RNA–Protein interactions for RNA: ENST00000392001.6

RAB17-202, Transcript of RAB17, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB17, Length 1,792 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB17-202ENST00000392001 CTTNBP2Q8WZ74 1663 aa24.68■■□□□ 1.54
RAB17-202ENST00000392001 CHMP7Q8WUX9 453 aaPredicted RBP24.67■■□□□ 1.54
RAB17-202ENST00000392001 RANGAP1P46060 587 aaPredicted RBP24.61■■□□□ 1.53
RAB17-202ENST00000392001 FBLN2P98095 1184 aa24.59■■□□□ 1.53
RAB17-202ENST00000392001 ARHGAP35Q9NRY4 1499 aa24.57■■□□□ 1.52
RAB17-202ENST00000392001 KIAA0586Q9BVV6 1533 aa24.55■■□□□ 1.52
RAB17-202ENST00000392001 NUP160Q12769 1436 aa24.54■■□□□ 1.52
RAB17-202ENST00000392001 IQGAP2Q13576 1575 aa24.53■■□□□ 1.52
RAB17-202ENST00000392001 CEP170Q5SW79 1584 aa24.53■■□□□ 1.52
RAB17-202ENST00000392001 ARAP1Q96P48 1450 aa24.51■■□□□ 1.51
RAB17-202ENST00000392001 EFCAB5A4FU69 1503 aa24.5■■□□□ 1.51
RAB17-202ENST00000392001 CHD1O14646 1710 aa24.49■■□□□ 1.51
RAB17-202ENST00000392001 VPS8Q8N3P4 1428 aa24.47■■□□□ 1.51
RAB17-202ENST00000392001 SAMD9Q5K651 1589 aa24.45■■□□□ 1.5
RAB17-202ENST00000392001 UGGT2Q9NYU1 1516 aa24.44■■□□□ 1.5
RAB17-202ENST00000392001 P3H3Q8IVL6 736 aa24.37■■□□□ 1.49
RAB17-202ENST00000392001 FHOD3Q2V2M9 1422 aa24.36■■□□□ 1.49
RAB17-202ENST00000392001 JPH4Q96JJ6 628 aa24.34■■□□□ 1.49
RAB17-202ENST00000392001 DISP1Q96F81 1524 aa24.32■■□□□ 1.48
RAB17-202ENST00000392001 FMN1Q68DA7 1419 aa24.28■■□□□ 1.48
RAB17-202ENST00000392001 KIAA0556O60303 1618 aa24.28■■□□□ 1.48
RAB17-202ENST00000392001 CLASP1Q7Z460 1538 aa24.26■■□□□ 1.47
RAB17-202ENST00000392001 SHROOM2Q13796 1616 aa24.24■■□□□ 1.47
RAB17-202ENST00000392001 CARMIL2Q6F5E8 1435 aa24.23■■□□□ 1.47
RAB17-202ENST00000392001 CASKIN1Q8WXD9 1431 aa24.2■■□□□ 1.47
RAB17-202ENST00000392001 RIMBP3CA6NJZ7 1639 aa24.2■■□□□ 1.46
RAB17-202ENST00000392001 RIMBP3BA6NNM3 1639 aa24.2■■□□□ 1.46
RAB17-202ENST00000392001 RIMBP3Q9UFD9 1639 aa24.2■■□□□ 1.46
RAB17-202ENST00000392001 PRG4Q92954 1404 aaPredicted RBP24.18■■□□□ 1.46
RAB17-202ENST00000392001 ARHGEF11O15085 1522 aa24.18■■□□□ 1.46
RAB17-202ENST00000392001 PCF11O94913 1555 aaKnown RBP24.18■■□□□ 1.46
RAB17-202ENST00000392001 APLP2Q06481 763 aa24.18■■□□□ 1.46
RAB17-202ENST00000392001 FYCO1Q9BQS8 1478 aa24.18■■□□□ 1.46
RAB17-202ENST00000392001 MAP3K1Q13233 1512 aa24.14■■□□□ 1.45
RAB17-202ENST00000392001 PPARGC1BQ86YN6 1023 aaKnown RBP24.14■■□□□ 1.45
RAB17-202ENST00000392001 TIAM1Q13009 1591 aa24.06■■□□□ 1.44
RAB17-202ENST00000392001 CYB5RLQ6IPT4 315 aa24.06■■□□□ 1.44
RAB17-202ENST00000392001 ATP1B4Q9UN42 357 aaPredicted RBP24.06■■□□□ 1.44
RAB17-202ENST00000392001 ERCC6L2Q5T890 1561 aa24.04■■□□□ 1.44
RAB17-202ENST00000392001 KANK4Q5T7N3 995 aaPredicted RBP24.03■■□□□ 1.44
RAB17-202ENST00000392001 HECW1Q76N89 1606 aa24.02■■□□□ 1.44
RAB17-202ENST00000392001 CFAP43Q8NDM7 1665 aa24.02■■□□□ 1.44
RAB17-202ENST00000392001 TTBK1Q5TCY1 1321 aaPredicted RBP24.02■■□□□ 1.44
RAB17-202ENST00000392001 PTPRGP23470 1445 aa24.02■■□□□ 1.44
RAB17-202ENST00000392001 TRIM26Q12899 539 aaPredicted RBP24.01■■□□□ 1.43
RAB17-202ENST00000392001 RAPGEF6Q8TEU7 1601 aa24.01■■□□□ 1.43
RAB17-202ENST00000392001 LRRIQ1Q96JM4 1722 aa24.01■■□□□ 1.43
RAB17-202ENST00000392001 PLB1Q6P1J6 1458 aa23.99■■□□□ 1.43
RAB17-202ENST00000392001 CCDC18Q5T9S5 1454 aa23.97■■□□□ 1.43
RAB17-202ENST00000392001 LRRC9Q6ZRR7 1453 aa23.97■■□□□ 1.43
RAB17-202ENST00000392001 ABCA8O94911 1581 aa23.97■■□□□ 1.43
RAB17-202ENST00000392001 EPRSP07814 1512 aaKnown RBP23.96■■□□□ 1.43
RAB17-202ENST00000392001 NUP153P49790 1475 aaKnown RBP23.96■■□□□ 1.43
RAB17-202ENST00000392001 UACAQ9BZF9 1416 aa23.88■■□□□ 1.41
RAB17-202ENST00000392001 CDK13Q14004 1512 aaKnown RBP23.88■■□□□ 1.41
RAB17-202ENST00000392001 PCGF6Q9BYE7 350 aa23.88■■□□□ 1.41
RAB17-202ENST00000392001 MTUS2Q5JR59 1369 aa23.84■■□□□ 1.41
RAB17-202ENST00000392001 ARID3CA6NKF2 412 aa23.83■■□□□ 1.4
RAB17-202ENST00000392001 MAGI3Q5TCQ9 1506 aa23.82■■□□□ 1.4
RAB17-202ENST00000392001 ATP10BO94823 1461 aa23.81■■□□□ 1.4
RAB17-202ENST00000392001 EHBP1L1Q8N3D4 1523 aa23.81■■□□□ 1.4
RAB17-202ENST00000392001 ABCC2Q92887 1545 aa23.81■■□□□ 1.4
RAB17-202ENST00000392001 UHRF1BP1LA0JNW5 1464 aa23.8■■□□□ 1.4
RAB17-202ENST00000392001 CDK11AQ9UQ88 783 aaPredicted RBP23.78■■□□□ 1.4
RAB17-202ENST00000392001 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.75■■□□□ 1.39
RAB17-202ENST00000392001 HNRNPUL2Q1KMD3 747 aaKnown RBP23.75■■□□□ 1.39
RAB17-202ENST00000392001 SUPT6HQ7KZ85 1726 aaKnown RBP23.73■■□□□ 1.39
RAB17-202ENST00000392001 PHLDB1Q86UU1 1377 aa23.73■■□□□ 1.39
RAB17-202ENST00000392001 NCOA2Q15596 1464 aa23.71■■□□□ 1.39
RAB17-202ENST00000392001 RRBP1Q9P2E9 1410 aaKnown RBP23.71■■□□□ 1.39
RAB17-202ENST00000392001 TROQ12816 1431 aaPredicted RBP23.7■■□□□ 1.38
RAB17-202ENST00000392001 KDM5BQ9UGL1 1544 aa23.7■■□□□ 1.38
RAB17-202ENST00000392001 PLEKHD1A6NEE1 506 aa23.68■■□□□ 1.38
RAB17-202ENST00000392001 ADCY10Q96PN6 1610 aa23.68■■□□□ 1.38
RAB17-202ENST00000392001 TRHP20396 242 aaPredicted RBP23.65■■□□□ 1.38
RAB17-202ENST00000392001 CCNB3Q8WWL7 1395 aa23.63■■□□□ 1.37
RAB17-202ENST00000392001 ZCCHC11Q5TAX3 1644 aaKnown RBP23.63■■□□□ 1.37
RAB17-202ENST00000392001 MYOM3Q5VTT5 1437 aa23.61■■□□□ 1.37
RAB17-202ENST00000392001 FGD6Q6ZV73 1430 aa23.58■■□□□ 1.37
RAB17-202ENST00000392001 KIF14Q15058 1648 aa23.56■■□□□ 1.36
RAB17-202ENST00000392001 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.56■■□□□ 1.362e-7■■■□□ 16.9
RAB17-202ENST00000392001 ABCC10Q5T3U5 1492 aa23.53■■□□□ 1.36
RAB17-202ENST00000392001 NPM1P06748 294 aaKnown RBP eCLIP23.52■■□□□ 1.36
RAB17-202ENST00000392001 MIA2Q96PC5 1412 aa23.52■■□□□ 1.36
RAB17-202ENST00000392001 GPATCH8Q9UKJ3 1502 aaKnown RBP23.49■■□□□ 1.35
RAB17-202ENST00000392001 FAM50AQ14320 339 aaKnown RBP23.47■■□□□ 1.35
RAB17-202ENST00000392001 TCOF1Q13428 1488 aaKnown RBP23.46■■□□□ 1.35
RAB17-202ENST00000392001 PTPN23Q9H3S7 1636 aa23.46■■□□□ 1.35
RAB17-202ENST00000392001 WDR7Q9Y4E6 1490 aa23.45■■□□□ 1.34
RAB17-202ENST00000392001 ITSN2Q9NZM3 1697 aa23.45■■□□□ 1.34
RAB17-202ENST00000392001 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.43■■□□□ 1.34
RAB17-202ENST00000392001 ASXL2Q76L83 1435 aa23.43■■□□□ 1.34
RAB17-202ENST00000392001 KCNH8Q96L42 1107 aa23.42■■□□□ 1.34
RAB17-202ENST00000392001 CDC42BPAQ5VT25 1732 aa23.42■■□□□ 1.34
RAB17-202ENST00000392001 CFDP1Q9UEE9 299 aaPredicted RBP23.41■■□□□ 1.34
RAB17-202ENST00000392001 TTC37Q6PGP7 1564 aa23.39■■□□□ 1.33
RAB17-202ENST00000392001 ITGAEP38570 1179 aa23.36■■□□□ 1.33
RAB17-202ENST00000392001 PREX2Q70Z35 1606 aa23.35■■□□□ 1.33
RAB17-202ENST00000392001 ZNF644Q9H582 1327 aaPredicted RBP23.34■■□□□ 1.33
RAB17-202ENST00000392001 CDC42BPBQ9Y5S2 1711 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms