RNA–Protein interactions for RNA: ENST00000389231.9

USP5-202, Transcript of ubiquitin specific peptidase 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP5, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-202ENST00000389231 LRRC9Q6ZRR7 1453 aa17.44■□□□□ 0.38
USP5-202ENST00000389231 FHAD1B1AJZ9 1412 aa17.43■□□□□ 0.38
USP5-202ENST00000389231 PHLDB1Q86UU1 1377 aa17.42■□□□□ 0.38
USP5-202ENST00000389231 RAD54L2Q9Y4B4 1467 aa17.42■□□□□ 0.38
USP5-202ENST00000389231 ATP1B4Q9UN42 357 aaPredicted RBP17.39■□□□□ 0.38
USP5-202ENST00000389231 SETD5Q9C0A6 1442 aa17.38■□□□□ 0.37
USP5-202ENST00000389231 FAM50AQ14320 339 aaKnown RBP17.38■□□□□ 0.37
USP5-202ENST00000389231 ABCA10Q8WWZ4 1543 aa17.38■□□□□ 0.37
USP5-202ENST00000389231 POLA1P09884 1462 aaPredicted RBP17.37■□□□□ 0.37
USP5-202ENST00000389231 DNMBPQ6XZF7 1577 aa17.36■□□□□ 0.37
USP5-202ENST00000389231 TOPBP1Q92547 1522 aa17.36■□□□□ 0.37
USP5-202ENST00000389231 FHOD3Q2V2M9 1422 aa17.35■□□□□ 0.37
USP5-202ENST00000389231 MAPKBP1O60336 1514 aa17.34■□□□□ 0.37
USP5-202ENST00000389231 NESP48681 1621 aa17.34■□□□□ 0.37
USP5-202ENST00000389231 PCF11O94913 1555 aaKnown RBP17.32■□□□□ 0.36
USP5-202ENST00000389231 CASKIN1Q8WXD9 1431 aa17.29■□□□□ 0.36
USP5-202ENST00000389231 SIN3AQ96ST3 1273 aa17.28■□□□□ 0.36
USP5-202ENST00000389231 FYCO1Q9BQS8 1478 aa17.28■□□□□ 0.36
USP5-202ENST00000389231 EFCAB5A4FU69 1503 aa17.27■□□□□ 0.35
USP5-202ENST00000389231 CFAP43Q8NDM7 1665 aa17.26■□□□□ 0.35
USP5-202ENST00000389231 AQRO60306 1485 aaKnown RBP eCLIP17.26■□□□□ 0.35
USP5-202ENST00000389231 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.24■□□□□ 0.35
USP5-202ENST00000389231 SUPT16HQ9Y5B9 1047 aaKnown RBP17.22■□□□□ 0.35
USP5-202ENST00000389231 CUL7Q14999 1698 aa17.22■□□□□ 0.35
USP5-202ENST00000389231 TDRD9Q8NDG6 1382 aaKnown RBP17.22■□□□□ 0.35
USP5-202ENST00000389231 FMN1Q68DA7 1419 aa17.22■□□□□ 0.35
USP5-202ENST00000389231 URB2Q14146 1524 aaKnown RBP17.22■□□□□ 0.35
USP5-202ENST00000389231 TIMELESSQ9UNS1 1208 aa17.2■□□□□ 0.34
USP5-202ENST00000389231 FGD6Q6ZV73 1430 aa17.17■□□□□ 0.34
USP5-202ENST00000389231 SNAPC4Q5SXM2 1469 aa17.16■□□□□ 0.34
USP5-202ENST00000389231 WDR97A6NE52 1622 aa17.16■□□□□ 0.34
USP5-202ENST00000389231 MTUS2Q5JR59 1369 aa17.16■□□□□ 0.34
USP5-202ENST00000389231 LAMC3Q9Y6N6 1575 aa17.16■□□□□ 0.34
USP5-202ENST00000389231 KCNH8Q96L42 1107 aa17.15■□□□□ 0.34
USP5-202ENST00000389231 PPP1R15AO75807 674 aaPredicted RBP17.15■□□□□ 0.34
USP5-202ENST00000389231 GAPVD1Q14C86 1478 aa17.14■□□□□ 0.33
USP5-202ENST00000389231 CTTNBP2Q8WZ74 1663 aa17.14■□□□□ 0.33
USP5-202ENST00000389231 DDX10Q13206 875 aaKnown RBP17.14■□□□□ 0.33
USP5-202ENST00000389231 DNAJC5BQ9UF47 199 aa17.13■□□□□ 0.33
USP5-202ENST00000389231 PDS5BQ9NTI5 1447 aa17.12■□□□□ 0.33
USP5-202ENST00000389231 PTPRKQ15262 1439 aa17.11■□□□□ 0.33
USP5-202ENST00000389231 ABCA5Q8WWZ7 1642 aa17.1■□□□□ 0.33
USP5-202ENST00000389231 SAMD9Q5K651 1589 aa17.08■□□□□ 0.32
USP5-202ENST00000389231 GRIN2BQ13224 1484 aa17.07■□□□□ 0.32
USP5-202ENST00000389231 HIRIP3Q9BW71 556 aaPredicted RBP17.07■□□□□ 0.32
USP5-202ENST00000389231 HFM1A2PYH4 1435 aa17.07■□□□□ 0.32
USP5-202ENST00000389231 NCOA2Q15596 1464 aa17.06■□□□□ 0.32
USP5-202ENST00000389231 CCDC18Q5T9S5 1454 aa17.05■□□□□ 0.32
USP5-202ENST00000389231 MYOM3Q5VTT5 1437 aa17.05■□□□□ 0.32
USP5-202ENST00000389231 UACAQ9BZF9 1416 aa17.04■□□□□ 0.32
USP5-202ENST00000389231 TSHZ2Q9NRE2 1034 aa17.03■□□□□ 0.32
USP5-202ENST00000389231 NAIPQ13075 1403 aa17.02■□□□□ 0.32
USP5-202ENST00000389231 TONSLQ96HA7 1378 aa17.02■□□□□ 0.32
USP5-202ENST00000389231 THOC2Q8NI27 1593 aaKnown RBP16.99■□□□□ 0.31
USP5-202ENST00000389231 PTPN23Q9H3S7 1636 aa16.99■□□□□ 0.31
USP5-202ENST00000389231 LRRIQ1Q96JM4 1722 aa16.98■□□□□ 0.31
USP5-202ENST00000389231 EHBP1L1Q8N3D4 1523 aa16.97■□□□□ 0.31
USP5-202ENST00000389231 TARBP1Q13395 1621 aaKnown RBP16.96■□□□□ 0.31
USP5-202ENST00000389231 UGGT2Q9NYU1 1516 aa16.95■□□□□ 0.3
USP5-202ENST00000389231 RRP7BPQ9NSQ0 103 aa16.95■□□□□ 0.3
USP5-202ENST00000389231 MAGI3Q5TCQ9 1506 aa16.95■□□□□ 0.3
USP5-202ENST00000389231 SUPT6HQ7KZ85 1726 aaKnown RBP16.95■□□□□ 0.3
USP5-202ENST00000389231 ARHGEF11O15085 1522 aa16.94■□□□□ 0.3
USP5-202ENST00000389231 CCER2I3L3R5 266 aa16.94■□□□□ 0.3
USP5-202ENST00000389231 ANP32CO43423 234 aa16.94■□□□□ 0.3
USP5-202ENST00000389231 CHIC2Q9UKJ5 165 aa16.94■□□□□ 0.3
USP5-202ENST00000389231 BCANQ96GW7 911 aa16.94■□□□□ 0.3
USP5-202ENST00000389231 KIF21AQ7Z4S6 1674 aa16.93■□□□□ 0.3
USP5-202ENST00000389231 FKBP8Q14318 412 aa16.89■□□□□ 0.29
USP5-202ENST00000389231 TCOF1Q13428 1488 aaKnown RBP16.89■□□□□ 0.29
USP5-202ENST00000389231 EPRSP07814 1512 aaKnown RBP16.89■□□□□ 0.29
USP5-202ENST00000389231 ARID3CA6NKF2 412 aa16.88■□□□□ 0.29
USP5-202ENST00000389231 TRIM52Q96A61 297 aa16.88■□□□□ 0.29
USP5-202ENST00000389231 ANP32EQ9BTT0 268 aa16.87■□□□□ 0.29
USP5-202ENST00000389231 IQGAP2Q13576 1575 aa16.87■□□□□ 0.29
USP5-202ENST00000389231 KDM5BQ9UGL1 1544 aa16.86■□□□□ 0.29
USP5-202ENST00000389231 HECW1Q76N89 1606 aa16.85■□□□□ 0.29
USP5-202ENST00000389231 MIA2Q96PC5 1412 aa16.84■□□□□ 0.29
USP5-202ENST00000389231 CDK13Q14004 1512 aaKnown RBP16.84■□□□□ 0.29
USP5-202ENST00000389231 DENND4BO75064 1496 aaPredicted RBP16.83■□□□□ 0.29
USP5-202ENST00000389231 AKNAQ7Z591 1439 aa16.83■□□□□ 0.28
USP5-202ENST00000389231 ADAMTS12P58397 1594 aa16.83■□□□□ 0.28
USP5-202ENST00000389231 MPHOSPH9Q99550 1183 aa16.83■□□□□ 0.28
USP5-202ENST00000389231 MRC2Q9UBG0 1479 aa16.82■□□□□ 0.28
USP5-202ENST00000389231 PBRM1Q86U86 1689 aa16.81■□□□□ 0.28
USP5-202ENST00000389231 NEFLP07196 543 aa16.81■□□□□ 0.28
USP5-202ENST00000389231 WDR62O43379 1518 aa16.8■□□□□ 0.28
USP5-202ENST00000389231 HSPA5P11021 654 aaKnown RBP16.79■□□□□ 0.28
USP5-202ENST00000389231 ZNF608Q9ULD9 1512 aaPredicted RBP16.77■□□□□ 0.28
USP5-202ENST00000389231 KDM6BO15054 1643 aa16.77■□□□□ 0.28
USP5-202ENST00000389231 FOXD1Q16676 465 aa16.77■□□□□ 0.27
USP5-202ENST00000389231 WASHC2AQ641Q2 1341 aa16.77■□□□□ 0.27
USP5-202ENST00000389231 L3MBTL2Q969R5 705 aa16.76■□□□□ 0.27
USP5-202ENST00000389231 GCC2Q8IWJ2 1684 aa16.75■□□□□ 0.27
USP5-202ENST00000389231 EIF4G2P78344 907 aaKnown RBP eCLIP16.75■□□□□ 0.27
USP5-202ENST00000389231 KIAA0586Q9BVV6 1533 aa16.75■□□□□ 0.27
USP5-202ENST00000389231 IFT140Q96RY7 1462 aa16.75■□□□□ 0.27
USP5-202ENST00000389231 ZNF644Q9H582 1327 aaPredicted RBP16.74■□□□□ 0.27
USP5-202ENST00000389231 DISP1Q96F81 1524 aa16.73■□□□□ 0.27
USP5-202ENST00000389231 ROCK1Q13464 1354 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms