RNA–Protein interactions for RNA: ENST00000392062.6

RHBDD1-202, Transcript of rhomboid domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RHBDD1, Length 5,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-202ENST00000392062 ZNF316A6NFI3 1004 aaPredicted RBP13.19□□□□□ -0.3
RHBDD1-202ENST00000392062 RRP7BPQ9NSQ0 103 aa13.14□□□□□ -0.31
RHBDD1-202ENST00000392062 RAPGEF2Q9Y4G8 1499 aa13.13□□□□□ -0.31
RHBDD1-202ENST00000392062 ERICH6Q7L0X2 663 aa13.12□□□□□ -0.31
RHBDD1-202ENST00000392062 CCNB3Q8WWL7 1395 aa13.12□□□□□ -0.31
RHBDD1-202ENST00000392062 FMN1Q68DA7 1419 aa13.11□□□□□ -0.31
RHBDD1-202ENST00000392062 PLPPR3Q6T4P5 718 aa13.09□□□□□ -0.31
RHBDD1-202ENST00000392062 VPS8Q8N3P4 1428 aa13.09□□□□□ -0.31
RHBDD1-202ENST00000392062 HMGXB3Q12766 1538 aa13.06□□□□□ -0.32
RHBDD1-202ENST00000392062 NEFMP07197 916 aa13.06□□□□□ -0.32
RHBDD1-202ENST00000392062 CC2D2AQ9P2K1 1620 aa13.04□□□□□ -0.32
RHBDD1-202ENST00000392062 JPH4Q96JJ6 628 aa13.03□□□□□ -0.32
RHBDD1-202ENST00000392062 FGD5Q6ZNL6 1462 aa13.03□□□□□ -0.32
RHBDD1-202ENST00000392062 ARID4BQ4LE39 1312 aaPredicted RBP13.02□□□□□ -0.33
RHBDD1-202ENST00000392062 CFTRP13569 1480 aa13.02□□□□□ -0.33
RHBDD1-202ENST00000392062 KDM2AQ9Y2K7 1162 aa13□□□□□ -0.33
RHBDD1-202ENST00000392062 GAPVD1Q14C86 1478 aa13□□□□□ -0.33
RHBDD1-202ENST00000392062 BICRAQ9NZM4 1560 aa12.99□□□□□ -0.33
RHBDD1-202ENST00000392062 ARHGAP35Q9NRY4 1499 aa12.98□□□□□ -0.33
RHBDD1-202ENST00000392062 TRHP20396 242 aaPredicted RBP12.97□□□□□ -0.33
RHBDD1-202ENST00000392062 PPP1R15AO75807 674 aaPredicted RBP12.97□□□□□ -0.33
RHBDD1-202ENST00000392062 EFCAB2Q5VUJ9 269 aa12.96□□□□□ -0.33
RHBDD1-202ENST00000392062 OSCARQ8IYS5 282 aa12.94□□□□□ -0.34
RHBDD1-202ENST00000392062 IGF1RP08069 1367 aa12.94□□□□□ -0.34
RHBDD1-202ENST00000392062 FHOD3Q2V2M9 1422 aa12.94□□□□□ -0.34
RHBDD1-202ENST00000392062 RAD54L2Q9Y4B4 1467 aa12.93□□□□□ -0.34
RHBDD1-202ENST00000392062 EIF4G2P78344 907 aaKnown RBP eCLIP12.92□□□□□ -0.34
RHBDD1-202ENST00000392062 KANK1Q14678 1352 aa12.92□□□□□ -0.34
RHBDD1-202ENST00000392062 CLSPNQ9HAW4 1339 aa12.91□□□□□ -0.34
RHBDD1-202ENST00000392062 RUSC2Q8N2Y8 1516 aa12.91□□□□□ -0.34
RHBDD1-202ENST00000392062 MRC2Q9UBG0 1479 aa12.91□□□□□ -0.34
RHBDD1-202ENST00000392062 RGL3Q3MIN7 710 aa12.91□□□□□ -0.34
RHBDD1-202ENST00000392062 KANK4Q5T7N3 995 aaPredicted RBP12.9□□□□□ -0.34
RHBDD1-202ENST00000392062 PTPRGP23470 1445 aa12.9□□□□□ -0.34
RHBDD1-202ENST00000392062 DAXXQ9UER7 740 aaPredicted RBP12.9□□□□□ -0.35
RHBDD1-202ENST00000392062 DDX10Q13206 875 aaKnown RBP12.89□□□□□ -0.35
RHBDD1-202ENST00000392062 CCDC18Q5T9S5 1454 aa12.89□□□□□ -0.35
RHBDD1-202ENST00000392062 NESP48681 1621 aa12.89□□□□□ -0.35
RHBDD1-202ENST00000392062 RSPH4AQ5TD94 716 aa12.88□□□□□ -0.35
RHBDD1-202ENST00000392062 GRIN2BQ13224 1484 aa12.87□□□□□ -0.35
RHBDD1-202ENST00000392062 AQRO60306 1485 aaKnown RBP eCLIP12.86□□□□□ -0.35
RHBDD1-202ENST00000392062 SLC24A1O60721 1099 aa12.86□□□□□ -0.35
RHBDD1-202ENST00000392062 IFT140Q96RY7 1462 aa12.85□□□□□ -0.35
RHBDD1-202ENST00000392062 CDCA8Q53HL2 280 aa12.85□□□□□ -0.35
RHBDD1-202ENST00000392062 ANKRD30AQ9BXX3 1397 aa12.83□□□□□ -0.35
RHBDD1-202ENST00000392062 SETD5Q9C0A6 1442 aa12.83□□□□□ -0.35
RHBDD1-202ENST00000392062 CANXP27824 592 aaKnown RBP12.83□□□□□ -0.36
RHBDD1-202ENST00000392062 TOPBP1Q92547 1522 aa12.82□□□□□ -0.36
RHBDD1-202ENST00000392062 TIMELESSQ9UNS1 1208 aa12.82□□□□□ -0.36
RHBDD1-202ENST00000392062 ZBTB47Q9UFB7 747 aaPredicted RBP12.82□□□□□ -0.36
RHBDD1-202ENST00000392062 HDGFP51858 240 aaKnown RBP12.81□□□□□ -0.36
RHBDD1-202ENST00000392062 TMC1Q8TDI8 760 aa12.81□□□□□ -0.36
RHBDD1-202ENST00000392062 LAMC3Q9Y6N6 1575 aa12.8□□□□□ -0.36
RHBDD1-202ENST00000392062 GGT6Q6P531 493 aa12.8□□□□□ -0.36
RHBDD1-202ENST00000392062 C14orf37Q86TY3 774 aa12.8□□□□□ -0.36
RHBDD1-202ENST00000392062 CARD11Q9BXL7 1154 aa12.8□□□□□ -0.36
RHBDD1-202ENST00000392062 MLECQ14165 292 aa12.79□□□□□ -0.36
RHBDD1-202ENST00000392062 CYB5RLQ6IPT4 315 aa12.78□□□□□ -0.36
RHBDD1-202ENST00000392062 SPAG9O60271 1321 aaKnown RBP12.77□□□□□ -0.36
RHBDD1-202ENST00000392062 POLA1P09884 1462 aaPredicted RBP12.77□□□□□ -0.36
RHBDD1-202ENST00000392062 PEG3Q9GZU2 1588 aa12.77□□□□□ -0.37
RHBDD1-202ENST00000392062 SYNJ1O43426 1573 aa12.77□□□□□ -0.37
RHBDD1-202ENST00000392062 DNMBPQ6XZF7 1577 aa12.77□□□□□ -0.37
RHBDD1-202ENST00000392062 TOP2BQ02880 1626 aa12.76□□□□□ -0.37
RHBDD1-202ENST00000392062 SIN3AQ96ST3 1273 aa12.76□□□□□ -0.37
RHBDD1-202ENST00000392062 DNAJC5BQ9UF47 199 aa12.76□□□□□ -0.37
RHBDD1-202ENST00000392062 WDR43Q15061 677 aaKnown RBP eCLIP12.76□□□□□ -0.37
RHBDD1-202ENST00000392062 PKD2Q13563 968 aa12.75□□□□□ -0.37
RHBDD1-202ENST00000392062 HNRNPMP52272 730 aaKnown RBP eCLIP12.75□□□□□ -0.37
RHBDD1-202ENST00000392062 SENP3Q9H4L4 574 aaPredicted RBP12.75□□□□□ -0.37
RHBDD1-202ENST00000392062 CUX1P39880 1505 aa12.74□□□□□ -0.37
RHBDD1-202ENST00000392062 FAM9BQ8IZU0 186 aa12.74□□□□□ -0.37
RHBDD1-202ENST00000392062 ERICH3Q5RHP9 1530 aa12.74□□□□□ -0.37
RHBDD1-202ENST00000392062 HIRIP3Q9BW71 556 aaPredicted RBP12.74□□□□□ -0.37
RHBDD1-202ENST00000392062 NUP155O75694 1391 aa12.74□□□□□ -0.37
RHBDD1-202ENST00000392062 POGKQ9P215 609 aa12.73□□□□□ -0.37
RHBDD1-202ENST00000392062 HNRNPUQ00839 825 aaKnown RBP eCLIP12.73□□□□□ -0.37
RHBDD1-202ENST00000392062 MRS2Q9HD23 443 aa12.73□□□□□ -0.37
RHBDD1-202ENST00000392062 UNC13AQ9UPW8 1703 aa12.73□□□□□ -0.37
RHBDD1-202ENST00000392062 DCAF11Q8TEB1 546 aa12.72□□□□□ -0.37
RHBDD1-202ENST00000392062 KIF3BO15066 747 aa12.72□□□□□ -0.37
RHBDD1-202ENST00000392062 RAB3GAP2Q9H2M9 1393 aa12.7□□□□□ -0.38
RHBDD1-202ENST00000392062 KIF21BO75037 1637 aa12.7□□□□□ -0.38
RHBDD1-202ENST00000392062 MPHOSPH9Q99550 1183 aa12.7□□□□□ -0.38
RHBDD1-202ENST00000392062 KNSTRNQ9Y448 316 aa12.69□□□□□ -0.38
RHBDD1-202ENST00000392062 SCAF1Q9H7N4 1312 aaKnown RBP12.69□□□□□ -0.38
RHBDD1-202ENST00000392062 PRXQ9BXM0 1461 aa12.67□□□□□ -0.38
RHBDD1-202ENST00000392062 CFAP53Q96M91 514 aa12.66□□□□□ -0.38
RHBDD1-202ENST00000392062 SNAPC4Q5SXM2 1469 aa12.65□□□□□ -0.38
RHBDD1-202ENST00000392062 PRG4Q92954 1404 aaPredicted RBP12.65□□□□□ -0.38
RHBDD1-202ENST00000392062 ABCA10Q8WWZ4 1543 aa12.65□□□□□ -0.38
RHBDD1-202ENST00000392062 WASHC2CQ9Y4E1 1318 aa12.65□□□□□ -0.38
RHBDD1-202ENST00000392062 TMF1P82094 1093 aa12.65□□□□□ -0.38
RHBDD1-202ENST00000392062 CASKIN1Q8WXD9 1431 aa12.64□□□□□ -0.39
RHBDD1-202ENST00000392062 GTF3C3Q9Y5Q9 886 aa12.64□□□□□ -0.39
RHBDD1-202ENST00000392062 EFCAB5A4FU69 1503 aa12.63□□□□□ -0.39
RHBDD1-202ENST00000392062 SALL2Q9Y467 1007 aaPredicted RBP12.62□□□□□ -0.39
RHBDD1-202ENST00000392062 MYOM3Q5VTT5 1437 aa12.62□□□□□ -0.39
RHBDD1-202ENST00000392062 SYNJ2O15056 1496 aa12.62□□□□□ -0.39
RHBDD1-202ENST00000392062 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms