RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 CCNB3Q8WWL7 1395 aa17.14■□□□□ 0.33
RAPGEF3-201ENST00000389212 RRBP1Q9P2E9 1410 aaKnown RBP17.12■□□□□ 0.33
RAPGEF3-201ENST00000389212 FAM50AQ14320 339 aaKnown RBP17.07■□□□□ 0.32
RAPGEF3-201ENST00000389212 DNAJC5BQ9UF47 199 aa17.05■□□□□ 0.32
RAPGEF3-201ENST00000389212 FHOD3Q2V2M9 1422 aa17.03■□□□□ 0.32
RAPGEF3-201ENST00000389212 PHLDB1Q86UU1 1377 aa17.02■□□□□ 0.32
RAPGEF3-201ENST00000389212 TIAM1Q13009 1591 aa17.02■□□□□ 0.31
RAPGEF3-201ENST00000389212 POLA1P09884 1462 aaPredicted RBP17.01■□□□□ 0.31
RAPGEF3-201ENST00000389212 RAB3GAP2Q9H2M9 1393 aa17.01■□□□□ 0.31
RAPGEF3-201ENST00000389212 TOPBP1Q92547 1522 aa17■□□□□ 0.31
RAPGEF3-201ENST00000389212 CLSPNQ9HAW4 1339 aa17■□□□□ 0.31
RAPGEF3-201ENST00000389212 ANP32EQ9BTT0 268 aa16.99■□□□□ 0.31
RAPGEF3-201ENST00000389212 LRRC9Q6ZRR7 1453 aa16.98■□□□□ 0.31
RAPGEF3-201ENST00000389212 DNMBPQ6XZF7 1577 aa16.97■□□□□ 0.31
RAPGEF3-201ENST00000389212 PCF11O94913 1555 aaKnown RBP16.96■□□□□ 0.31
RAPGEF3-201ENST00000389212 TDRD9Q8NDG6 1382 aaKnown RBP16.96■□□□□ 0.31
RAPGEF3-201ENST00000389212 ABCA10Q8WWZ4 1543 aa16.94■□□□□ 0.3
RAPGEF3-201ENST00000389212 SIN3AQ96ST3 1273 aa16.93■□□□□ 0.3
RAPGEF3-201ENST00000389212 FHAD1B1AJZ9 1412 aa16.93■□□□□ 0.3
RAPGEF3-201ENST00000389212 URB2Q14146 1524 aaKnown RBP16.9■□□□□ 0.3
RAPGEF3-201ENST00000389212 SETD5Q9C0A6 1442 aa16.89■□□□□ 0.29
RAPGEF3-201ENST00000389212 MAPKBP1O60336 1514 aa16.87■□□□□ 0.29
RAPGEF3-201ENST00000389212 MAP3K1Q13233 1512 aa16.87■□□□□ 0.29
RAPGEF3-201ENST00000389212 CFAP43Q8NDM7 1665 aa16.83■□□□□ 0.28
RAPGEF3-201ENST00000389212 HIRIP3Q9BW71 556 aaPredicted RBP16.82■□□□□ 0.28
RAPGEF3-201ENST00000389212 CASKIN1Q8WXD9 1431 aa16.81■□□□□ 0.28
RAPGEF3-201ENST00000389212 FYCO1Q9BQS8 1478 aa16.8■□□□□ 0.28
RAPGEF3-201ENST00000389212 ARID3CA6NKF2 412 aa16.8■□□□□ 0.28
RAPGEF3-201ENST00000389212 KCNH8Q96L42 1107 aa16.79■□□□□ 0.28
RAPGEF3-201ENST00000389212 MTUS2Q5JR59 1369 aa16.79■□□□□ 0.28
RAPGEF3-201ENST00000389212 GAPVD1Q14C86 1478 aa16.79■□□□□ 0.28
RAPGEF3-201ENST00000389212 CUL7Q14999 1698 aa16.78■□□□□ 0.28
RAPGEF3-201ENST00000389212 CTTNBP2Q8WZ74 1663 aa16.78■□□□□ 0.28
RAPGEF3-201ENST00000389212 EFCAB5A4FU69 1503 aa16.77■□□□□ 0.28
RAPGEF3-201ENST00000389212 LAMC3Q9Y6N6 1575 aa16.77■□□□□ 0.27
RAPGEF3-201ENST00000389212 FMN1Q68DA7 1419 aa16.75■□□□□ 0.27
RAPGEF3-201ENST00000389212 WDR97A6NE52 1622 aa16.75■□□□□ 0.27
RAPGEF3-201ENST00000389212 PDS5BQ9NTI5 1447 aa16.74■□□□□ 0.27
RAPGEF3-201ENST00000389212 DDX10Q13206 875 aaKnown RBP16.74■□□□□ 0.27
RAPGEF3-201ENST00000389212 SNAPC4Q5SXM2 1469 aa16.74■□□□□ 0.27
RAPGEF3-201ENST00000389212 FGD6Q6ZV73 1430 aa16.72■□□□□ 0.27
RAPGEF3-201ENST00000389212 KIF21AQ7Z4S6 1674 aa16.71■□□□□ 0.27
RAPGEF3-201ENST00000389212 ABCA5Q8WWZ7 1642 aa16.71■□□□□ 0.27
RAPGEF3-201ENST00000389212 PTPRKQ15262 1439 aa16.71■□□□□ 0.26
RAPGEF3-201ENST00000389212 AQRO60306 1485 aaKnown RBP eCLIP16.71■□□□□ 0.26
RAPGEF3-201ENST00000389212 CHIC2Q9UKJ5 165 aa16.69■□□□□ 0.26
RAPGEF3-201ENST00000389212 LRRIQ1Q96JM4 1722 aa16.67■□□□□ 0.26
RAPGEF3-201ENST00000389212 NCOA2Q15596 1464 aa16.66■□□□□ 0.26
RAPGEF3-201ENST00000389212 RRP7BPQ9NSQ0 103 aa16.65■□□□□ 0.26
RAPGEF3-201ENST00000389212 SAMD9Q5K651 1589 aa16.64■□□□□ 0.25
RAPGEF3-201ENST00000389212 CCDC18Q5T9S5 1454 aa16.64■□□□□ 0.25
RAPGEF3-201ENST00000389212 PPP1R15AO75807 674 aaPredicted RBP16.64■□□□□ 0.25
RAPGEF3-201ENST00000389212 GRIN2BQ13224 1484 aa16.63■□□□□ 0.25
RAPGEF3-201ENST00000389212 ANO8Q9HCE9 1232 aaPredicted RBP16.61■□□□□ 0.25
RAPGEF3-201ENST00000389212 MYOM3Q5VTT5 1437 aa16.61■□□□□ 0.25
RAPGEF3-201ENST00000389212 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.6■□□□□ 0.25
RAPGEF3-201ENST00000389212 TARBP1Q13395 1621 aaKnown RBP16.6■□□□□ 0.25
RAPGEF3-201ENST00000389212 MAGI3Q5TCQ9 1506 aa16.6■□□□□ 0.25
RAPGEF3-201ENST00000389212 TONSLQ96HA7 1378 aa16.6■□□□□ 0.25
RAPGEF3-201ENST00000389212 NAIPQ13075 1403 aa16.57■□□□□ 0.24
RAPGEF3-201ENST00000389212 HFM1A2PYH4 1435 aa16.57■□□□□ 0.24
RAPGEF3-201ENST00000389212 TRIM52Q96A61 297 aa16.57■□□□□ 0.24
RAPGEF3-201ENST00000389212 SUPT16HQ9Y5B9 1047 aaKnown RBP16.57■□□□□ 0.24
RAPGEF3-201ENST00000389212 PTPN23Q9H3S7 1636 aa16.56■□□□□ 0.24
RAPGEF3-201ENST00000389212 CDK13Q14004 1512 aaKnown RBP16.55■□□□□ 0.24
RAPGEF3-201ENST00000389212 SUPT6HQ7KZ85 1726 aaKnown RBP16.54■□□□□ 0.24
RAPGEF3-201ENST00000389212 UACAQ9BZF9 1416 aa16.54■□□□□ 0.24
RAPGEF3-201ENST00000389212 ZNF608Q9ULD9 1512 aaPredicted RBP16.54■□□□□ 0.24
RAPGEF3-201ENST00000389212 EHBP1L1Q8N3D4 1523 aa16.53■□□□□ 0.24
RAPGEF3-201ENST00000389212 FOXD1Q16676 465 aa16.52■□□□□ 0.24
RAPGEF3-201ENST00000389212 TIMELESSQ9UNS1 1208 aa16.52■□□□□ 0.23
RAPGEF3-201ENST00000389212 PBRM1Q86U86 1689 aa16.52■□□□□ 0.23
RAPGEF3-201ENST00000389212 UGGT2Q9NYU1 1516 aa16.51■□□□□ 0.23
RAPGEF3-201ENST00000389212 IQGAP2Q13576 1575 aa16.5■□□□□ 0.23
RAPGEF3-201ENST00000389212 TSHZ2Q9NRE2 1034 aa16.49■□□□□ 0.23
RAPGEF3-201ENST00000389212 EPRSP07814 1512 aaKnown RBP16.49■□□□□ 0.23
RAPGEF3-201ENST00000389212 CCDC136Q96JN2 1154 aa16.49■□□□□ 0.23
RAPGEF3-201ENST00000389212 BCANQ96GW7 911 aa16.48■□□□□ 0.23
RAPGEF3-201ENST00000389212 MRC2Q9UBG0 1479 aa16.48■□□□□ 0.23
RAPGEF3-201ENST00000389212 ADAMTS12P58397 1594 aa16.48■□□□□ 0.23
RAPGEF3-201ENST00000389212 THOC2Q8NI27 1593 aaKnown RBP16.47■□□□□ 0.23
RAPGEF3-201ENST00000389212 ZNF644Q9H582 1327 aaPredicted RBP16.46■□□□□ 0.23
RAPGEF3-201ENST00000389212 ANP32CO43423 234 aa16.46■□□□□ 0.23
RAPGEF3-201ENST00000389212 HECW1Q76N89 1606 aa16.45■□□□□ 0.22
RAPGEF3-201ENST00000389212 KDM6BO15054 1643 aa16.45■□□□□ 0.22
RAPGEF3-201ENST00000389212 FBLN2P98095 1184 aa16.45■□□□□ 0.22
RAPGEF3-201ENST00000389212 ARHGEF11O15085 1522 aa16.44■□□□□ 0.22
RAPGEF3-201ENST00000389212 WDR62O43379 1518 aa16.41■□□□□ 0.22
RAPGEF3-201ENST00000389212 MPHOSPH9Q99550 1183 aa16.41■□□□□ 0.22
RAPGEF3-201ENST00000389212 DENND4BO75064 1496 aaPredicted RBP16.4■□□□□ 0.22
RAPGEF3-201ENST00000389212 TCOF1Q13428 1488 aaKnown RBP16.38■□□□□ 0.21
RAPGEF3-201ENST00000389212 HSPA5P11021 654 aaKnown RBP16.38■□□□□ 0.21
RAPGEF3-201ENST00000389212 KDM5BQ9UGL1 1544 aa16.37■□□□□ 0.21
RAPGEF3-201ENST00000389212 FKBP8Q14318 412 aa16.37■□□□□ 0.21
RAPGEF3-201ENST00000389212 ZNF777Q9ULD5 760 aaPredicted RBP16.36■□□□□ 0.21
RAPGEF3-201ENST00000389212 IFT140Q96RY7 1462 aa16.36■□□□□ 0.21
RAPGEF3-201ENST00000389212 L3MBTL2Q969R5 705 aa16.36■□□□□ 0.21
RAPGEF3-201ENST00000389212 DISP1Q96F81 1524 aa16.36■□□□□ 0.21
RAPGEF3-201ENST00000389212 CHMP7Q8WUX9 453 aaPredicted RBP16.35■□□□□ 0.21
RAPGEF3-201ENST00000389212 NUP153P49790 1475 aaKnown RBP16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms