RNA–Protein interactions for RNA: ENST00000390442.3

TRAV12-3-201, Transcript of T cell receptor alpha variable 12-3, humanhuman

APPRIS P1 BASIC

Gene TRAV12-3, Length 399 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3-201ENST00000390442 FOXD4L1Q9NU39 408 aa12.38□□□□□ -0.43
TRAV12-3-201ENST00000390442 TDRD9Q8NDG6 1382 aaKnown RBP12.38□□□□□ -0.43
TRAV12-3-201ENST00000390442 CLASP1Q7Z460 1538 aa12.37□□□□□ -0.43
TRAV12-3-201ENST00000390442 TOP2BQ02880 1626 aa12.37□□□□□ -0.43
TRAV12-3-201ENST00000390442 WRNQ14191 1432 aaPredicted RBP eCLIP12.37□□□□□ -0.43
TRAV12-3-201ENST00000390442 CHMP7Q8WUX9 453 aaPredicted RBP12.35□□□□□ -0.43
TRAV12-3-201ENST00000390442 MAGI1Q96QZ7 1491 aaPredicted RBP12.34□□□□□ -0.43
TRAV12-3-201ENST00000390442 ABCA10Q8WWZ4 1543 aa12.32□□□□□ -0.44
TRAV12-3-201ENST00000390442 GRIN2BQ13224 1484 aa12.3□□□□□ -0.44
TRAV12-3-201ENST00000390442 ABCA5Q8WWZ7 1642 aa12.29□□□□□ -0.44
TRAV12-3-201ENST00000390442 SYNJ2O15056 1496 aa12.29□□□□□ -0.44
TRAV12-3-201ENST00000390442 RNF216Q9NWF9 866 aaPredicted RBP12.28□□□□□ -0.44
TRAV12-3-201ENST00000390442 PBRM1Q86U86 1689 aa12.28□□□□□ -0.44
TRAV12-3-201ENST00000390442 GAPVD1Q14C86 1478 aa12.27□□□□□ -0.45
TRAV12-3-201ENST00000390442 ERCC6L2Q5T890 1561 aa12.16□□□□□ -0.46
TRAV12-3-201ENST00000390442 ERICH3Q5RHP9 1530 aa12.16□□□□□ -0.46
TRAV12-3-201ENST00000390442 ADAMTS12P58397 1594 aa12.15□□□□□ -0.46
TRAV12-3-201ENST00000390442 GRIN2AQ12879 1464 aa12.14□□□□□ -0.47
TRAV12-3-201ENST00000390442 CEP170Q5SW79 1584 aa12.13□□□□□ -0.47
TRAV12-3-201ENST00000390442 DMRT2Q9Y5R5 561 aa12.12□□□□□ -0.47
TRAV12-3-201ENST00000390442 IGF1RP08069 1367 aa12.11□□□□□ -0.47
TRAV12-3-201ENST00000390442 FHAD1B1AJZ9 1412 aa12.1□□□□□ -0.47
TRAV12-3-201ENST00000390442 NUP160Q12769 1436 aa12.1□□□□□ -0.47
TRAV12-3-201ENST00000390442 KIF13AQ9H1H9 1805 aa12.09□□□□□ -0.47
TRAV12-3-201ENST00000390442 SHROOM2Q13796 1616 aa12.08□□□□□ -0.48
TRAV12-3-201ENST00000390442 HOXD11P31277 338 aaPredicted RBP12.08□□□□□ -0.48
TRAV12-3-201ENST00000390442 KIF27Q86VH2 1401 aa12.08□□□□□ -0.48
TRAV12-3-201ENST00000390442 RUSC2Q8N2Y8 1516 aa12.07□□□□□ -0.48
TRAV12-3-201ENST00000390442 SLC4A2P04920 1241 aa12.07□□□□□ -0.48
TRAV12-3-201ENST00000390442 PRG4Q92954 1404 aaPredicted RBP12.02□□□□□ -0.49
TRAV12-3-201ENST00000390442 CUL7Q14999 1698 aa12.01□□□□□ -0.49
TRAV12-3-201ENST00000390442 CARMIL1Q5VZK9 1371 aa11.98□□□□□ -0.49
TRAV12-3-201ENST00000390442 ABCC10Q5T3U5 1492 aa11.97□□□□□ -0.49
TRAV12-3-201ENST00000390442 FAM69CQ0P6D2 419 aa11.97□□□□□ -0.49
TRAV12-3-201ENST00000390442 JPH4Q96JJ6 628 aa11.97□□□□□ -0.49
TRAV12-3-201ENST00000390442 NPM1P06748 294 aaKnown RBP eCLIP11.96□□□□□ -0.49
TRAV12-3-201ENST00000390442 DIP2BQ9P265 1576 aa11.96□□□□□ -0.5
TRAV12-3-201ENST00000390442 MAPKBP1O60336 1514 aa11.96□□□□□ -0.5
TRAV12-3-201ENST00000390442 FKBP8Q14318 412 aa11.95□□□□□ -0.5
TRAV12-3-201ENST00000390442 KDM6BO15054 1643 aa11.94□□□□□ -0.5
TRAV12-3-201ENST00000390442 KIAA0586Q9BVV6 1533 aa11.93□□□□□ -0.5
TRAV12-3-201ENST00000390442 PRXQ9BXM0 1461 aa11.93□□□□□ -0.5
TRAV12-3-201ENST00000390442 ADCY10Q96PN6 1610 aa11.93□□□□□ -0.5
TRAV12-3-201ENST00000390442 ATXN8OSP0DMR3 200 aa11.92□□□□□ -0.5
TRAV12-3-201ENST00000390442 TSPOAP1O95153 1857 aa11.91□□□□□ -0.5
TRAV12-3-201ENST00000390442 RAPGEF2Q9Y4G8 1499 aa11.9□□□□□ -0.5
TRAV12-3-201ENST00000390442 KDM4FA0A1W2PPD8 638 aa11.87□□□□□ -0.51
TRAV12-3-201ENST00000390442 MYCNP04198 464 aaPredicted RBP11.84□□□□□ -0.51
TRAV12-3-201ENST00000390442 IQGAP2Q13576 1575 aa11.84□□□□□ -0.51
TRAV12-3-201ENST00000390442 EEA1Q15075 1411 aa11.83□□□□□ -0.52
TRAV12-3-201ENST00000390442 DISP1Q96F81 1524 aa11.82□□□□□ -0.52
TRAV12-3-201ENST00000390442 UGGT2Q9NYU1 1516 aa11.82□□□□□ -0.52
TRAV12-3-201ENST00000390442 TTBK1Q5TCY1 1321 aaPredicted RBP11.81□□□□□ -0.52
TRAV12-3-201ENST00000390442 CTTNBP2Q8WZ74 1663 aa11.81□□□□□ -0.52
TRAV12-3-201ENST00000390442 ILDR1Q86SU0 546 aaPredicted RBP11.8□□□□□ -0.52
TRAV12-3-201ENST00000390442 PTPRGP23470 1445 aa11.78□□□□□ -0.52
TRAV12-3-201ENST00000390442 ABCC2Q92887 1545 aa11.77□□□□□ -0.52
TRAV12-3-201ENST00000390442 PPRC1Q5VV67 1664 aaKnown RBP11.77□□□□□ -0.53
TRAV12-3-201ENST00000390442 ADGRL1O94910 1474 aa11.76□□□□□ -0.53
TRAV12-3-201ENST00000390442 KIF21BO75037 1637 aa11.76□□□□□ -0.53
TRAV12-3-201ENST00000390442 CARMIL2Q6F5E8 1435 aa11.76□□□□□ -0.53
TRAV12-3-201ENST00000390442 ASXL2Q76L83 1435 aa11.76□□□□□ -0.53
TRAV12-3-201ENST00000390442 KIAA0556O60303 1618 aa11.75□□□□□ -0.53
TRAV12-3-201ENST00000390442 TNIKQ9UKE5 1360 aa11.75□□□□□ -0.53
TRAV12-3-201ENST00000390442 PLB1Q6P1J6 1458 aa11.75□□□□□ -0.53
TRAV12-3-201ENST00000390442 GLI2P10070 1586 aa11.75□□□□□ -0.53
TRAV12-3-201ENST00000390442 DCAF8L1A6NGE4 600 aa11.74□□□□□ -0.53
TRAV12-3-201ENST00000390442 FAM9AQ8IZU1 332 aaPredicted RBP11.74□□□□□ -0.53
TRAV12-3-201ENST00000390442 UHRF1BP1LA0JNW5 1464 aa11.7□□□□□ -0.54
TRAV12-3-201ENST00000390442 SAMD9Q5K651 1589 aa11.7□□□□□ -0.54
TRAV12-3-201ENST00000390442 HECW2Q9P2P5 1572 aa11.7□□□□□ -0.54
TRAV12-3-201ENST00000390442 UACAQ9BZF9 1416 aa11.69□□□□□ -0.54
TRAV12-3-201ENST00000390442 MAP3K4Q9Y6R4 1608 aa11.69□□□□□ -0.54
TRAV12-3-201ENST00000390442 TEX14Q8IWB6 1497 aa11.69□□□□□ -0.54
TRAV12-3-201ENST00000390442 EPRSP07814 1512 aaKnown RBP11.68□□□□□ -0.54
TRAV12-3-201ENST00000390442 COL17A1Q9UMD9 1497 aaPredicted RBP11.67□□□□□ -0.54
TRAV12-3-201ENST00000390442 ZCCHC11Q5TAX3 1644 aaKnown RBP11.67□□□□□ -0.54
TRAV12-3-201ENST00000390442 GOLGA3Q08378 1498 aa11.66□□□□□ -0.54
TRAV12-3-201ENST00000390442 ABCA8O94911 1581 aa11.66□□□□□ -0.54
TRAV12-3-201ENST00000390442 KDM5BQ9UGL1 1544 aa11.65□□□□□ -0.54
TRAV12-3-201ENST00000390442 ATF5Q9Y2D1 282 aaPredicted RBP11.65□□□□□ -0.54
TRAV12-3-201ENST00000390442 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.61□□□□□ -0.55
TRAV12-3-201ENST00000390442 WDR7Q9Y4E6 1490 aa11.61□□□□□ -0.55
TRAV12-3-201ENST00000390442 P3H3Q8IVL6 736 aa11.59□□□□□ -0.55
TRAV12-3-201ENST00000390442 ARHGAP35Q9NRY4 1499 aa11.58□□□□□ -0.56
TRAV12-3-201ENST00000390442 EFCAB5A4FU69 1503 aa11.58□□□□□ -0.56
TRAV12-3-201ENST00000390442 FHOD3Q2V2M9 1422 aa11.58□□□□□ -0.56
TRAV12-3-201ENST00000390442 CFAP43Q8NDM7 1665 aa11.58□□□□□ -0.56
TRAV12-3-201ENST00000390442 PLCB2Q00722 1185 aa11.56□□□□□ -0.56
TRAV12-3-201ENST00000390442 CD109Q6YHK3 1445 aa11.56□□□□□ -0.56
TRAV12-3-201ENST00000390442 MAGI3Q5TCQ9 1506 aa11.55□□□□□ -0.56
TRAV12-3-201ENST00000390442 UBTFP17480 764 aaKnown RBP11.55□□□□□ -0.56
TRAV12-3-201ENST00000390442 ATP10BO94823 1461 aa11.55□□□□□ -0.56
TRAV12-3-201ENST00000390442 NUP153P49790 1475 aaKnown RBP11.54□□□□□ -0.56
TRAV12-3-201ENST00000390442 RAPGEF6Q8TEU7 1601 aa11.53□□□□□ -0.56
TRAV12-3-201ENST00000390442 KCNH8Q96L42 1107 aa11.53□□□□□ -0.56
TRAV12-3-201ENST00000390442 RANGAP1P46060 587 aaPredicted RBP11.51□□□□□ -0.57
TRAV12-3-201ENST00000390442 FBXO41Q8TF61 875 aa11.49□□□□□ -0.57
TRAV12-3-201ENST00000390442 U3KPZ7 1027 aaPredicted RBP11.49□□□□□ -0.57
TRAV12-3-201ENST00000390442 LRRIQ1Q96JM4 1722 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms