98 1225 aa8.78□□□□□ -1
RFX4-203ENST00000392842 FOXD1Q16676 465 aa8.77□□□□□ -1.01
RFX4-203ENST00000392842 ABCA5Q8WWZ7 1642 aa8.76□□□□□ -1.01
RFX4-203ENST00000392842 CEP170Q5SW79 1584 aa8.75□□□□□ -1.01
RFX4-203ENST00000392842 NUP160Q12769 1436 aa8.75□□□□□ -1.01
RFX4-203ENST00000392842 ERCC6L2Q5T890 1561 aa8.75□□□□□ -1.01
RFX4-203ENST00000392842 KIF3BO15066 747 aa8.75□□□□□ -1.01
RFX4-203ENST00000392842 RGL3Q3MIN7 710 aa8.75□□□□□ -1.01
RFX4-203ENST00000392842 CUL7Q14999 1698 aa8.74□□□□□ -1.01
RFX4-203ENST00000392842 IRX6P78412 446 aaPredicted RBP8.74□□□□□ -1.01
RFX4-203ENST00000392842 KDM2AQ9Y2K7 1162 aa8.73□□□□□ -1.01
RFX4-203ENST00000392842 SALL2Q9Y467 1007 aaPredicted RBP8.73□□□□□ -1.01
RFX4-203ENST00000392842 CLSPNQ9HAW4 1339 aa8.73□□□□□ -1.01
RFX4-203ENST00000392842 SPAG9O60271 1321 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms